HsaINT0123717 @ hg38
Intron Retention
Gene
ENSG00000087157 | PGS1
Description
phosphatidylglycerophosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:30029]
Coordinates
chr17:78403568-78415027:+
Coord C1 exon
chr17:78403568-78404089
Coord A exon
chr17:78404090-78414878
Coord C2 exon
chr17:78414879-78415027
Length
10789 bp
Sequences
Splice sites
5' ss Seq
AAGGTGCGC
5' ss Score
9.05
3' ss Seq
ACGTTTCCTTTTCCCCGCAGGCC
3' ss Score
13.46
Exon sequences
Seq C1 exon
GGGACCGGGCCGAGTACTGCAAGGCAGCCAATAAGAGGGTCATGGATGTGATCAACTCAGCCAGGACCCGCCAGCAGATGCTGCATGCCCAGACCTTCCACAGCAACTCTCTTTTGACCCAGGAAGATGCAGCAGCTGCTGGGGATCGCAGACCAGCCCCTGACACCTGGATTTATCCGCTGATTCAGATGAAGCCCTTCGAGATTCAAATCGATGAGATTGTCACTGAGACCCTGTTGACTGAGGCGGAGCGCGGGGCAAAGGTCTACCTCACCACTGGCTATTTCAACCTGACCCAGGCCTACATGGACCTGGTCTTGGGCACTCGGGCTGAGTACCAGATCCTGCTGGCCTCACCAGAGGTGAATGGCTTCTTTGGGGCCAAGGGGGTGGCCGGCGCCATCCCAGCGGCCTATGTGCACATCGAGCGACAGTTCTTCAGTGAGGTGTGCAGCCTGGGACAGCAGGAGCGGGTCCAGCTTCAGGAGTACTGGCGGAGGGGCTGGACGTTCCACGCCAAAG
Seq A exon
GTGCGCAGCGGCTGGCTGGAGGACGTTCCAGTGTGGGACAGCCACAAACATGGGCAGGGGGTGGGGAGCCCTGGCGCCTACCTGTTAGAGTGCTGTACTTCTCCCTTCCTACCTTCCCAGCAGCCCTTGCAGGCACATCATAGCTGTCCCATGACTTGGGGAGAGGCGAGCATTCATCTCCTCAAGGGAATTTTTTTTTTTTTTTTTTTTTTGTGACAGTCTTGCTCTGTTTCCCAGGCTGGACTGCAGTAGCATGATCTCAGTTCACCGCAACCTCCACTTCCCGGTTCAAGCAGTCCTCCCACCGTAGCCTCCTGAGTAGCTGGGACTACAGGCGCGTGCCACCATGTCTGGCTAATTTTTGTATTTTTGTAGAGATGGGATTTTACCATGTTGCCCAGGCTGGTTTTGAACTCCGGAGCTCAAGTGGTCTGCCTGCCTTGCCTCCCAAGAAGTGAATTTCAGTTGTGTAAAATCCGTCTCTTTTATGCATCAAAGACTGTATATGGTCACATTATTTGGTGGCTGTGGTAAAGATGTGGTGACATAACCTCTCCTAAGAGATGGAGAGGAACATGCCTTAGCTGTGAGATGGAATGTCACTCTTGTCGCTCAGGCTGGAGTGCAATGGTGCGATCTTGGCTCACCGCAACCTCCTCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTTCCGAGTAGATGGGATTACAGGCCTGTACCACCACGCCTGACTAATTTTTTATTTTTAGTAGAGATTGGGTTTCTCCATGTTGGTCAGGCTGGCCTTGAACTCCTGACTTGAGGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCACGCCCGGCCCTTAGCCTTGTGTTGATTGTCAGAGTTCCTGCTTGTTGGCAACTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACTGCTACCTCTGCCTCCCGGGTTCAAATGATTCTTGTGCCTCAGCCTCCCTAGTAGCTGAGATTACAGGCATGCACCATTACGCCTGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTCCACCATGTTGGCCAGGCTGGTCTCGAATGCCTGACCTTGTGAGCCACTTGTCTCAGCCTTCCACAGTGCTGGGATTACAGGCGTGAGCCACTGCGCCCGGCTGGCAATGCCTTTCTCAGGGAGAAAGAAGATTCATTAGGGATCATTTGTTTTGGCATCAGCAGCCCAGTTTTCTTGTCTTTTCCTCACTATTGCTATTGTTTTTTTCCCTATATGCCAATGTCTGCCTTTTTTCCCCATAGCTGAGGAAATGGAGGCTCTGTGCACAGTCTTGCTGGTGGGGGTGGTAGGAAGAGGGTCACACTCTGCAATGCATGTTTATCCCTCTCAGGCATCTGGCGGAGCAGCCGAAATGGGGCAGAATCCCAGGGGCAGCTCTCTAAGACATGGGTATAACATGCTGGAAACCCTGTGCTTAGCAGTGGGCTTACTGCATGGCCTCTTAATGCTGGGAGGGTGCCCGCCTCTAGCAGCGGGACCATGACTCCTTTCTGACGCTGGGGACCCCCAATCCTGGAGCTAGTCTGTCTAGAGAAGGGGAAATGGTGCCTGGAGGCCCCTGTGCCATGAGTACATCCCACGGCTTTTCTGGCTTCTCCCTGGGCAGTCCAGAGGCCTGTTTTGCTCCTTCTCTTGTCCTGGTTCTAGTGGCTTTCGGAAGAGCTGAGTGAGTGGGGGGCCTCCATGGATGGGGAATCTAGGCTGTGGACTGCAGTAGGCACACAGCTGTGTTGTTGAGACTCGAGGCATCTTCCGGTGCTCAGGTGGTTTGTTTTTGTTTTTGTTTTCTTTAAACCAATGTTTTTCAATTGGGGGATGCGTTGTAAGAAATACTGAAGCCGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTAGGAGGCTGAGGCAGGCAGATCATGAGGTCAGGAGATCCAGACCATTCTGGCTAACACGGTGAAACCCTGTTTCTACTAAAAAAATACAAAAAATTAGCGGGGCGTGGTGGCGGGCGCCTGTAGTCCCAGCCACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGTGGAGCTTGCAGTGAGCTGAGATCGTGCCACTGCATTCCAGCCTGGGCAACAGAGCGAGACTCTGTCTCAAAAAAAGAAAAAAAAAACTGAAGCCCAGGTTCCCCTAGACTTTCATCCACCTCTGTGGGGATTGAACCCACCATGGTGTTTAAAAAACGCCCCTAGGAGATTCTGATGCCTAGCCTAGCCTTAAGAACCACTGTCCCAGCTTGGAATGGGAAGCTTCTGGCATGTCCAGGGCATCCCACGTGCTGCTTTGAGGCCCACAGGCCTGTCTAGGCAGGTGGCATTGTTTGGTGTGGGAAGTGACTGCCACACTGTCCTGCAGGACCCATCCTGGCATGTGTTGTGGCTGAACCAGGCTGGTGGTCAGTGTCTCAGGGCAGGTGGCCCCAGCCCGTGGCGGGTGTGGAAAGTATTTTTGGATTGGCGTTACTTCTGGGAATAACAGCAGTACCCAGGGATGGGGTATTGAAAGAGTTGGCCAGTGGGGCAGCTTTGACCTTTGGGGAGGCCTCAGACCCACACTGTCGTGTGCTGGAGAGGTGCAGAGGAGTGGCTAGGCGTCGCTCTCCTCAACTGCACTGTGCTGGAACGATGAGGAGGCCCCTTAACTCAGCCTGGAGGGTGGGAGGCTCCTGGCCTGTGGCTTCTGACTCTGCCACGGGTTATTTCCCTGAAGTGGCTTTGATAAACGTGAGCTGACTCCCCAGTTACCGCTGAAACAGAAACACCCAACCTGCTTTTCTGGGGCGTCTTGCCTTTTCCCGGACTGATGTGCTTCTGCCACTCCCTCTCTCCTGCCCTGGTGTGGGTGGTGTTGGGTCGGGGCGGGGGGTGCCCTGCAACCCAGGAGTGCTGGATGAGTGGGAAATTGGGGATGATCTTACAGCTGGATCCCAGGGCACGTGCCCATGTGGGGGATGGGATTGGGGGAGAGTTGGCAGAGGTGGGTGAGGGATGGATGGTGTGTGGAGGGGGCTGCTGCTGAGCAGAGGGGCTTCACCCTAAAGCCAGGAACCAGAGGTCAGAGGTCACTTGATGCTGAAGTGAGAGGCGAGGGTCCTTCCCTGCTCAGTGGTTGTGTCCCCAGTGGGATCTTAAGTCAGCACCTCTTCAGGCCCATCTTTTGATGGTCACTTCCTCCAGGGCAGCGTGTGTCAGGTGAGAGATGAGTGGGCAGCCGCAGGGTGCTTGTGGATTTCGATGGCTGGCCCAGTGGACCATTCATTTCCTGACTGTCTGCCCTTTGCAAGGCACTTGCTGGGTACAGGCTCTGTGCCTCCTTGGGTGTGTCTGTGTTTGGGCCCCAGAAAATTCCTGCCGGTGGCTATGCACTGATACCTCCACTCCCTTACTCAGGTCCTGTAGGACAGGCCTGGGCTGATCTCAGCTCCTCCTGCTCCCAGAAGCCCTTGGGCAGAGACAGGTAGCCAGGACTCTGTGGATTCTAGATCCTTGCCCCTCAGACAGCACTCTGCTGTCAGCACAGCACTCTCTGGGAGCCAGGCAACAAGAGGCTTCACGGAGTGACTGTGTTGAACTTGCTGGTGGCCCCATGAGTGTGGTGATGCAAGGAAGAGCAGCGTGGGGGGAAGAGGCACCTTCTCATGTAAAATGACCCCGTGGCTCAGCAGCTGCCAGTGGATTTCAGTGCAGTCTGGTGACAGAAAATTCAGAGGGCTGGCCTTTATTCTTAAGGGTTTTCTGTGTTGTCAAGTATTGCCAGGACTGTCTGGCAGTTGCTTAGATGCCTTGTTGGAAAGATTCTTGTGTGATAACCATTTGCCGATCGTTCAACAGCCTGATACACCTCTTTTGCATACTATGCTGATTTCTTAACATATTTTATCTATCAATCAGTCAATCAGTCTATCATGTATCTCTATCACATTTCAATAAATTGAGCTGTTTCAAAGAACCAGAGGAACACTCAACTATTTAAAGGCATGCACTAGAGACTTCTTTTGCAATATGGTTTATCTATTTCATTCTTATTTGGATTTTTGTAAAGGGTGCCTATTCAGAATACTCAGGAGAAGCCATGCAAGTGTGATTTGGCATAGGGATTACTAGACTTGAAGTCTAGAAGCCTGGTTCTGAGTCCACATTTACCTGTGGCCACAGCTGAGGGGCCTGGCTTAACCTCTTTCCTGTGCAGTCGGGGGGATGGCTCTAGATTGTCAGGAGGACACGGGGAACAGGGCTGATATTTGACTTTCTATAAAATAACCGTATGGTTCCTAGGCCAGGTGAGGCACCTTGGTGGGGCGCGTGGAGGTTGAAATCACACTGGGGGCCGAGGGCTGCTGCGCGTCCCTGAGCGAATAGATTGGCAGAAGGGAGTGGGGTGGGGGCCTTGGATCCCTTGGTGCCGTGTCTCTGGCCTTGCTCCCTGTAGTTCTGTTGCGCTGATTCGGTCGTGAAGGAAGGTGCTGCCAGGCCGCTTCACCTGCATCGCCTTGGCTTTGGGAGGTGGGGCTGAGTGGGCATCTGGGTTGGATCTCAGGCAGGTGGCAGTTCCTCTGATTCATGGTTGTCAGTTTCCTGTTGCCTGGCCCTCGCTCCTCGCCCAGTAGGTGTGGTGGGACAAGGTTCTGGGAGCTGGGGTAGAATTTGGACTCTTAACGGGAAGTGCCTCGTGCTGCCGCAGACACATCTGGATGGGTGCTGAGCTTTCCTTCCCAAGCCTGGTCCTGATCGGGGGTGGGGTACAGGCAGGAGCAGCCCGGCCTTGTCAGCCGTTGAAAGTGTGGTATCTGCTGGGTTGCCAGTAAGCTCGCTTCGAGGTCTTGAGAGGCAGTGCAGGGGAGGCTGAGTATGAACCGTGTCAAGCCAGTTCTTATGTCTCTCTTCATCTTTCTGCTCCATGGAGGTGAGGGACAGAGTGAGTGGTGCCCATCCCATTATCACATTCAGGCAGGAACCATGCTGTGCTGAGCCAGGCTGTGTCCATCTGCTGGGACATGGGCTCTGCCCTCCGGCGTGCATTTCATGAGGAAGATCAGAAAGTGAGTTTTAGCATGTTGACTTCCATTTCTTCTGGACGCAGTATTCTAGCACTAACAACACAATGTGGGTGGCTAGGGCGGAGCAGGTGTTGGATTAAGAGATTTCTGGCTCATGCTGACAGGGAAATCTGTTAATGGTTGTGAGAATGTCACTATTTTTATTGCCTTCCTGATAGGCCAATTGGCGTTCTGCCCAAAGGTGAACTGATGGTGAGAGGCGGGCAGCCCCACCCTGTTTGCCTAGGCCACACGTGAGGCGGCTCTCCCCTGGGCACCCAGTGGGTGTGGTAGGGGTGCTGTGCCCGTGCAAATTGCTTGCTTCAGGCTGAGCACACACACCAGCCTGTGGGCCCTTACAGTTTCTCAGAGCTGTACTAATGTCAGAGCAGGTGAGTGCTTATCCTGTAAGGATAAGCCTGTGATGTCTTCTGTCCCCTCCGTGTTTTTACTGGAGTCTGAGAACCCTGTAAGATTTATTGCAGAATACTGTGGGAGTGCTTGAGGGAGGAGTATGTGTTCATGCATGTACTCTTAAAATGTTCATACACTTCTGCCTTAGAACTGCAAAGGCCTGGCGTGGTGGCTCACACCTATAATCCCAGCACTTTGGGAGGCCAAGGTAGGCGGATCACCTGAGGCCAGAAGTTTGAGACCAATCTGGCCAACATAGTGAAACTGTGTCTCTACTAAAAATACAAAAATTAGCCGGGTGTGGTGGTGCATGTCTGTAATCCCGGCTACTCGGGAGGTTGAGGCATGAGAATCACTTGAACCTGGGAGACGGAGGTTGCAGTGAGCTGAGCTCGTGCCACTGTACCCCAGTGTGGGTGAGACTCCGTCTCAAAAACAAAACAAAACAAAACAAAACAGAAAAACAAAATAGGCCAGGTGCAGTTGTGACTTACGCCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGTGGATCACCTGAGGTCAGGAGTTTGAGACCCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTTACAGCCGCCTGTAATCTCAGCTACTCAGGAGGCTGAGGTGGGAGAATCGCTTGAACCCAGGAGCCGGAGGTTGCAGTGAGCCAAGATCGCGCCATTGCATTCCAGCCTGGGTGACAAGACGAAACTCTGTCTCAAAATAAAATAAAACAAAACCAAAACTTCAGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGACGGAGTCTTGCTCTGTCACCCAGGCTGGAATGCAGTGGCGTGGTCTTGGCTCACTGCAACCTCCGCCTCCTGGGTTTAAGCCATTCTTCTGCTTCAGCCTCCCCAGTAGCTGGGATTACAGGCACGCACCAGAATGCCCAGCTAGTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGATGGCCAGGCTGGTTTTGAACTCCTGACCTTGTGATCTGCCCGCCTTGGCCCCCCAAAGTCCTGGGATTACGGGGTTGAGCCACTGCGCCTGGCCGTCAGAGCTTTTTTTACACTTAATTTGACCTTTTTTGGGAGAGACATTATTACTCTCAGTTTGTTTATTTCATTCAAACAGATATCTAACAAATACCAGCTGTGTCCCAGGCATCATTCGGGACATTGGGAATGGGTCACTGGGTACCAGACAGACTAACTCCCTGCCCTCCTAAGGCTTATACTTTGATGGAAAGCAGATAATAAGCAGATGCGTCTCTACAAATATCGGAACGAGCTACGAAGAGCAGAGCAAGAGAAGGCTCCAGGCTGCTGCAGGATCTGTTACAAGGGGGCTCAGGGAGGGCCTCGCTGAGGAGTAGACACTCGGGCAGTTGGCCTGAGTGAAGAGGGAGCATCCATGCCACCGTCTGGGGCCGGAGTTTCCTGGCAGAGGGGAGAGAAATGAGGAGCCTCCTCGACCACATGGGGCTTGCAGAACAGCAGGGGCACTGGGAGTGGTGGGCACTGAGATTGGAGGGTGGGCAGGGCCTATTGGAAAGGGCCCAGAAGCCATGGCACGCTGCCATGGAGGCCAGGAGTGCCGAGGCCTGGATCAGCCTTCCGCAGGGCAGTATGACTGTGCAGAAGAGCAGGGGCAGGCGTCCTTTCTGAAGAGGAGGCCCAGAGCTGGGAGGCAGCAGCAGTCCCAACTCCAGGTCCTCCTCTGGTGTCCCCGCGACACTTGATTTATAGTGAGTGAGTGTGGAGTAGCAGCCGCCTCTGCTTCCCCTGCACCCTGCCCTCTCTGGCACCCAGGGCTGCAGTATTTATCTCTGCCCCATGAACTGCCAGCAGTCAGTCCCTTCCCAAAAGCACTTGGTCCGCAGAGGGCTGCTTCCTCCCTCCCCAGGCTATCGTTCCTGCTGCACGTCTCCCTCATCTGATGGTTCCTGGAATAGTAAAGATGTCAGGCCCAAAGGTCAGGCCCTGGGATGAAGAGTCGGGCGTGATAACCAGTTTACAGCCTTGGACTGGGAAACAGATTTCCCGACAGCGAGTCCCAGGCCTGATAGTCTTAGCCCTGTGTATACACAGCCTGACATCCTGACTGGTGGTGCGGGTCTGACCGGAGCTCCAGACCGCTCAGGCCTAGAGCGAGGGAGATGAAACAGAACTAAAGGGCTCCTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGATAGGGTTTCTCTCTGTTGCCCAGGCTGGAGTGCAGTGGGGGTAATCTTAGCTCACTGCAGGCTTGACCTCTGTAAGGGCTTTTAGATTCCCCTTCTCCCGTTGGAAACTTCCCAGTTGTCCTCAGGGCACAGACCAATGGCTAAAACTGACTTGTGAGCTGAAATCTTGAAAAACCATTGTTCCCAGCTGCCCTGGCCTGTGGGGCATGCTGGGGTGTGGGCATCTCACAGCAGCACCCCGTGGCATCTCTGGACCTGGCAGGTGCTTGACTCATGCTGTCTACTTAGGGCTCCCCAGAGGGCATCAGACTGGCCTGTGGTCGTTATTTTCTTTCTGATGGAGAAAGATTGCAGTGCAAATAATTCTGGCGGGGAAGTTGTTGGGCAGTCTCAGGTATGTTGAAAACGTGAGCTACCTCTCAAATCCTGAGCACTCACCTGCTGAAAAACCCTTATTCTTTCTATATGGGAAACATAGATAGACATAGAGACTGTCTACAGATACGTATACAGTCTATCTTGGGGTCAGGAATGAGCAATAGATGGAGAAGCGGTTGTGCGTATGATGAAGTTGTGCACTGGAGGTGGCCTGTCTGCCTCAGCGCTGGCCTCTAGGTGGCCTCATAAAGAACCGAGCCAGTGCTTAGGTGGATTTGGCAAATAAAAAGCATGTGTAGAACCACGCACCTCCAGCCTTCCCCACCAGATTCTGTGGTCTAGGAGCTGTGGGGTGGACACCGAGTCATGGTGGCGTGACACAGAGCAGCCTGACCCTCGTCACCCATGTGGGCGTGTGGCCTTCCTACTCATCACTGTCAGTCTTCCCTCAGTGGGCTCAGGAGATCCAGCTGGACAAGCCACACTGAACAGACCCACTGTTTTAAGAGGCTGATCTTGTCATCAGAAAAGTTGGAATGAGCAATGGCAGGTGGGAGGAAGCTCCTGTCTCAGGTCTGAGGCTGGCGGACGCCTGCCTTGCACCTTGTCTTGCCAGCTCCATGCTCTGGGGAAGAGGGGGTGGGAGGGGGGCTCTGTGTACGAGGGGCCATGAGTGCTGTTCGGCTTGGACCAACCTGGGCAGCGTGAGCCATCTGGATCAGAGCCACCAGGGGAAGGGGGCAGCCTGCCCACACCTGTGGTCCTGTGAACGGCCTGCACGGCCAGTGGCCCAGCGGAGCGGTACTGTTTATGGCACAATGCACACAGGCCAGCAAGTGGCTTTGATGTGGCCCTTGGAGGGGTGGAGACGAGCCCATTACAGGAACAGGCGTAGGGCCTCGTCACCTCTTACCCAAGATGTTCTTGGAAATGCTCTTGCTCTGAGTGAAGATTAGGAAACCGTCTTCTATTTTAGGAGCCTGGTGTATGTTACATACTGTGTTGACTCGCCCATGACAGTTGTGTGGGTCCTTTGAAAGGGGTGTGTCAGTGGGGGAGAACTTGACACCCCATGGGGAGGGGCAACTCGGGGATGCTGGGATGAGTGCAGGGCACCCCAGAGGAGCCCGTGGCCACCTGCTTGCCCTCACTCACAGCTGCTCACACCACTTAAACTTGATCACACCTGCTTGCTCTTGCCCACAGCCACTCGCTCTTGCTCACACCTGCTCCCCCTCCCTCACACCTGCTCACTCTCATTACCTTCTCACCCCCACTCACACCTGCTCACACTGACATCAGGCAGGAAGCATTCTTGGTGCTGGTGAAGGGCAGCACGGAGAGAAGTCTTGAGCTCAGGCCGAGCCTGGGTGCCCTGTGGGAGGAAGGGCGTCTCAGGCAGCACGTGTCCTTGGGATGCTAGGTCTTGGTAACAGTCTTTTTAGAAGTAGTTCTGATGGGTGCTGGGCTGCGGGAGTCGGCCCTGGACCTCGGGAAGTTGTGGAACGGGGCGCAAAACTGTGCTTGTCATCTCAGGTAACACGTCAGTATTCTGAGGACGCCTGTGGCCTTGTTACAGAAATGGCCTCGTAGTGTGGCCCCCCCTGCCACACAGTGGCACCCCGTGCCCTGCTTTTTCTCCAACTGTGATACTGACTGGCTCATTTCCCAGCAAAAAGGGGGATATTGTTCTCTGGGTGTGACAGAAACTTACAGGGCCCTTTAGCTTTCTCCTCCATTGTCTTTTCCAGCCAGGAAGTCCCTGGGCCCTGTGGGCAGTGATGGCAGAGGTCCCAGGCCTGGACCCCCTTTGTCCTCACAGGGTTTTGGTGCATCAGCAACTTGAAATAGGGAGGCTGGGTCAGGGAGACTCACTACATGTTCCTCAGTCAGAAGGGCACAGACGGCCTACCCAGGACCTGTAAGGCAGCCAGCCTTCAAGGCAGACCTGTTCTTACCAGCCACTTTTGCCACCCCGCGTGACAACCCCACATCTGCTGGCTTGGGTCGCGTGGTTGTCCTTCACCATCTGCCGTGTTGCGCGCTGAGGTGGCTGCTTCTGAGAAGCACGCGTGAGCTGATTCTCAGTGCTCACAGGAAGGGATGGCCAGTGCAGGCTCTGAGCTTAGCAGGCAGGGTCAGCAGGTCTGGATGTGCAGAGGCAGTTCAGAGTGGGGTTCGAGGCCCTGAGCTCTCTGGGGAGAGGCTCAGTGGGCAGCTGGGCAGGGGTGTATGAGAGCAGGTCGGCAGGTGGCGTCACCATGTTCCCTCTGGGAAAGCCTGCTTCTCGTCCTGCTTGGGACACAAGGCCACAGTGTGAATGGTGAAAGCAAAGACCAGCAGTTGAGCTGAGGCTGCGCCCTGATCCTGGGTCCCTGCTTCCTGCCGCGCCGGGGTGGGGGTGGAAGAGTGAGTCCTGGTGTGGCCTGTCCGCCGCTCTGCAGCAGCCCCTCGTGTCCAGGCACCCAGGGCAGGCCGCCTTTCTCTTAGATTGCAGCAGCGTGTGGAGAGGACTTTGGTAGATGCTGTGCTCATTTCCTGTCTGCACGTTTCCTTTTCCCCGCAG
Seq C2 exon
GCCTCTGGCTGTACCTGGCAGGGAGCAGCCTGCCCTGTCTCACGCTGATTGGCTCTCCTAATTTTGGGTACAGGTCAGTTCACCGGGACCTGGAGGCCCAGATTGCGATCGTGACGGAGAACCAGGCCCTGCAGCAGCAGCTTCACCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000087157:ENST00000262764:7
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.024 A=NA C2=0.033
Domain overlap (PFAM):
C1:
PF130911=PLDc_2=PU(67.1=65.1)
A:
NA
C2:
PF130911=PLDc_2=FE(28.8=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development