HsaEX6077821 @ hg19

Exon Skipping

Gene

ENSG00000078814 | MYH7B

Description

myosin, heavy chain 7B, cardiac muscle, beta [Source:HGNC Symbol;Acc:15906]

Coordinates

chr20:33589234-33590240:+

Coord C1 exon

chr20:33589234-33589329

Coord A exon

chr20:33589751-33589888

Coord C2 exon

chr20:33589962-33590240

Length

138 bp

Sequences

Splice sites

3' ss Seq

GGCCCTGTGTGTGCCCCCAGGAG

3' ss Score

9.97

5' ss Seq

AAGGTGAGG

5' ss Score

9.16

Exon sequences

Seq C1 exon

GCCGAGGAGGACAGGAAGAACCTGGCTCGCATGCAGGACCTGGTGGACAAGCTGCAGAGCAAGGTCAAGAGCTACAAGCGCCAGTTTGAGGAGGCG

Seq A exon

GAGCAGCAGGCCAACACCAACCTGGCCAAGTATCGCAAGGCCCAGCACGAGCTGGATGATGCGGAGGAGCGGGCAGACATGGCGGAAACCCAGGCCAACAAGCTGCGGGCACGGACCCGGGACGCCCTGGGCCCCAAG

Seq C2 exon

CTATCCCTTTCTCCTCAGCACAAGGAGTGACGGCCTGACCCCCTGGGCTCTAAAGAGGAATGTCTGCTGTTGCACATCTGGCTGAGGCCACCTGCCCCGATCCTGCCATCTCTGCATCGCCCCCTGCTGCCTTCAGCCTTCCCTGGGCCCTGAATAAACACCACAGCCAGTTTCCTTCTCATTCTTTTCTTTGGGGTTCAGGAGGAAAAACACAGTCCTAGGGACAAAAGCCAGGTCCACAGCAGTCATTTTTAAAATAAAGTTATTTAATAGTCTCCA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000078814-'43-44,'43-43,45-44=AN

Average complexity

A_C3

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.697 A=0.927 C2=0.805

Domain overlap (PFAM):

C1:

PF0157614=Myosin_tail_1=FE(28.7=100),PF096025=PhaP_Bmeg=FE(25.4=100),PF131661=AAA_13=FE(25.6=100),PF0003816=Filament=FE(28.4=100),PF060097=Laminin_II=FE(45.6=100),PF150701=GOLGA2L5=FE(27.9=100),PF117273=ISG65-75=FE(27.4=100),PF044267=Bul1_C=FE(33.7=100),PF150351=Rootletin=FE(39.7=100)

A:

PF0157614=Myosin_tail_1=PD(37.0=87.0),PF096025=PhaP_Bmeg=FE(36.9=100),PF131661=AAA_13=FE(37.2=100),PF0003816=Filament=PD(37.6=89.1),PF060097=Laminin_II=PD(13.2=19.6),PF150701=GOLGA2L5=FE(40.5=100),PF117273=ISG65-75=FE(39.8=100),PF044267=Bul1_C=PD(35.9=71.7),PF150351=Rootletin=PD(53.8=91.3)

C2:

PF096025=PhaP_Bmeg=PD(6.6=80.0),PF131661=AAA_13=PD(5.8=70.0),PF150701=GOLGA2L5=PD(5.4=60.0),PF117273=ISG65-75=PD(0.9=10.0)

Main Inclusion Isoform:

ENSP00000391939