HsaEX0073585 @ hg38

Exon Skipping

Gene

ENSG00000186812 | ZNF397

Description

zinc finger protein 397 [Source:HGNC Symbol;Acc:HGNC:18818]

Coordinates

chr18:35243152-35254402:+

Coord C1 exon

chr18:35243152-35243474

Coord A exon

chr18:35245262-35245351

Coord C2 exon

chr18:35254232-35254402

Length

90 bp

Sequences

Splice sites

3' ss Seq

TTTGCTACTTATTGTTTCAGATT

3' ss Score

9.03

5' ss Seq

TTAGTGAGC

5' ss Score

2.31

Exon sequences

Seq C1 exon

GTCCCAGCTAGTCCACAGGGACCAGCAGTGCCATGGAAGGATTTAACATGTCTCAGAGCATCCCAAGAGTCAACAGACATCCACCTCCAGCCCTTAAAGACACAGCTGAAATCCTGGAAACCATGCCTTTCCCCTAAAAGTGGTGAGGAATGGGAAATCATCTGGAAACTCTTGACACTTAGGCCTCTGTTTTTGAGAATGCAGAATTAATTGCACTTGACAAACTTGCCACATGTGAGCATCACCTTTATTATTCTAAACCAGAGGTGCTCGCTTTAGCGGCTTTGTATTCACCCCTCATGAATTGCTGTCAGCCCTCCTGT

Seq A exon

ATTGTGAGAACAGTGAAACAGCAACAAAAGAGGGCATCTCAGAAGAAAAATCACAGGGACTCCCTCAGGAACCTTCATTTCGAGGAATTA

Seq C2 exon

AGTTGTCCAGACCTCCCAAAGCTTCTTCAGCTATCCGTTGGGAATGTGTTTCTCCAGGAAGTTTTCCCGGCGATATCATAGCTGCTGAGGCTACACATTCAACAATTTCTTGCTTTGCCATCAACACTTTGCCAGCCACCATCCTGCCATCTAAAAATGTGAATAGAAAGT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000186812_MULTIEX2-1/2=C1-C2

Average complexity

S*

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.144 A=0.348 C2=0.026

Domain overlap (PFAM):

C1:

PF0202312=SCAN=PD(0.1=0.0)

A:

PF134651=zf-H2C2_2=WD(100=7.1),PF134651=zf-H2C2_2=WD(100=7.4),PF134651=zf-H2C2_2=WD(100=7.4),PF134651=zf-H2C2_2=WD(100=7.4),PF134651=zf-H2C2_2=WD(100=7.4),PF134651=zf-H2C2_2=WD(100=7.1),PF134651=zf-H2C2_2=WD(100=7.4),PF0009621=zf-C2H2=WD(100=6.6)

C2:

NO

Main Inclusion Isoform:

ENSP00000331577