HsaEX6011154 @ hg38
Exon Skipping
Gene
ENSG00000196453 | ZNF777
Description
zinc finger protein 777 [Source:HGNC Symbol;Acc:HGNC:22213]
Coordinates
chr7:149450999-149456037:-
Coord C1 exon
chr7:149455177-149456037
Coord A exon
chr7:149454111-149454237
Coord C2 exon
chr7:149450999-149451112
Length
127 bp
Sequences
Splice sites
3' ss Seq
GAGTTATTGTGTGGTTTCAGGTC
3' ss Score
8.13
5' ss Seq
TGGGTAAGG
5' ss Score
9.08
Exon sequences
Seq C1 exon
CCCTTCTCTCCCACTCCCCCCACCACCAGGAAGCCCCCGTTCACTCCCCTGAAGCTCCTGAGAAAGACCCCCTGACCCTTTCCCCAACAGTTCCCGAGACTGACATGGACCCGCTGCTCCAGAGCCCGGTTTCCCAAAAGGACACCCCTTTCCAGATCTCTTCTGCAGTCCAGAAGGAACAGCCGCTCCCCACGGCAGAGATCACCCGCTTGGCTGTGTGGGCTGCCGTCCAAGCAGTGGAGAGGAAGCTGGAGGCCCAGGCCATGAGGCTACTGACCCTGGAAGGCAGGACGGGGACAAATGAAAAGAAGATAGCCGACTGCGAGAAGACAGCCGTGGAGTTCGCGAACCATCTGGAGAGCAAGTGGGTCGTGTTGGGGACCCTGCTGCAGGAGTATGGGCTGCTGCAGAGGCGGCTGGAGAACATGGAGAACCTGCTGAAAAACAGAAATTTCTGGATCCTGCGGCTGCCCCCCGGCAGCAATGGAGAAGTTCCCAAG
Seq A exon
GTCCCTGTCACATTTGATGATGTTGCTGTGCACTTCTCGGAGCAGGAGTGGGGAAACCTGTCTGAGTGGCAGAAGGAGCTCTACAAGAACGTGATGAGGGGCAACTACGAGTCCCTGGTTTCCATGG
Seq C2 exon
ACTATGCAATTTCCAAACCAGACCTCATGTCACAGATGGAGCGCGGGGAGCGGCCCACCATGCAGGAGCAGGAAGACTCTGAGGAGGGCGAAACGCCGACAGATCCCAGTGCTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000196453-'6-4,'6-3,7-4
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.681 A=0.023 C2=0.846
Domain overlap (PFAM):
C1:
PF124173=DUF3669=WD(100=28.4)
A:
PF0135222=KRAB=WD(100=95.3)
C2:
PF0135222=KRAB=PD(0.1=0.0)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GTTCGCGAACCATCTGGAGAG
R:
TTTCGCCCTCCTCAGAGTCTT
Band lengths:
253-380
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains