HsaEX6063679 @ hg38
Exon Skipping
Gene
ENSG00000165695 | AK8
Description
adenylate kinase 8 [Source:HGNC Symbol;Acc:HGNC:26526]
Coordinates
chr9:132823205-132828084:-
Coord C1 exon
chr9:132828013-132828084
Coord A exon
chr9:132826854-132827054
Coord C2 exon
chr9:132823205-132823336
Length
201 bp
Sequences
Splice sites
3' ss Seq
GTGCACCTCTCTCCTTGTAGAGA
3' ss Score
9.54
5' ss Seq
AGGGTAAAC
5' ss Score
4.45
Exon sequences
Seq C1 exon
TTGTGCTGAGTGCTCCAGACACGGTCCTGATCGAGAGAAACTTGGGGAAGAGAATCGACCCTCAAACTGGAG
Seq A exon
AGATTTATCACACCACCTTTGACTGGCCACCCGAATCTGAAATCCAGAACCGTCTCATGGTGCCAGAGGACATCTCAGAGCTGGAGACGGCTCAGAAACTGCTGGAGTATCATAGGAACATCGTCAGGGTCATTCCCTCCTACCCCAAAATCCTCAAAGTCATCAGTGCTGACCAGCCATGTGTGGACGTCTTCTACCAGG
Seq C2 exon
CTCTGACCTATGTCCAAAGCAACCATCGTACTAATGCCCCGTTCACCCCGAGGGTGCTGCTGCTCGGGCCTGTGGGCAGTGGGAAAAGTCTGCAGGCCGCCCTCCTGGCCCAGAAATACAGGCTTGTCAATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000165695_MULTIEX1-10/13=8-11
Average complexity
S
Mappability confidence:
92%=92=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.080 A=0.015 C2=0.000
Domain overlap (PFAM):
C1:
PF0040617=ADK=FE(13.6=100)
A:
PF0040617=ADK=PD(29.4=76.5)
C2:
PF0040617=ADK=PU(13.4=53.3)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TTGTGCTGAGTGCTCCAGACA
R:
CATTGACAAGCCTGTATTTCTGGG
Band lengths:
204-405
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains