HsaEX1046528 @ hg38
Exon Skipping
Gene
ENSG00000165695 | AK8
Description
adenylate kinase 8 [Source:HGNC Symbol;Acc:HGNC:26526]
Coordinates
chr9:132826854-132828726:-
Coord C1 exon
chr9:132828645-132828726
Coord A exon
chr9:132828013-132828084
Coord C2 exon
chr9:132826854-132827054
Length
72 bp
Sequences
Splice sites
3' ss Seq
TCCTTTTCTTCTCTGCCCAGTTG
3' ss Score
9.23
5' ss Seq
GAGGTATGG
5' ss Score
8.98
Exon sequences
Seq C1 exon
GGCTGGATTCTGGATGGCATCCCTGAGACGCGTGAGCAGGCTCTGAGGATCCAGACCCTGGGGATCACACCCAGACACGTCA
Seq A exon
TTGTGCTGAGTGCTCCAGACACGGTCCTGATCGAGAGAAACTTGGGGAAGAGAATCGACCCTCAAACTGGAG
Seq C2 exon
AGATTTATCACACCACCTTTGACTGGCCACCCGAATCTGAAATCCAGAACCGTCTCATGGTGCCAGAGGACATCTCAGAGCTGGAGACGGCTCAGAAACTGCTGGAGTATCATAGGAACATCGTCAGGGTCATTCCCTCCTACCCCAAAATCCTCAAAGTCATCAGTGCTGACCAGCCATGTGTGGACGTCTTCTACCAGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000165695_MULTIEX1-8/13=7-10
Average complexity
S*
Mappability confidence:
90%=90=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.080 C2=0.015
Domain overlap (PFAM):
C1:
PF0040617=ADK=FE(15.3=100)
A:
PF0040617=ADK=FE(13.6=100)
C2:
PF0040617=ADK=PD(29.4=76.5)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GGCTGGATTCTGGATGGCATC
R:
CCGTCTCCAGCTCTGAGATGT
Band lengths:
172-244
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains