HsaINT0147370 @ hg38
Intron Retention
Gene
ENSG00000187764 | SEMA4D
Description
semaphorin 4D [Source:HGNC Symbol;Acc:HGNC:10732]
Coordinates
chr9:89363741-89377051:-
Coord C1 exon
chr9:89376833-89377051
Coord A exon
chr9:89363951-89376832
Coord C2 exon
chr9:89363741-89363950
Length
12882 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGT
5' ss Score
10.67
3' ss Seq
GAAACGGTCTGTGTCCCCAGGTC
3' ss Score
8.92
Exon sequences
Seq C1 exon
CCTCGTCTCCTAAGCCCCTCCCTCCTCCTGGCTCCTCTTCCCTGTCCTGTCTGGGCCATGTGGGGGACAGGAGGCTTTCCTCTCCCTGGACCCCCTGGCCAGCCTCGGGTGCGGGGCCCGACAGCAGCTCGAGGGTCTCCTTGCTGCCGCCCTTCCTGAGTGACCAGGCACAGCACGTGCACGCCCTGGGGAACTTCTACCTCTTCTGCCAGGCCACAG
Seq A exon
GTGAGTTGGGCCCTCTCTGTCCCCTGTGCCCTGTCCATCTGTCTCCTCCCACAGGTGGGGGGCGGGCGGGGGCATCCTCCACATCCCTCCACATGTTCCTTTACCTTCCTTATCTGTCCTGGCTGCGTCCCTCGGGTTGAGCCGTTTCACGCTTTCATTGTGGGTCCATCCCGAGGGAAACTGTAGACAGTGTGAAGCCACTTCTAGTGTACAGGGGTCAACCAGTGTTTTCTGTAAAGGGCTAGATATTTAGGCCTTGTGGGCTGCAGGCTGTGTCACAGCCACTAAGCTCTGCTGTTGTATTGTAAAACCAGCCATAGTCAATACACAACGAGTGGTCAGGGCTGTGTGCCAGTAAAACTTTATTTATAAAAATGCACGGTGGGCCAGATTTGCCCCAAAGGCCCCAGTTTCCCAACCTGTGGTATATAGGATTGCTTCTCCCTTAAAAAAAAAAAAAATTTCAAGAGACAGGGTCTCCCTCTGTCACCAAGGCTGGAGTGCAGTGACACAATCATAGCTCACTGCAGCCCCTGCCTCCTGGGCTTAAGCCATCCTCCTGCCTCAGCCTCCAGAGCCAGAGTGCTTCTATTTCTGCTAACAATTTGGAGGTTGATATACGTGGTATTTGGAAATTTTAAAAAATTAAGAGCTTCCAGAATGGGAGTTGTTTTAATGACTTGCTTCGTGGTATTTAAAAGCGGAAAAGATTGGCGGGCATAATCCCCCTGCTTTGGGAGGCCAAGGCAGGAGGATTGCTTGAAGCCAGGAGTTTCACAGCAGCTTGAGCAACATAGCGAGACCTGATCTCTACCCAAAAATGTGAAAAAAACTAACCAGGCTTGGTGGCACGTGCCTTGAGGATTGTTTGAGCCCAGGAGTTTGAGGTTACAGTAAGGTATGATGGTGCCACTGCACTCCAGCCTAGATCACAGAACAAGACCCTGTCTCAAAAATCATCATCATTATAAAAACAGAAAAGATTGAGAGTCTAGTGTACTCCTCTGGGACCTGGAGGCATTTGCCCTGGATTGGAAAATACTCGGATGGGATATCTGCTCTTGAAAGATAGTAGATGTCCAGAACCACACTTCAAAGATGTATCCTGTGCTTCAGGCAGTGCGTGGTAGCCCTGGTGGCCCCTGTGTTGTCATCTGACTGATCAGTAGATACAGAAAGAAAGGAAGTGGCCTGTTAGAGCCTGCCCCGGGGGAGGGATGAAGTTAATGAAGAGGAAAAGCAAACCCAATTGCTCTCTTTTTAAACATGTTAAACACACTGTCAGTAGCTCCTGAGAGTTTTAAGGTGCTGCCCTCTCCTGTTAAACAAGCTCTGAGAGCCCCAGGTGGCCCATGTCTGCTGAGGCCAGAATGTCCCTTGGCAGCCAGCACTGGACAGGAGAAGCTGCCGGTGAGCATGGAGCACTGTGGAGACGGAGCTTTGCTAGGCTGGCTTGTGTGGTTCCTGCCCTCCACTGGGTGCTACGGACCAAGGCTGTGCTGAGCCCCCTGTGGCCGCTCTCACAGCTGAATGGTGCTCCTCGGCCAGCTAGTTTGCCTTGGTGCAGGCATCCCAGAGGACTTCATGTCTCCATGGAGACTGTGTCCTGTCGCAGCACTGGGGTCCTTCAGGCAGACTCAGGAAGCTCCTCCTCGGTGGGGAGGCTGGGAAGCGGGCGGGTCTCTATGAACTGGCCGTGGACCCAGGGCTCCTTTGCGGGCAGATGCAGGCAGGCTGTATGGTCAGGCAATGTTGGTTGGTTATTTATTTATTTATTTTTGAGGCAGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCACGATCTTGGCTCACTGCAAGCTTCGCCTCCCAGGATCAAGCGATCCTCCTGCATCAGCCCCCCTAGTAGCTGGGATTACAGGCACACCTCACCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGACAGGGTTTCGCCATCTTGGCCAGGCTGGTCTCAAACTACTGACCTCAGGGGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCCCGGCTGCTGTTACATTTTTAAATGTGAGGCTCCAGGTGTACCCCCTGTAGCTAGGCAGGCATACACACAAGCCCCTGGGGTCAGCAGGGAATGAAAGATGGGTGCCCAGGGAGAAGGGACATCACTGTTACAGCAACAGAAACCACCCCAGATATTTCAACCACAGGGCATTTAACACAGGGAATTGGTTACAAAGGTGATAGAAGGGCTGGGAACAGTGGGAAGGTGAGGTTTCCATTATCAGCCATGGGCAGGAAGAGTGAAGTGTCAAACACTCAGTCTCACTTGCTGTGCCACCGAGGCTGTGGCCGTGTGATCTGCAGCCTCTCCCTGCCCGCCACACTGCCTTCACTGCTGGAGGTCCTACTTGAAGCCACAAAAATGTTTCTTCCTTCCAACTTCCTGTCTCCTGTCAATGACTCCCATGGCCAGACCTAACAGAAAGCTGGCGGTCACAGATGGATATGGGGAATGTAGCTGTGGGCTTGCAGCAGTGTGGCCAGGAGTAGTGTGTAGAGGGTAGGGGAGCTGAGGGAGGAGGGCAGTCCTTTGCCAGTGCTCAGGATGGACTGAACAGATTGAGAACTGAGGCCCCCAGCCCTCCGCCACCCCCTTTTCACGTGGTCTTTACTTTCTCTCCAGAGGCATTTGGCCCCATCTGGGACATTCTCGTTCACTTGTTCCACTGAGGCCACAGCCTGCGAAGGCTGTGAGACCTCCCCAGGGAGCACCAGCTTAGGAGAGAGTGGCTTCAGCCTTTTCAAGGGTGGGCCGAGGCCAGGGCATCATGGGCATGCCGTGAACTCAGAGGGGCTGTGGCTGTGAATTTCCCGAGTAGGCTCCAGGGTTCTGTTGGGGTCTGTAGATGCTTCCTGCGACAGAGGCCACAGTGTGACTTGCAAGTCCCAGAGACTTTCCTGAGGAGAGTGAGTGCCATTTTCTGCCTTGTGGGCCAGGAATGAGCCATTCCAGGTGAGGCCCAGAGCCTGGAGATTGCAATACAGTGCACTCAAGGCACAGGCCTACCGCTTCTGCCTGTGTCCTCCCCCAGCCACCCAGGGCAGGGCTGCTTTGGAACTTGGCTGGGTTTTTCTTTGCTATAATGGCTGTTTTCGTGGTAGCTGTCACAGTGGTTTGGGGGCTGTCTGATTAAAGGGCTAGCAAAGTGTCTTTAGAATATGAAACTTAAGAGGACATTCGTGGCATCTTCAGTTCCCCATGCTGCGTCCTGGTGCCTGTAGCTCTGCTGGGTGACCCTGTGTCTTGGGGAGCGTCTCACCCCCCAGAGAGGGCTGACTGATGGAAGGTCAGCTGGTCAGGGTTGCACTTGGGGACTGGGTCTGCCCCAGAGCTGGTGGAGGCCCATGTGTCACCCAGGAGATGTCCCCACCTGCCCCAACACTTGGCCAGTGCTCAGAAAGTGGCCCCAGGGACTTGGCCATCCAGGAGAGGTGAGGGCCCTCTGAGGCCAAAGCGCTTCCTGAAAGGGGATCGGGGTGGGTCTGCACAGGGGAAAACATAGCCTGTGGTGTGTGCAGAGGCTGCCAGGGCACAAGGGCCCAACGTGGGGTGCGGTGGAGGTGATGTGGCCACGTGGGCGGAGTAGGGCGGAGAGGCCTGTGTCCTGGGGATGCGAGAGCTTGAGGCCTGGTGGTGGGGTGGAGGCCCACCCTTGTCCTGCACCCAGGGGCCTCAGTGCCCATCCAAGGGAGGGACAGGGCCACACCTGTGGGCCTGTGTCAGGAGCTGGGGTGGGAGATTGGCCACCAGTGCCACTCTCCACCTAGACACATTTCATCCCTTCTCCACCACAGTTCTCGCCTCTAGGAAGTGGAATTATCAGTGGAAGATGATACGGAAAGATCCACTGATGGCCCTGGCACAGGCCAGCCTTGTCCCTGGGGCAGGATGGGACGGTCCTGAGAAGGCCCTGGGACACCCTAGGGGTGTCATAGTGGGAACTATGCCTTTGCAGTGCCCAGGTGAGACAGCACATGGTGTCACCCCAAGCATGGTACCCTGGGCTCAGTGACAAGAGGGGTGGGCAGGTCAGGACTGCACTGCCTTGGGGCCCGTGCCCTGGGAGCCGCTAGCCCTATGATCCTGAGTCCTGGGGGACTGAGTGCATCGGCAGGGCCTGGAGCAGCTGGGAGTGGCCGACTGCCTCAGTGTGCACTGTGGCCGCACAGGAGGGACAGCGGCCTTGAGAGTGTTCAGAGCTGTTGCACAGCCATCCTGCACCGCGTTGGCCCTGGGATGGACTGCTGTCTAAGCTTTGTCATGCGGCTAGCAATGCACATTTACTATAGTCAGTCACCCTGGTACCAGCCGTGAAGGACGGGCAGGGACACACACACCACACCCCAGACACACACACACCCCCGACACACCACACCCCAGACACCACATCCCAGACACACACCACACCACACCCCCCCACACACACCTCAGACACCACACCCCCGACCCACACCACACCCCATACACACCCCCGACACACACCACACCCCACACACCCACCACAGCCCAGACACACCACACCCCAGACACACACCACACCCCCCAGACACACACCACACCCCCCACACACACCACACCCATCACACCCCCCACACACACACCCGACACACACCACGCCCCCCAACACACACACCCCACACACCACACCCATCACACCCCCCACACACACACCCGACACACACCACGCCCCCAACACACCACACCCGACACACACACCCCAACACACACCACACCCCAGACACACACCACACCCCAGACACACACCACACCCCAGACACACACCACACCCCACACACACCACACCCCACACACACCACACCCCACACACACCACACCCCACACACCACACACATACCACACCCCAGACACCACACACATCACACCCCCCCACACACACCTCAGACACCACACCCCCAACACACACCACACCCCAGACACACACACCCCCCACACACACACCCCAAACACACCCCGACACACACCACACCCCCCACACACACACCACACCCGACACACACCACACCCCAGACACACACCACACCCCAGACACATCCCACACACATCACACCCCACACACACACCCCAGACACACACCACACCCCAGACACATCCCACACACATCACACCCCACACACACACCCGACACACACCACACCCCAGACACACACCACACCCCAGACACACACCCCCCCCCACACACCACACCCCAAACACACCCCCACACACACACCACACCCCAGACACACACACACTACACCCCAGACACATCCCACACACATCACACCCCACACACACACCCCAGACACACACCACACCCCACACACACACCCCAGACACACACCACACCCCAGACACACACCACACCCCAGACACACATGCCACACCCCAGACACACACACCCCAACACACACCACACTCCAGACACACACCAACCCCACACACACCACACCCCAGACACACACACCGTCACACACCACACCCCACACACATGCCACAGCCCACCCCACATACGCACCCTACCCCAGACACACACCACACCCCACACACCACACCCCAGATACACACCACACCCCCCCCACACACACCTTATACACCCCAGACATAACACACACCCCACACCCCAGACATACACACCACACCCCCCCACACACACCTTATACACCCCAGACATAACACACACCCCACACCCCAGACATACACATACCCCTGACACACACCACACCCCACCCCAGATACCACACACCCCACACCCCGACATACCCCTGACACAGCTCACCCCAGATACACACCCTACCCCAGATACACACCATACCCCAGACACACAACACCCCCCCAACACACACCATCCCAGTCACATGCCACACATCCCAGACACACACCCCACACGCCACATCCCACACACACACGCCCGACACACCGCACCCCAGACACACACCACACCCACACACATGCCACACCCCACACATACACCCCACCCCACACACACATCACACCCCTCACAACCACACCCCACACACACACCACACCCCACAAACTACATAGACTATGCTAGCCACATACCACACACCAGACACACACACCACACATGAGCATGACGTATACCGCACACATGCCATGCACTGTACCCCCCCACACACATCCCAGACACACATACCACACACACTACACAGACCACACAGCAGACATACCACACACCAGCACCACACCCCCTCACACCACATGCCACACACACCACATGCCAGCATCACACACACACCATACCTCCTTCATACACACCACACACACAAACCAGACACACACCTACATACCACACACCACACACCAGCCACACACCACAAACACACCACACACACCACACGCCACGCATATATCAGATACACCACATACGTACAGATACACCACAATATACACCACACGACACATGTACCACAACACACACACACGACATAACACGCACACACATCACAAACACAATCATGTCCACCACACAACACACACACCATGTGCATGCACACAATAAATGCACAGCACAAAACATCACATACACCAAATCACACACACCACACACACATCAAACACCATACACACAGACCATGCATACTCACTGCACATGTGCACACATACCAACACACACCACACACACACACTGTACACACACCTAAAACCACCCCCATACACACCATACCAAACACAACCACTCACACATGCACCACACACAGCACAGCATACAACACACATCACACACACACCAATCATACCACTGTTACACACACACCACCACACATACTGCACACACCAAAGCACATACACACCACATAGACACATGCACGCTACCCACACCACACCAATCACATCCACACATACACAACCATACACACACACACACACATTGTTGACTTAGGATCGTTTCAACTCACAGTGGGTTTATTGGGATGCAGCCCCGTGGCAAGTGGAGCAGCATGTGTATTGACAAGGGGAGGAAAGCCGTCTGGAGCTGGTGAAGTAAAGTTAGCATGCAGCCGAGCTCTGCTCGTCTGAACTGATGAACCCAAGTTCCTCATGGATCACTCAGAATACAGATGGGTGAAAAAATAACCCCACCACCCGTGTGCCAGCACATAGCGCATCTGGCATACAAACGTAAGGATCAATAGCGATGAATGGCGATGGGTTGTGTCTACATGCAGATACAAATCATGCACTTGTACATTAGTGTGCACACACAGAAACAGATCGATATAATTTTTTAACCAAAGTGCAGTCTTTACCCTGTCAGGGCCCTGCCTTCACCTCTGCCAGGACTATCTTCCATGTCAAGTTTAGACCCGTGTCATTTTCAAAGCTAATAATGGTTCCCCCATACTTTAGGCAGCATTTAGATATTTGGATTTGGGATGGCCTTTTATGTTTTAACTACAGTGTTAGAAATCAGAGCCCTTGGAACCACTGGGATCAGAGGGCAGCAGCAGAAGGCGCCCTTGGTCCTCTTTGAGGGGCCCAGGGCTCTGGAGAGGGCCCCCGTTCCTAGCAGCCACAGTGGCCTGTTGGCACGCATGTGTGTGTTCCAGCTGCTCTGTGACATTTCCCTTTGTTTCAGACTCTTGAAAGGCCACGGCCGTCGTGGGAATTAGTTGACCTTGTGTGTTGGGCCACCCTTGCTGGACAGGACAAGGTGGTGCTATCAACTCCCTGTGCTCTGAGGTCCTTCGCATGTTAGATGAGGCAGCTTCACCAGAAACTATCCATGTCTCTTCTGTTATCTGGGATAATTCCACGTGCCTTTACAACACAGCTGTCTGGTTACCTGGGGTCTGGAAATGCCCTCGGTGCCTCAGTGGTGCCTTCCCACAGGCCCCCCATGGAGCCAGGCGATGCCTACAGATGCCTCAGTGGTACTTTCTCAGGTCCCTTTGCAGAGAAGAGGTTCAGGATTCCTGCCCACATTGATAAGGCGGCTTGGCCAGTAAGTGGCAGGCATGAACAGGTGCATTCCAGAAGCGCTGGGGCTGGTCCAGTGCCCTGAGTGGTCTAGAGCATACCAGAGTGAAACGTTAGGCTGCGTCGGCCTGGTGACTGTCAGGGAGATGAGGACTCAGAGAAGGGAGCTGTCAGAATTGCTACCTATGTGGCAGGGGTCTCACTCTCTCCTCCCTCCTCTTGGGGCCCCTGGCTACTCTGTGACTTCAACAGAGGACAGAAAGGATGACCAACAAGGCCTCAGGGCATACCCCCAGCTGCACTGTCCTTGTCCCCAGAAGGGTCCCCAGAGTCTGGGAGGGAGGAGGGGCCATGGCCAGGATTAGAAAAGACCGTGCCCCAAGGAGAGAGCACAGAGATGGGCCAGGGAAGCAGTGGGATCCTCGGGAAAAGAGGCTGGGAGCAGGTGTCCGGGTGAGGCCCGGGCAGCGGGTACAGGCAGGGACAAGCCAGGAGTCCCATCATGGAAGACATGATGGCCAGCGGCCAGCACTGTGTGCAGAGAATGGCCCCTCTGGGGATGTGCCCGCTGCCCCATTAGTTGCAGGAAGGCCACCTGGATGTGAGTTTGGGAGATGGGCTGGCCCCGAGGCAGCCAGCCCTGAGGTCAGAGTGGGCCACATGCATGGGGATGCCGGGAGGACACAGAGGAGTGCTGCAGGAGATGGCAGTGGGGGCACTTTCCAGGATGGGCCCGAGCAACTCAGTCACTGGGTGGATGTCTCACCACCCCTCCAGGCCTTCCTCAGGGCGAGGCCACTGCCCAGAGGGCACCTGGTTTGTCGCAGAGTAGAATCAGCTCCATATTTTGTAATCACATCCACGAAGCTCTGAAGCCATGGTGGTCCTGGCACCAGCTGGCTCCGTTAGAGGCTTGGGGTGGGAGTGAGCAGGTGGGAGGTGCCCCAGTGACAGGCTGAGTGCTGGAGCCCAGGCTGCCAACAGCCTCCCCAGACTCCTGAGTTGATGTAATAAACCCAGCCCTGGTGAATAAACCTGGCCCTTGCTTATACCAAGGTGATCAGTCTTCTCACGACAGTCCTAGCTGTAGGAGAAAGATCATTACCTACGGCATCTGCCACAGCAGTTAATTTGCCTTCAACTTAAGCTAGTTGCAGTGACAGGAAGGGCCAGGGGGAAATATCTGTCCTCAGGACCTCTACCCTAGATCCTTGTAAGCCACAACAACTTCCCTTCTTTGAGGGCGCGACCAGTGTCACCTGGCTCGCCACTGGGAAGAGCCAAGGCACATCCAGGTTGGTGGCTGCTGAGCCCCACAGCATCAGACCAGCCTCTTGTCCCCACCCCACAGAGGCCAAGGGGGTGATCTGGGAGTAGCACCCCAGCCTGGCCGCTCTCTTGAGGTAACAGGGTTGGATGGTTAGGGAGCTTGGAGCACTGGCCCAAGCAAGAAAACAGTGGTGTTTTCAGGAGGCCCTGCTGGGAGATGGAAGACAGCTCCCCACTGGGGGCCTAGGATTCCAGGAGCTCCCCAGCAGTCCTCCGTGGGACATACGTGGGTTTGCACCTGCTGCCCTGTCCCGCTGAGGGTGCGGTGCTGATGGGGTGGCCCTGCACACTGATGGTAACTCTCACTTTCCCTCTCTCTCATGCATTCAGAAAGAGATGGATAGTTTAAAAACGAATACATGGAACGTAAGTACTTCTTTAACATCTTTAATGTCTTATGATGATCAAGCATGTATTTAAATAGTATTTACTGATGCCTGTTAGCAGTGGTAAGCACGTGTCTGTTTCTGCTCACACCCCAAGAGTGTAGAGCTTTGAGGGTTTTGCAGTCAGTGGTCCCATGATGGGGCGTTGGGTGATTAATCCAATCCAGCTTAGGCCACCCAGATTCTTAGTCTCAAGGGCTTGGTCATGAGAACCTTCCAGAGGCTCCTGTGACTCAGTGACTCCAGTCCCCTGGGTGGTTCTTGGTGCAGGTCACATGAGGGAGGAGACCGGGCTTTTATAGAACTCACTTCACTGTCTGTTCAAAGAAAAGTGTTACTTGATCATAACAGCTCAAAAAAATCTGTTTCTTAAAATGAGATTTTACCTGGATGCCCATCAGCTGGGAAAGGGAATATCTATTCCCCAGTTGATGGGCACCTAGATGTACATAGAGACATATGTTTGTACATCTATGTAATATGTACTTATATTTGTAGATAGATACATGGAATTATCTGTGGCCAGAGTCCAAAACATTTTGAGTGGGAAAAAACAAATTATAGAGTGTTAAGTTTTGTTTTTTTTTAAATTCTGCACAAAAACCAAACCTGTTCACAAGGGCTTGTCCACCAGGCCAGGGCCAGATGGGCCGCCAGGCAAAACAGTTTTGGAGCACCTTCTGAATTTCCTTGAGTTTACAGAATGTTTCCTTCAAAGTAACACTTTTATAAAAAATTATTATTATAAAAGCAATGCTTGTTTGTTATAAGTTTGGAAACTCCAGGGAAGTATAAAGAAAAAATTTAAACAATCCCAAATTTAACCATCCAGAGGTAGTTACCACCAGCATCCCAGCCATTTTTGGGCCATGACTATCTACGTTCACACATGTATACATGGGTGTGTACATATATGCACACATTCCTAGATATTGTTTCACTTATTTTTCTGTGTTGCTGAATATTCTTCGATGGCACTTCGAATGAGTGACTTGTGGCCCCCTTCTTGGACATTTCCCAACTCCTCACTGATAGAAACAGGGCTTCACTGGGCCCATCCTTGCCTCGGGACTCATTCCTAGGACTGCCCAGCTAAAGGGTCTGAGCTTGGTCAAGTCCTTGGGAGGAGCATTCTCTGGTGATCCTGGACAGTGGGGAATTGTTGACCAAGAGACCGGACAAAGATGAGCAGATGCCACAGTCAGTAAAGCAGGGAAAATGCATTACTAAAGTCAGCTTCATTAAACTGGCGATCTCTTCTTTTCAAAAGTCCAGCATGTGCCACAGAAATGGAAAGCTCTCTGGCCACTACTGTCCTGCCCAGGGAGGGGAGCGTGGGTCCACCCACACCATTTAATACCTGTAACTGGATGCACCTCTGCCCCTACACCTGAGAACAAGGCCAGTTTTTGTGTGTGCAGGTACTTTGGACTCTTTTGGCTCTGGAATTTGTTTTACCTGCTCAGTGTTCTGAACTCCTTCCTTTTCACTACTAAGCATTCTCCATGAAGCCACACTTCATTTTGTCATTGTGAGGTTGATGGACATCTAGGGCAAATCTAACTTCTAAAGACCAATTCTTACGAGGTGTCATGGTCAAGCAGAGGCCATGGCCGGCACTGGTCTAGGTGGCCCATGGCCCATTTGGGGGCCTTGGTGGGCCTCGAGGAAGGGCAGGTGCTGGTCAGGGAGCCGGGTCGCTAGGCAGCAGGTGGGTGTCACCCCAGTCCACGCTGCTGGGGTGCCTGGCCTGATGCAGGCTGTGCCTGAGGGAGACAGAAGCAGCAGAGTAGGCTGGCCGGCCTCCCCAGCCCCACCACAAGCAGGAGCTTCAGAGACAGAAGGAGCACCTGCACCCCCTCACCTGCCCTCCAGGGCCTGGCCTGGCCCTCCCAGCTCAACTCCAGGGTCTGTACGCTCTGGGGCTGGAGCTTAGTGGGACTGTGGCCCCCCTCAGCCCTTTCTGCATTTGAGTGGAAGCCAGTGTGCGAAGCAGATCAAAATGGATGTGCTTGTTTTTCCTTCAGTAAGAACAGGGAGTTGAGCCTGTCCCAACATGGCCAGCAGCCCCTGGAGGGCCAACAGACTTCACGAGCAAGGAAGGCCGGGAGGTGACCTGCTGACCAGAACTTACTTGTGCCCCTCCCCCCCGCCCAAAACCCCCAACATTCTGGTTTTCACAGCCCCACCCCAGCCACCTGGAACAAATAGTGTCTAGGAGTAGCCCTCAGGGTTGGCCGCGCAGACTTCTTGCCCTGGGATGAGGCTGGCCTCCCCAGGCGAGGCAGCCTGGGCCACAGGGGAACGTCTCTGCCTCGCCCACCCTCCTGATCTCTCCATCAGACAAGCTGAGGCCAGCCAGGCTCCACCCTGGCAGGTTGCAACAGATGGTCTGAGTGTGTGTGAAGTAACTGGCCTCTCTACTTTCTTCAATAAGTAATTAAGATCAAAAGCCCAGAGAAAAACAACAGAGGTTTGCGGCAGAAGTGGCCAATGTCGGGCCCAGAGTCCATGCTCAAGGCTGGAAGCCCATCCTGGATGTGCTGCACTCGGCAGTCCTAGTGTAATTCTGCAGGGCCTGGCCCCTGCCAGGGTCTGAGCTCTCCAGCCTGTGGCATCTACTCCCCTCCAAGCCCACCCCAGTGTCTCAATTGGAGAGACAGGCCCTCATGGTCCCCACTCTGGCCCAGCCCCCTCTGCACACAGCTGGCCGAGCTCTGGGCCTCTCCATGCTGTGGCCCTGGTGATGGCAGAGCCTTGGGATGTCTCTGTCCATGTGGTCACAGGACATGTGTGTGGCAGCAGGGCCATGGTGGGGTGGGATGCTGTTCCAAGGCCCAGAACCATTCTGTAAGAAACCAGCACAGCGCTGCAAGAAAGGGGGTCCTAGGGGACACAGGCCACACAGGTGTGCTTTGAAAAATGGCAATTAAGGTCAAAGAGCAGGAAGTCCACAGGACGGGCCAAGGCCAAGGCTCCCGCTGGCCATGGGGAAGCCACCTCCAGGGCAGTCCCAGGGACTGAATTGGAAGTTGTCCCAAGTCACTTCAGGTCCAACTGGGACAGCAGAGGTAACCCCCCTGCACCCTCATGGGGCAGCTTCTTTGGGTCCTAAATGTGGACTCAGAGGTGGAAACGGTCTGTGTCCCCAG
Seq C2 exon
GTCCTGCAGACATTCGCTTTGTCTGGGAGAAGAATGGGCGAGCTCTGGAGACCTGTGTCCCTGTGCAGACCCATGCACTGCCCGATGGCAGGGCCCATGCACTCAGCTGGCTGCAGGACGCCATCAGGGAAAGCGCTGAGTATCGCTGCTCTGTCCTCTCCTCAGCAGGGAACAAGACTTCGAAGGTGCAGGTTGCTGTGATGAGACCTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000187764:ENST00000455551:17
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.275 A=NA C2=0.079
Domain overlap (PFAM):
C1:
PF138951=Ig_2=PU(26.4=32.4)
A:
NA
C2:
PF0765410=C1-set=WD(100=78.3)
Main Inclusion Isoform:
NA
Associated events
Other assemblies
Conservation
Mouse
(mm9)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development