HsaEX6077834 @ hg38
Exon Skipping
Gene
ENSG00000078814 | MYH7B
Description
myosin heavy chain 7B [Source:HGNC Symbol;Acc:HGNC:15906]
Coordinates
chr20:34996346-34997173:+
Coord C1 exon
chr20:34996346-34996522
Coord A exon
chr20:34996613-34996758
Coord C2 exon
chr20:34997083-34997173
Length
146 bp
Sequences
Splice sites
3' ss Seq
CTGCTGTGCCTGCTCTGCAGCTG
3' ss Score
8.9
5' ss Seq
GAAGTAGGT
5' ss Score
6.22
Exon sequences
Seq C1 exon
GTGAAGAACCTGACGGAAGAGATGGCTGCGCTGGACGAGTCAGTGGCCCGGCTGACCAAGGAGAAGAAGGCGTTGCAGGAGGCCCACCAACAGGCCCTGGGTGACCTGCAGGCCGAGGAGGACCGTGTGAGCGCGCTGACCAAGGCCAAGCTCCGGCTGGAGCAACAGGTGGAGGAC
Seq A exon
CTGGAATGCTCCCTGGAGCAGGAGAAGAAGCTGCGCATGGACACGGAGCGGGCCAAGCGCAAGCTGGAGGGTGACCTGAAGCTGACGCAGGAGTCGGTGGCTGATGCTGCTCAAGACAAGCAGCAGCTGGAGGAGAAGCTCAAGAA
Seq C2 exon
GAAGGACTCCGAGCTGAGCCAGCTGAGCCTGCGGGTGGAAGACGAGCAGCTCTTGGGGGCCCAGATGCAGAAGAAGATCAAGGAGCTGCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000078814-'40-37,'40-36,41-37=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.627 A=0.918 C2=0.226
Domain overlap (PFAM):
C1:
PF0157614=Myosin_tail_1=FE(26.1=100)
A:
PF0157614=Myosin_tail_1=PD(11.7=53.1),PF0157614=Myosin_tail_1=PU(1.6=28.6)
C2:
PF0157614=Myosin_tail_1=FE(3.5=100)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AACCTGACGGAAGAGATGGCT
R:
ATCTTCTTCTGCATCTGGGCC
Band lengths:
249-395
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains