HsaEX0074364 @ hg38
Exon Skipping
Gene
ENSG00000197362 | ZNF786
Description
zinc finger protein 786 [Source:HGNC Symbol;Acc:HGNC:21806]
Coordinates
chr7:149074386-149090782:-
Coord C1 exon
chr7:149090623-149090782
Coord A exon
chr7:149080591-149080717
Coord C2 exon
chr7:149074386-149074538
Length
127 bp
Sequences
Splice sites
3' ss Seq
TCTTATGTCTACAATTTCAGCTA
3' ss Score
7.24
5' ss Seq
TAGGTAAGA
5' ss Score
9.14
Exon sequences
Seq C1 exon
GCTGCGTTTGGGGGCCACCCGGGCTGTGCGTGGGAGTCGGGTTGGGGCGGAGCGGAGGGGAGTCAGTGCGCAGCAGGGCAGGTTCCTGCGGAGCCGCCGGAGACGGTCGGGTTTGCCAGGGCCGGGCGGGACCGCGGGGACCATGGCGGAGCCGCCTCGG
Seq A exon
CTACCTCTGACTTTTGAGGATGTTGCTATTTATTTCTCCGAGCAAGAATGGCAGGATCTAGAGGCATGGCAGAAGGAACTTTACAAGCATGTGATGAGAAGCAATTATGAGACTCTCGTCTCTCTAG
Seq C2 exon
ATGATGGACTTCCAAAACCAGAACTAATATCCTGGATTGAACACGGGGGAGAGCCCTTCAGGAAATGGAGAGAATCACAGAAATCAGGAAACATAATTTGCTCCTCTGTTGATATGCATTTTGATCCAGGTTTTGAGGAACAGCTGTTTTGGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000197362-'0-9,'0-3,7-9
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.030
Domain overlap (PFAM):
C1:
NO
A:
PF0135222=KRAB=WD(100=95.3)
C2:
PF0135222=KRAB=PD(0.1=0.0)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GAGCGGAGGGGAGTCAGTG
R:
ACAGCTGTTCCTCAAAACCTGG
Band lengths:
258-385
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development