HsaEX0074364 @ hg19
Exon Skipping
Gene
ENSG00000197362 | ZNF786
Description
zinc finger protein 786 [Source:HGNC Symbol;Acc:21806]
Coordinates
chr7:148771478-148787874:-
Coord C1 exon
chr7:148787715-148787874
Coord A exon
chr7:148777683-148777809
Coord C2 exon
chr7:148771478-148771630
Length
127 bp
Sequences
Splice sites
3' ss Seq
TCTTATGTCTACAATTTCAGCTA
3' ss Score
7.24
5' ss Seq
TAGGTAAGA
5' ss Score
9.14
Exon sequences
Seq C1 exon
GCTGCGTTTGGGGGCCACCCGGGCTGTGCGTGGGAGTCGGGTTGGGGCGGAGCGGAGGGGAGTCAGTGCGCAGCAGGGCAGGTTCCTGCGGAGCCGCCGGAGACGGTCGGGTTTGCCAGGGCCGGGCGGGACCGCGGGGACCATGGCGGAGCCGCCTCGG
Seq A exon
CTACCTCTGACTTTTGAGGATGTTGCTATTTATTTCTCCGAGCAAGAATGGCAGGATCTAGAGGCATGGCAGAAGGAACTTTACAAGCATGTGATGAGAAGCAATTATGAGACTCTCGTCTCTCTAG
Seq C2 exon
ATGATGGACTTCCAAAACCAGAACTAATATCCTGGATTGAACACGGGGGAGAGCCCTTCAGGAAATGGAGAGAATCACAGAAATCAGGAAACATAATTTGCTCCTCTGTTGATATGCATTTTGATCCAGGTTTTGAGGAACAGCTGTTTTGGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000197362-'0-4,'0-1,2-4
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.034
Domain overlap (PFAM):
C1:
NO
A:
PF0135222=KRAB=WD(100=95.3)
C2:
PF0135222=KRAB=PD(0.1=0.0)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GAGCGGAGGGGAGTCAGTG
R:
ACAGCTGTTCCTCAAAACCTGG
Band lengths:
258-385
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)