HsaEX6021129 @ hg19

Exon Skipping

Gene

ENSG00000007174 | DNAH9

Description

dynein, axonemal, heavy chain 9 [Source:HGNC Symbol;Acc:2953]

Coordinates

chr17:11737955-11772570:+

Coord C1 exon

chr17:11737955-11738215

Coord A exon

chr17:11757320-11757745

Coord C2 exon

chr17:11772451-11772570

Length

426 bp

Sequences

Splice sites

3' ss Seq

ACCTCCTTCTCTTTTCCCAGACC

3' ss Score

11.06

5' ss Seq

GCTGTGAGT

5' ss Score

7.39

Exon sequences

Seq C1 exon

GTGGATGATCTGAAAGCAAAGCTGGCTGCCCAGGAAGTAGAGCTGAAGCAGAAAAATGAAGATGCAGACAAACTGATTCAGGTCGTGGGTGTGGAGACTGACAAAGTGAGCAGAGAGAAAGCCATGGCAGATGAAGAGGAGCAGAAGGTGGCCGTCATCATGCTAGAGGTGAAACAGAAGCAGAAGGACTGTGAGGAGGACCTGGCAAAGGCTGAGCCAGCACTCACAGCAGCGCAGGCAGCTCTCAACACCCTGAACAAG

Seq A exon

ACCAACCTGACAGAGCTGAAGTCATTTGGCTCTCCGCCTCTGGCCGTCAGCAATGTCAGCGCTGCGGTGATGGTACTGATGGCTCCCAGGGGTAGGGTGCCCAAGGACCGGAGCTGGAAGGCTGCTAAGGTCACCATGGCCAAAGTGGATGGCTTCCTGGACTCGCTAATAAACTTCAACAAAGAGAACATTCACGAGAACTGCCTCAAAGCCATCAGGCCGTATCTGCAAGACCCCGAGTTCAATCCTGAGTTTGTGGCCACCAAATCCTATGCGGCTGCAGGCCTCTGCTCCTGGGTCATCAATATTGTGAGATTTTATGAGGTGTTCTGTGATGTGGAACCCAAGCGCCAGGCACTGAACAAAGCCACCGCGGACCTCACAGCTGCCCAGGAGAAGCTGGCTGCCATCAAAGCCAAGATCGCT

Seq C2 exon

CACCTTAATGAAAACCTGGCAAAGCTCACAGCCAGGTTTGAGAAAGCAACAGCAGACAAACTCAAATGTCAGCAAGAAGCCGAAGTGACCGCAGTCACCATCTCCCTTGCCAACCGCCTG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000007174-'48-50,'48-49,49-50=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.115 A=0.000 C2=0.000

Domain overlap (PFAM):

C1:

PF127772=MT=FE(25.0=100)

A:

PF127772=MT=FE(41.0=100)

C2:

PF127772=MT=FE(22.8=100),PF083176=Spc7=PD(52.2=87.5),PF0218511=HR1=PD(37.5=45.0),PF0102514=GrpE=FE(45.3=100),PF101474=CR6_interact=PD(44.4=80.0),PF097314=Mitofilin=FE(47.6=100)

Main Inclusion Isoform:

ENSP00000262442