HsaEX0073917 @ hg19

Exon Skipping

Gene

ENSG00000204519 | ZNF551

Description

zinc finger protein 551 [Source:HGNC Symbol;Acc:25108]

Coordinates

chr19:58193347-58199396:+

Coord C1 exon

chr19:58193347-58193612

Coord A exon

chr19:58196630-58196753

Coord C2 exon

chr19:58197849-58199396

Length

124 bp

Sequences

Splice sites

3' ss Seq

AACTATTCCTGCTGTGACAGGGT

3' ss Score

4.66

5' ss Seq

TGGGTAAGG

5' ss Score

9.08

Exon sequences

Seq C1 exon

AACTTCCGGCGTCCTCCTCGTGGCGGTCATTTTGGCCTCTGTCCTGTTTGTCCAGCCCGCCAGTTTCTGCAGTGGAGGTCGCGACTGAGGGACGGGACAGAGAAGTCGCGAAAGTGGGCCAGAGGTTCTGCGACACCACCTCGGGTGAGCTGCGCCAGGCCCGGGATAGGGACTGTTGTGTTCGAATGCCCGCCCCGGTCGGCCGCCGCTCCCCGCCTAGTCCACGGAGCTCAATGGCGGCAGTCGCGCTGAGGGACTCGGCTCAG

Seq A exon

GGTATGACCTTTGAGGATGTGGCCATTTATTTCTCCCAAGAAGAGTGGGAGCTCCTTGATGAGTCTCAGAGGTTCCTGTACTGCGATGTGATGCTGGAGAACTTTGCACATGTAACATCCCTGG

Seq C2 exon

GTTATTGCCATGGAATGGAGAATGAGGCGATAGCTTCTGAGCAGAGTGTATCTATACAGGTCAGGACTTCTAAGGGCAATACACCCACCCAGAAAACTCACCTCAGTGAGATTAAGATGTGTGTCCCAGTCTTGAAAGACATTTTGCCTGCGGCTGAGCACCAAACCACATCCCCTGTGCAAAAGTCATACTTGGGTAGCACAAGCATGAGAGGCTTCTGCTTCAGTGCTGACCTTCACCAGCATCAAAAGCATTACAATGAAGAAGAGCCCTGGAAAAGGAAGGTGGATGAGGCTACATTTGTGACCGGCTGCAGATTCCATGTGTTGAATTATTTCACCTGTGGGGAGGCCTTCCCAGCCCCCACGGACCTACTCCAACACGAAGCCACTCCCAGTGGTGAGGAGCCACACAGTAGCAGCAGCAAGCATATACAGGCATTTTTCAATGCAAAAAGTTATTACAAGTGGGGTGAATACAGAAAAGCTTCAAGCCACAAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000204519-'0-2,'0-0,1-2

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.526 A=0.000 C2=0.130

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=100.0)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.1),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3)

Main Inclusion Isoform:

ENSP00000282296