HsaEX1044875 @ hg38

Exon Skipping

Gene

ENSG00000160321 | ZNF208

Description

zinc finger protein 208 [Source:HGNC Symbol;Acc:HGNC:12999]

Coordinates

chr19:21971191-22010943:-

Coord C1 exon

chr19:22010792-22010943

Coord A exon

chr19:21987216-21987311

Coord C2 exon

chr19:21971191-21974807

Length

96 bp

Sequences

Splice sites

3' ss Seq

GTTCATTTTTAATAAAACAGGTA

3' ss Score

4.86

5' ss Seq

CAGGTAGGT

5' ss Score

10.28

Exon sequences

Seq C1 exon

CCTTTGTCTCTCGCTGCAGCCGGAGGTCAAGGTCTCGTCCTTACTGCTGTGTGTCCTCTGCTCCTAGAGTCCCAGCCTCTGTGGCCCTATGACCTGCAGGTATTGGGAGATCCACAACTAAGTCGCCAGGACCCCCTGGAAGCCTAGAAATG

Seq A exon

GTATTGCTGCCTTTAAGCCAGACCTGATCATTTTTCTGGAGGAAGGAAAAGAGTCCTGGAATATGAAGAGACATGAGATGGTGGAAGAATCCCCAG

Seq C2 exon

TTATATGTTCTCATTTTGCTCAAGATCTTTGGCCAGAGCAGGGCATAGAAGATTCTTTCCAAAAAGTGATATTGAGAAGGTATGAAAAATGTGGACATGAGAATTTACACTTAAAAATTGGTTATACCAATGTGGATGAGTGTAAGGTGCACAAAGAAGGTTATAATAAACTTAACCAGAGTTTGACAACTACACAGAGCAAAGTATTTCAACGTGGCAAATATGCAAATGTCTTTCATAAATGTTCAAATTCAAACAGACATAAGATAAGGCATACTGGAAAGAAACATTTGCAATGTAAAGAATACGTCAGATCATTTTGCATGCTTTCACACCTATCTCAACATAAAAGAATTTATACTAGAGAGAATTCCTACAAATGTGAAGAAGGTGGCAAAGCTTTTAACTGGTCCTCAACCCTTACTTATTATAAGAGTGCTCATACTGGAGAGAAACCCTACAGATGTAAAGAATGTGGCAAAGCCTTTAGTAAGTTCTCA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000160321_MULTIEX1-4/6=C1-6

Average complexity

C3*

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.049 C2=0.000

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.0),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.0),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.0),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.0),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.0),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.0),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.0),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.0),PF134651=zf-H2C2_2=WD(100=2.1),PF134651=zf-H2C2_2=WD(100=2.0),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.0)

Main Inclusion Isoform:

ENSP00000380315