HsaEX6010726 @ hg38
Exon Skipping
Gene
ENSG00000157680 | DGKI
Description
diacylglycerol kinase iota [Source:HGNC Symbol;Acc:HGNC:2855]
Coordinates
chr7:137571175-137577284:-
Coord C1 exon
chr7:137577222-137577284
Coord A exon
chr7:137572765-137572838
Coord C2 exon
chr7:137571175-137571286
Length
74 bp
Sequences
Splice sites
3' ss Seq
TTCTGTTTTCATTGTTTCAGTGT
3' ss Score
9.92
5' ss Seq
CAGGTAGGC
5' ss Score
9.88
Exon sequences
Seq C1 exon
GCAGCTTTTTCTGACTTCCTACAGAGAAGTTCTAGAGATCTATCCAAACATGTTAAAGTTGTT
Seq A exon
TGTGATGGAACAGATCTCACCCCAAAGATTCAGGAACTGAAGTTCCAGTGTATAGTATTTTTAAATATACCCAG
Seq C2 exon
ATATTGTGCTGGCACAATGCCCTGGGGAAACCCAGGTGATCACCATGATTTCGAACCTCAGCGTCATGATGATGGTTATATTGAAGTCATTGGATTTACCATGGCCTCTTTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000157680-'57-42,'57-41,58-42
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.207
Domain overlap (PFAM):
C1:
PF0060914=DAGK_acc=FE(12.7=100)
A:
PF0060914=DAGK_acc=FE(15.2=100)
C2:
PF0060914=DAGK_acc=FE(23.4=100)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GCAGCTTTTTCTGACTTCCTACA
R:
TATAACCATCATCATGACGCTGAGG
Band lengths:
143-217
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains