HsaEX0073503 @ hg19

Exon Skipping

Gene

ENSG00000197937 | ZNF347

Description

zinc finger protein 347 [Source:HGNC Symbol;Acc:16447]

Coordinates

chr19:53643171-53657046:-

Coord C1 exon

chr19:53656986-53657046

Coord A exon

chr19:53651934-53652062

Coord C2 exon

chr19:53643171-53645809

Length

129 bp

Sequences

Splice sites

3' ss Seq

TCCTTTCTTTTCATAAGCAGGAA

3' ss Score

7.78

5' ss Seq

CAGGTAAGA

5' ss Score

10.77

Exon sequences

Seq C1 exon

GAAGAACCCTTGAAGAAGAGGAAGAGGAAAGAAAGACAAGTCAGGCATGGCTCTCACCCAG

Seq A exon

GAATCTCTTGTTTTGACCTCAGTATTATCTCTATGTTGGAGCAAGGGAAGGAGCCTTTCACTTTGGAGAGCCAAGTACAAATAGCAGGAAACCCAGATGGATGGGAATGGATCAAAGCTGTGATCACAG

Seq C2 exon

CTCTCTCTTCCGAATTTGTAATGAAAGATTTACTACACAAAGGGAAGAGTAATACAGGAGAAGTATTCCAAACAGTGATGTTGGAAAGACAGGAAAGCCAAGACATTGAAGGATGTTCCTTCAGGGAAGTCCAGAAAAATACACATGGCCTTGAGTATCAATGCAGAGATGCTGAAGGAAATTACAAAGGAGTGCTTTTGACCCAAGAAGGCAATCTCACTCATGGAAGAGATGAACATGATAAAAGAGATGCAAGAAACAAGCTTATTAAAAATCAGCTTGGATTAAGCCTTCAGTCACATCTGCCTGAACTGCAGCTTTTTCAATATGAAGGGAAAATTTATGAATGTAATCAGGTTGAGAAGTCTTTCAACAATAATTCCTCAGTTTCACCACCTCAACAAATGCCTTATAATGTCAAAACCCACATTTCTAAGAAATATCTCAAAGATTTTATCTCTTCTTTATTACTCACACAGGGGCAAAAAGCAAATAATTGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000197937_MULTIEX1-2/2=C1-C2

Average complexity

C2*

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.138 A=0.023 C2=0.130

Domain overlap (PFAM):

C1:

NO

A:

PF088545=DUF1824=PU(19.2=57.6)

C2:

PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.3),PF0013017=C1_1=WD(100=7.3),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.3),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.5),PF0013017=C1_1=WD(100=7.1),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.5),PF134651=zf-H2C2_2=WD(100=3.3)

Main Inclusion Isoform:

ENSP00000469338