Special

ENSG00000087157 @ hg38

Biotype
protein_coding
Gene Symbol
PGS1
Description
phosphatidylglycerophosphate synthase 1 [Source:HGNC Symbol;Acc:HGNC:30029]
Coordinates
chr17:78378640-78425114:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
35.65
97.65
0
Alternative 3'ss
73
chr17:78414879-78414951
+
64.35
97.65
0
Alternative 5'ss
0
NA
+
75.17
75.53
0
Alternative 5'ss
50
chr17:78419676-78419725
+
24.83
75.53
0
Exon Skipping
234
chr17:78417102-78417335
+
2.01
60.97
0
Exon Skipping
110
chr17:78420214-78420323
+
6.06
39.58
0
Exon Skipping
122
chr17:78382664-78382785
+
4.31
39.62
0
Exon Skipping
190
chr17:78392476-78392665
+
98.19
25.03
0
Exon Skipping
78
chr17:78396308-78396385
+
84.27
43.18
0
Exon Skipping
179
chr17:78400677-78400855
+
96.11
30.1
0
Exon Skipping
149
chr17:78414879-78415027
+
93.55
42.58
0
Exon Skipping
5
chr17:78420382-78420386
+
0.88
29.26
0
Exon Skipping
126
chr17:78380562-78380687
+
1.58
50.78
0
Intron Retention
10789
chr17:78404090-78414878
+
8.12
47.47
0
Intron Retention
4385
chr17:78419676-78424060
+
46.6
87.17
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000017715 Pgs1 1-to-1
Mouse mm9 ENSMUSG00000017715 Pgs1 1-to-1
Rat rn6 ENSRNOG00000002949 Pgs1 1-to-1
Cow bosTau6 ENSBTAG00000000675 PGS1 1-to-1
Chicken galGal4 ENSGALG00000007181 PGS1 1-to-1
Chicken galGal3 ENSGALG00000007181 PGPS1_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000075857 PGS1 1-to-1
Fruitfly dm6 FBgn0038649 CG7718 1-to-1