Special

HsaEX0074482 @ hg38

Exon Skipping

Gene
Description
zinc finger protein 91 [Source:HGNC Symbol;Acc:HGNC:13166]
Coordinates
chr19:23357696-23374764:-
Coord C1 exon
chr19:23374638-23374764
Coord A exon
chr19:23373742-23373837
Coord C2 exon
chr19:23357696-23362725
Length
96 bp
Sequences
Splice sites
3' ss Seq
AGTTATTTTTAATAAAACAGGTA
3' ss Score
4.34
5' ss Seq
CAGGTAGGT
5' ss Score
10.28
Exon sequences
Seq C1 exon
GGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTCCGGAGGAGTGGCAATGTCTGGACACTGCACAGCAGAATTTATATAGGAATGTGATGTTAGAGAACTACAGAAACCTGGCCTTCCTGG
Seq A exon
GTATTGCTCTCTCTAAGCCAGACCTGATTACTTATCTGGAGCAAGGAAAAGAGCCCTGGAATATGAAGCAACATGAGATGGTGGATGAACCCACAG
Seq C2 exon
GTATATGTCCTCATTTTCCTCAAGACTTTTGGCCAGAGCAGAGCATGGAAGATTCTTTTCAAAAAGTATTACTGAGAAAATATGAAAAATGTGGACATGAGAATTTACAGTTAAGAAAAGGTTGTAAAAGTGTGGATGAGTGTAAGGTGCACAAAGAAGGTTATAATAAACTTAACCAGTGTCTCACAACTGCCCAGAGCAAAGTATTTCAATGTGGGAAATATTTGAAAGTCTTCTATAAATTTTTAAATTCAAACAGACATACGATAAGACATACTGGAAAGAAATGCTTCAAATGTAAAAAATGTGTCAAGTCATTTTGCATCCGTTTACACAAAACCCAACATAAATGCGTTTATATTACAGAGAAGTCCTGTAAATGTAAAGAATGTGAAAAAACCTTTCATTGGTCCTCAACCCTTACTAATCATAAGGAAATTCATACTGAAGATAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAGCAGCTCTCA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000167232_MULTIEX1-3/11=2-4
Average complexity
S*
Mappability confidence:
85%=100=85%
Protein Impact

Alternative protein isoforms (Ref)

Show structural model
Features
Disorder rate (Iupred):
  C1=0.000 A=0.205 C2=0.031
Domain overlap (PFAM):

C1:
PF0135222=KRAB=WD(100=95.3)
A:
PF0135222=KRAB=PD(0.1=0.0)
C2:
PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF0009621=zf-C2H2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3),PF134651=zf-H2C2_2=WD(100=2.3)


Main Inclusion Isoform:


Main Skipping Isoform:


Other Inclusion Isoforms:


Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TGACATTTAGGGATGTGGCCA
R:
CATGCTCTGCTCTGGCCAAAA
Band lengths:
167-263
Functional annotations
There are 0 annotated functions for this event


GENOMIC CONTEXT[edit]

INCLUSION PATTERN[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development