HsaINT0148846 @ hg38
Intron Retention
Gene
ENSG00000144040 | SFXN5
Description
sideroflexin 5 [Source:HGNC Symbol;Acc:HGNC:16073]
Coordinates
chr2:73058528-73071836:-
Coord C1 exon
chr2:73071604-73071836
Coord A exon
chr2:73058597-73071603
Coord C2 exon
chr2:73058528-73058596
Length
13007 bp
Sequences
Splice sites
5' ss Seq
CAGGTGAGG
5' ss Score
10.07
3' ss Seq
TCTCTCATCCTCTTCTTCAGACG
3' ss Score
8.34
Exon sequences
Seq C1 exon
AACTACACTCCCCACAACGCCTTGCGCCTCCCGCTCGCTGCGGTTGATTAGGGCCAATCGGGAGAGGCAGCTGTGGCGGGGGCCGAGGAGGGACATTTTAAAAGGGCCGGAGATTGCGGGCGTCAGTGGCCATGGCGGATACAGCGACTACAGCATCGGCGGCGGCGGCTAGTGCCGCTAGCGCCTCGAGCGATGCACCTCCTTTCCAACTGGGCAAACCCCGCTTCCAGCAG
Seq A exon
GTGAGGACCGGGCTGTGGTCTGCGGGCCGGCGGGTGGCAAAGAGAGGACGAGCAAACTCCCCTCCAAAGTCCCCTTCCGCCCAAGGGTCTCCCACCCGCGGCCAGCGGAGCCTGCAGCTAGCGCCAGGGGGGGAACCTCGGTCACAGTCACCCTTTTCCCATTGGTCAACGGGGCGGGCGCGGACTCCCATCTTGGCTTCCTATTGGCCCTTGGCGCCGTCACTCCCCGACTGCCCGCGCCCTCTAGCCTTTCCCGCCCGCGGCGCCCTGTGATTGGCCACCGGCGGCTGCGGTCAAGGTCCCGAGCGCCCGGCTTCGAGCGGCTGCTCAGGGTCGCTCCGGGTTGTGCAGCTGCCCGCCCGGGACGCAAAGTTCTAGTCTGGCCCTGGATGGGAAGTTGGCGTGGCCGGGATGCCTTCTAACTTTTTCCCCCGGTGGGGACTGACGTTCCTTTCGAGCTGCTGGCGGTGCCGCCGGGCAGCGTCGCGCCCCGCGGTCACTCCCCAGCCCTGGCCCCCAAGCCGGGCTCGGCGCGCGCAGCAGGTTGAGGGGGCGAGTGCCGAGGCGAGCGGCGGTCCGGCGTCCCCCGTCCCTGCTCTCCATCTCGGGCTGAGGATTCGCTGACGCAGCAAGCCGGCCGATGCCCTGAGGGGACGCAGCCAGGGCGTGCGGGGGAAACGCTGTGTCATCCCCTGGGGCCGTCGTCCCTCCGAGGGGCTGCCGCCTGGGAACCCCCCCCCAGCCTCTTCCTCGCTGTGTTCTCCGCGGAGGGTCTCCCGCGCCCGGGCCCCCGCGCCGCCGGGGACTGGCTCTGGGCACACCCGCTCAGGCTCTTCGGGGCACGGCGACAGGGGTCCTTTCCCTCCGGGACCTCCTCTGGGGCGTCGCCGACTCGGCCCTAGACTGCGGAGGCGGGGGTGGAACGCGGAGCCCGGGCGCCTGGTTGGGCCCGGAGACCGGAGCCGGGGAGGGGCCGCTCCCGCGCCGCAGACCCTCGGGCTCCCGCGCCTCCCGCACCAATGAGACGGAATTTATTAGGAAACAGGCAGAGAGACCGCTGAAGTGAACCGGGGCTTGCCAGGGGTGGGCGGCAGCCGAGGCGGCCAGAAAAGAACTTTGAAGGAAGAAAGGAAATTGTGCTAAGGTCGGTGCGGTGGCTTTTTTTTTCTTTTTTTGTTGTTGTGGTGGAAGGGGACTGGTTCCAGCAAGGGGGTGCCCCGAGCTTTGCTGATAATTAGGGAACTTGGCTCCTGAGCCGTCTGAAAAAAATGTCCCCAGTGTTTCTTAACAGGACTTTAATTCCTTTTAAAAGTAGGCCATCTCAGCATGTAGGTATCCGAGGCGAGACTGGCATCTTCCTTCCAGTGTAGGAGGCCATCTAGGGCGAGAGTGTCGGGGTGTCCCTGCCTGGACTTGAGTGACCTTATTACATTGCCTGTCCCCGCTCCCACCCCCATTCTGCTCGTTCTTAAAGGCTCAGTCGGGCCTGCCTCTCTGGCAAACACTTGCTCCCTTCTTCTCTGGTCCCATCAGATCGCAGGCTTCCTCCTGCACATCTCTTTGGCCACCTGAGTCAGATCCTCATAGCTCTCCATACAGTCTGCCCTGTGGTCTTCTAAATGTTTGCTGTGTGACGACTTGGTTTCCTCAAACCCCCTGTAGGCCTTTTGCAAGAAGGGGCTGATCTTGCCCTTCTCTGCCTCTGTCTTACCCTGATGGAGACAGGTTAGGCATATAGTAATGTGCCGAGTAAAAGATTTGTGTTTCCTTTTTTTTTTTCTTTTTCTTTTTGTCCTGGTGTCTGTTATCTGTATGTGGCACTAGGGACATTCAGTGACCTAACAGACATTTATCAAATACGTCTTAGTGGCTTATATGACTGAGCCCTGTGCTGTGAGCACTGCTCTAGAGCCATAGATAAACATTTTAGGCTACCCTGTTCCTGCAGCCATAGCGGTACTTCTTTTTGGCACTGCTCTTGAAGGCAGTAAAAGTGTTTGTTGTATGCACTTTTGAAGCTCCCCTCCTCCAGCATAGTGGCCTGCATAAAGCACGTTGCATGTGATTCATCCATGTTAAGGATCTTCTCTTTCCTCCATATCTGCTCCTCCCGCATGGCTCCCTGGCTCTGCAAACAGCCCAACTTGCCACCCAATCAATGCAGCCAGAAACCTGGGAGCCGCCTGTGTTCTTTCCTTCTTCTCCCTCACCCTTTAAATGCAACCAGAGGCCCAGTGATCTTACCTCTTACACAGCTCTCAAGTCCACCCATCTCTACTGCCAGAATCCTAGACCAAGCCCCCATCGTCTATTTCCTGGGTCACTGCAGTAGCCTCACAACAGGTCTCCCTGCTTCCACTCTGGCCCTCTTCCAGTCCTTCCTCTTTCTGCAAGTCAGAGTCCCAACAGTGCAGATCTGATCAAGGGACTCCCTACGCCCTTGTAGATTTAAATACCCTCCAATGGCTTCCCCTGCTTCTGAGATAAAGACCTCACTTCTGAAGGGGCCCCCAAAGTATGCATGGCCCACCCCACTGACTACTTCTTCCTTGAATCCCACCACCCACCCACCCACACTTCGCACCCTCCTTCACATCACACTGGCTGCTTTTCAGCCTCTGAACCCACCACGTTCCCTCCCACCACTGGGCCATCTGCTTGGAACATCACCTCTTCCTCTACCCCCAACTCTTGTTCCCATTCTTCCTCATCCCTGGTGTATCCATGAAGCATCACTTTCTTGGAGAAGCCTCCTGCACTCCCAGGTTGGATTTTTGAGTGTTCGCTTACTGCAAAGTACCTTTCTCGGTGTATACATTGATTTGTGATGAGTATTTCTTTGCCATCTGTGTCTCTCTGTTGACTATGGACTTTGCAGAAGTGGGGGCTGTGCCTGTCTTTACTCCCTGTTGACTCTCCAAGGCTCAGCACAGTGCCTGGCAGTTAAGAGGTGCTTAATGAAGATTTGTTATATACATGAATATCCTGGAGACAATTCAGTAGGGCTTTGCGGACTTGAATTAAATTGACTTGTAAGGTTGTGACTGGGGAGGTGGACCAACTTTTCTCCAAATTGTCCCTTAGGGATCTTACAAAATTGCAAGTGGTGTCATGTTTGACAGTGTAAGGTTCATCAGTGCTGAGACATCCCAGAGTTGGGGTGTCTCTAAGGAGGTGAGTCTAAAGACACAAAGGTTGGCTACATATGTACTGGGTTGATGAGCTCCTTTAGGGCCCAGCCCACATCTCTGTGTCCTGCCCTGGCATGTAATAGTTGTGTAATATATATGCTCATAGTACCTTGTGCTGGCCTGACAGAAGCCTGCTTCAAGGTGGTTGATAATCCAGGGTTCATTCCCAGCACCCATGCCAGGGACATGACCCTTATTCCCCAATTAATCTCACCGCTTTCTGCAGGATTTGTTACCAAGGTCTTTCCTTATTCCCTGGAGTCGCTCTAGAACTCCTCTTTATTCCCTCAAGTGTCTCCCTGTGCAAGAGGACGGGCAGAAAGAGGGTGGAGGGTGTGGAGGGTCAGAGTGTGAAGAAAGGGTGATGAGTGTTGGTGGTCTGTGACCATCTTTCTCCCCATAAGATGGTGACGATAGCCAAGCATCATTCCAGCCTTTTTGTGTATTGACTTACTGAATTTTCACAACAACCCTGTGAAGCAGGTGCAATGATCTCCAATTTATGGGTAAGAAAACTACAGCACACAAACAGATTAAGTAAATTCCCAGGCAGTCTGTCTCCAGAGTTCATGTTTGTTTGTTGGTTTGTTGTCAACTTTTTATTATGGAAGTTTACAAACATACTAATCTGGAGACAGTTGTCAGTAAACCCCTATGCACCCATCATCCAGCTTCAACAGTTGCCAACTTAAAGCCGGCCTTGTTTCATCTATGCACCCACCCCCCACAACCCAATCAATGAATTACTCTGAAGCAAAGGCCAAACATCCCATCATTTCATTGAACCCACTAGTAGGTATCTCTAAAAAATAAGGACTCTTTGGTTAGCTTTTTAAAAATTTTTTTATTTTGGAATAATTTTAGAGAAGTCAAAAGACAACAAACAATTCCTGCCTAGCCCTCACCCATTGTCCTCTGTTATCATCTTGCATTGCCACAGTACATTTTTCAAAACTAAGAAACTAACATTGGTACATTATCGTTAACTACACTCCAGACTTCATTGAATTTTACTACTTTTTTTTACACTAATGTCTCCTTTCTGTCCCAGGATCCCATCCAGGAACATGTTACATTTAGTCATCATGTCTCTTTAGCCTCCTCTGGTCTGCGGCAGTCATAGTACCTGGGATAGTTTCTCAGACTTTGCTTGTTTTTGATGACCTTGACAATTTTGGAAGATATTTTATAGAGTGTCCCTCAACTTGGGTTGCCTAATGTCTTTCTTTTGGGTTTTGAGGTAAGAATATCACAGAGGTGAAATGCTCTCTTTATCACATGATATTGGAGGGTTTTTTGATTTGTTTAACATAACCATGTCCTTAACACACCTAAAATCATTATTTGTTTTTTCTTTTTTTTTAGAGACAGGGTTTCTGTCTGTCACCCACAATAGAGTACAGTGGAACAGTAATTAATGGCTCACTGCAGCCTTGAGCGCCTGGGCTCAAGCAATCCTCTGGCCTCTACCTCCAGAGTAGCTGGAACTACAGGGGTGTGCCACCATGCGTGGCTATATGTATTTTTTGTTTGTTTGTTTTCTTTCTGTTTTTTCTTTTCTTTTCTTTTTTTTTGTAGAGACAGGTGTCTTGCTATTTTGCTGAGGCTGGTATCAAACCCCTGGCCTCTAATGATTGTTCTGCCTGGCCCTCCCAAAGTGCTGGGATTTACAGGCATGAGCCACCATGCCTGGCCCATTAATTCTTAATATCATCAAGTAACCAGTCGCTATTCATATTTCCCTGACCATCACTTAATTTATTTGTAGTTGATTTGTTTGAATCAGGATCCCATAAGTCCCACATATTATTACCTTTGGGTATTTCTCTTTTGTATCTTTTATTTTTTTTTTTTGGAGACAGAGTCTCTCTCTGTCGCCCAGGCTGGAGTGCAGTGGCATGATGTCAGCTCACTGCAACCTCCGCCTCCCGGGTTCAAGTGATTCTCCTGCCTTAGCCTCCTGAGTAGCTGGGATTACGGGCGCATGCCACCATGCCTTGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGGTTACAGGCGTGAGCTACCACACCCGGCCTCTTTTGTATCTTTTAATCTGTTAGTTCTGTCTTCCTTTTTTCCCTTCCTATTGAAGAAGCAGTTGTTCGTCCCTGTAGAATTCCCCACCTTCTCAATGTTGCTGATGGCATCTCTGTGGTAGTGGTTAGCATGTTCCTTTATCCCTTGTTTCTCCTGTAAACTTAAAGTCTATGCATTTAACCACTACTCCAGCTGCCTAGTGAAAGGGAGGAGATGACAGCACAGCACCCAGGGAACCTCTGAGACCTGCTTTGCTTCCTTTCCTCTTCCTTTTCTGGTCATTTCCTCTCCTGAACTCACTGTTTTTCCTTCCGGCCCAGACACCATGTTTGCCATGTTGGGGCCCCAGGACAGGAAACAAACACACATACTTTCTCCCATTTGTGTTTCAGTCCATCTGTAAATAAATTGTTGTCCAGGACCAGGCGCGGTGGCTCATGCTTGTAATCCCAGCACTTTGGGAGGCTAAGGCGGGCAGATCACTTGATGACAGGAGTTCGAGATCAGCCTGGCCAACATGGTGAAACCTGTCTCTACTAAAAAATACAAAAAATAGCCCTTCAAGATTCCCCCACATGGCCAGGCACAGTGACTCATGCCTGTAATCCCAGCACTCTGGGAGGCCAAGGCGGGCAGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGGCCAACATGGCAAAACCCTGTCTCTACAAAATACAAAAATTATGTGAGCATGGTGGCAGGCGCCTATAATCCCAGCTACTCAGGACTGAAGCAGGAGAATTGCTTGAACCCGGGAGGCAGAGGTTGCAGTGAGCCGAGATTGCACCATTGCACTCCAGCCTGGGCAACAAGAGCGAAACTCTATCTCAAAAAAAAAAATTGTTGTCCAGGTGCAGTTGGCTCATGCCTGTAATCCCAGCACTTCGAGAGGCCAAGGCAGGAGGATTGCTTGAGGCCAGGAGCTTGAGACCAGCCTGGACAACATAGTGAGACCCCATGTCTACAAAAAATTGAAAAACTAGCTCGGCGTGGTAGCATGCACCTGTAGTCCCAGCTACTTGGGAGGCTGGGGCAGGAGGATCCCTTGAGTCCAGAAGTCTGAGGCTGCAGTGAGCTATGATCACACAACTGCACTCCAGCTGGGCAACAGAGTGAGACCCTGTCTCAGAAAGAAGGGAAGAAGTTTTTTAACAACTTCTGGCGAGGTGTGGTGGCTCATGCTTGTAATGCCAGCACTTTGAGAGGCCAAGGTGGGCAGATTGCTTGATCCCAGAAGTTTGAGACCAGTCCAGGCAACATGGCGAAACCCCGTCTCTACAAAAAATATAAAAATTATCCAGGTGTGGTGACACATGCTTGTAGTCCCAGCCACTCTAGAGGGTGAGGTGGGAGAATCACCCGAGTCCAGGAAGTGGAGGTTGTAGTGAGCTATGATCGTGCCACTGCACTCCAGCCTGGGTGACAAAGTGAGACTGTGTCTCAAAAATAAAACAAAAATTCCTTGCTCCTTTGGAAGTCTCACTTATCTGCTGAGATGACTGGGGGTATGAGTGTGCTGGGGACCAAGGCCTAGTGGGGCAGAGCAGGCTGGTTGCACAGGGCTCCCTCTGGGGTATGGAGAGCTTGCTGGGCAGACAAATGCTTTCTTCACTTCAAGGTTGGGAGATTTGTGTGGGCTGAGAGTTGGGAGGCAGGGGGGATATGTCTCATAGTTTGCTTGAAATAAAGTTCTAAAATCACAGTACCTTGCAGGTGGTTATATATTTTAATCATTTACTTCCTATAGGCGAGACAGTGAGTTTTTTCTAGTGCTGCTCCTGGGCTGGTTTGTGCAGTGGAGAGGGGTCATAATTTCCAAGAGTCACACTGGGCAGGTTTTAAAATAGACACTGATGCCTGGAGGCCACACCCAGAGCAATAGAATCAGAATCCCTGGGTGTATGGCCTGGTTTTTGAAGTACCCAGGTGGTTCAGGGTGCAGCTGATTCAGGACTACTGGGCTGGCCCAGCCTTTCTGCTTTGGGCTGTAGGTTCAGCGAGTATATTATTCCTAATCGAAGAGCAGTAATTTGGAGGTCTGGTGTGTGTAGTTGCGGGGCGGTGTCAGCTTCTTCTGGGATCTTTGCCCTCTGCTGCTGCTCCCAAGGCCTGCTCTTCCCTGGGGGGCTTGCAGATGGGAGAGAGCTGGCTGGTGGAGGTGGGAAGGCAGCTGCTGCTGTAGGCCCTGGCTCCTGCTGAGAATTAGCTGACTCACCTTTCTTATGAAGGGAAAGAGAAGGAATCACTTGGCTGACTCATTCTTCCAGTAAAGAAAAAGGGGAGGAAAAACATCCACCGATTGTGCGATTGGGTAAAGATGGGAGCTGAATTTGGGAGGGAGGCTATACATTTTGAACTATTGAGAAAATAAAAATGAACTGAGACTGAGAAAGTATAACCTTCCTTGCCATTCATCAGACAGGGAGGACAGACACAGAGCCAGCTGCAAAGAAAGAATGTTTCTCACGAGGACCCACAGGATCTATAAAGTATCGAACAACCTTCTTCCAGTAACCACCTCTTTCATACTCATGTCTCACTCTATAAGGTCCTAGACTGCCAGGAACTTTGCTGTTTAAGTCATATCATTAGGAATGAACCATCTACCTCTTGATTGGCAGGTCTAAGTCACTTTGCCTCGGAGAATCAACCCATAGCTGCAAATAAGGGGTTTCTGGTCACAACGTTTCTCATTAATCTTAACTTTATAGTTTTTAAGGAAACAAGACCCTGAGTGGTTGGTCCAGACCTATGATGACTCCTTTTCACACAGTCTTGCTTTGCTTGGAGCCTATTGAAGCACTGCTTCATTTACATTTTACTCTATCTTCCTTAAATTATATACCAAATATTTTTCTTTGTTTGGCAAGGCACCCCATAATTCCTCTGCTGTGGTGCTTTTCTTTGTTGAGTGAGTCAGTAAATCTGACTTGGTCAGACTATAGGTTTGTCTCTATAGTGGGTGGGGTGGGGGTCTTAGGGCAATCTGTACCTGACATTTCCAATTCAGAGTCTCTTTCTTGAATCTCAGTCCAAATGTTTGCTGAAAAATTATATCTGGAAGTCCCTTTAAATATCTCAGACTGATATGACCAATACAGAGTTTTTATCTTCTTTCCACTTAATCAGTATGCTTCTTCCTGTCCCTATTCTGGTTAACAAACATTCATGTCTCACTAGAAAGTGAGGCATCATCTGTGGCTGCTCTTCCTCATTTCCCCACAGTCGGTCAGCCTTGCTACCTCCAGGACCTAGCACAGTGCTGGGCACACAGTAGATCCTCGGTAGTGGGTTGAATGATGAATGAATGAAGAGACCACAGGAGTCTGGTGCAGCTTCTGATCCTAAGCTTTATGCTTTCATCCTCTTGCATATACCCTCCTCTGCTAGGTAAACTCATCCATCCCTTGGTCCCAGCTCCTCTGGGACACCTCCTTGACTTAAACTAGGAAGACATAGGAAGAACTCTGTGTGTCCCCAGTATACTTCGCGATGCTTCATTTAAACTCTGATCAGTGTTTTGTAGTTACTTGTTTATAGTTATTAGTCTGTTTTGATGGGCTGTGAGCTCTTTGAGGGCTTGTTCATTTGGTGTCTGTCCCCTGAGCCTAGCTCATTAGGAGTTTGTAGGTGTCTGTGGAGCAAAATGCCTTATCTGGGAGTCTCCCCCAGTAGCTATGGTCGAAAGTGACACAAGAAGGCTGGCAGGGCTGGGACAGGATGAAGACCGTGCCAGACCATAGGACAAGTCAAAGGCTGAAGTTTCTGCTGGACCATCTTCAAGAAGTTGCTTCACTCAGGCCATTCTACTTCCAGGTTCTCTCCTCTTCCCCTGCTCATCCTCTTTCCTCCTTGGACCACTAGCTGCCATACTGTTACCCTTTCCTAATCCTGCCCTCCCTTCAAAGCCCAGCCCAGCTCTACCCCACCCAGAAGCCTTGAGGCCATTGGCTGCTCATCAGCCCACTCATGGATTCCTGTGGCAGAAGACCCTTCCTTCCAGATATGTAAGGAGACTTCGAGCCAGGGAGGATAAGGAAGGAACATTCAATAGCCCATGTCCTTCAGGAGCTCTTAATCAAGTATAATACTTAAAATATCAGTTCATGTTTTACTTTATTTTATTTTTGGAGACAGGCTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCATGATCATAGCTCACTGCAGCCTCGAACTCCTGGGCTGAAGTGGTCCTCCTACCTCAGCCTCCTAAGTAGCTGGGACTACAGGTGTATACCACCATGCCTGGCTAATTTTTAAAATTTTTTGTAGAGATGGGGTTTCACTGTGTTGCCCAGGCTGATCTCAAACTCCTGGGCTCAAGTGATCCTATCACTTCAGCCTCCCAAGTAGCTGGGATTATAGGAGCAAGCCACTGTGACTGGCTTGCATTTTACTCTAAATATGTATTTTTAAATGTAATATCATTTCTGTATATTAGGTATAATATTGATTTTTTTAATTTCAAAAGCAATTTAAAGATCTGGAAATATAAATCATACATAAGCCTATTACCCAGAGGCAATCTCTATTAGCATTTTAGTATATTTTCATCTAGCTTTTTTGAAAATATAATTTTTACCTTTTTATTTTGAAACACTTTTAGTCTTACAGAAAGGTTGCAAGAATAAGGAAAACTTCGCTATTTGCCTAGATCTACCAATTTTTAACATCACATTTCCTTTATTATTCTCTTTGTCTACAGGTAATCATAAAGTCTGAAAAGATAGCAAATATACATGGTATCATTAGGACATCTTCAATCTGCATTCAATTATAGTATCTACATTTCCAGGTTTTATGGCTGCCCTGTATTTTTACACATGTTATTTTTCTTCAACTATTTACAAATAGGTTGTATTCATTCATCTCCTAATACATCAGAGTATGTGACTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCTGTCGCCTAGGCTGCAGTGCAGTGGCGCGATCTCTGCTCGCTGCAACCTCCACCTCCTAGGTTCAAGCGATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGATTGCACTACCACACCTGGCTAATTTTTATATTTTTAGTATGGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACCCCTGACCTCAGGTGATCTGCCTGCCTTGGTCTCCCAGAGTGCTGGGATTACAGGCATGAGCCACCACGCCCGGTCCAGCATATATCTTTTAAGAACAAGGACATTCTTGGCCAGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTCGGGAGGCCGAGGTGGGCAGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTAACATGGTGAAACCCTGTCTCAACTAAAAATACAAAAAAAATAAGCCGGGCGTGGTGTCACTGGCCTGTAGTCACAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTAACTCGGGAGGCAGAGGTTGCAGTGAGCTGAGATCGTGCCACTGCACTCCAGCCTGGGCAACAGAGTTAGACCCTGTCTTAAAAAAAAAAAAAAAAGAACAAGGACATTCTCTTATATAACCGCAGTGTAGTAATTATATTCAGGAGACTTAACATGGATACAACACTTTTATTAACCTATGGTCCATATTCCACTTTTGTCACTTGTCTCAGTAATGCTCTTGAGAGCATTCCCCCCTCTACGCCAGGATCCAATCCCGAGTTACACAGTGCATCTAGTTGTCTCTTTAGTTTCTTTAATGTGGAACAGTCTCATTCCCACTCTTTCTTTGTCTTTATGACATTGACATATTTGATGAACAAAACCAATTAATTTATGGAATGTCTGTCAGTGTGGGTTTGTGTTGTTTTCTTGTGATTAGATTTATTTAGTCCCTTTGGAATATTATGTGAGTGATGCTGTGGACTTCTCGGGGTATCACATTTGGAAGAACACAGTGTCCCACCTGCCCTTCGTTGATCCTTTTAACATATCCCCATCATTTTTTGGGGGTAAGACTTCATTACTTCCTGGTGCAACAAAATGTACCAGTTTCATCTTGTACCCTCCCTACCCCAGCCTTTGAATCCGCTCCTTTCCTAAGGAACCCTGGTCTCTGTTAGTGGACCAGGATCTGGATGTCATTTGGTCTTTTTGCTTTTCACTTAGTATCTGTCTAGCTCTGTTTATCCCCTTGTTTATTGAGTTGGAATCACACTGCTTATATGCATTTCATAAAATTTTAAGCATTATTCCATGTCATAAATGTTTGAAAACATAGTTTTAAAGGCTGCATAGTATTCAGTCATATGAATGGACCATCATTTATTTAACCATCCACCTTTGTAAAGAATGCAGCAGTGAATATCCTTGGTATGTACACCTGACCAGATCTTTGAACATCTTGGATTGTTTCCTTAGACTACATTCTCAGAGGTGAAATTTTGCCAGGACAGCATTGTGAGCCTCCCTTATGTATGTCTTTAATGGGAAAATGGTCTGGGCTGTGTGGATTATAAGAGGTTAGAGAGGCAGCTGTTTCTGTTAGGAATGGACCAAAGCTTGATCTGGTTTGTGAGAGACAGCACCTGGGTAGGGGTGGCATTAGGGGTTAGAGGTTGCTTCATGCAGGGGTGCCATGGTGGGAGAGAAATGGAGGTGGGATGAGAACTGGTGTGTGGGGGGACTTTGAGGTGACCTGGAGCCTATTGCAGGGTCCTTATTGGGAAGGGAAAGGAACAGGAATTGGCTGCAGGGTCTGGTGTCCTACTAAATAAGGGGAGGGAATGTGGAGGCTTCTGTTTCCTCCACTGTGCAAAGGATGGTGCTTGGAGAGTTGTGGGGCTCCAGGGAGGAATTTGGGGCAGAGCCCGGAGTGTAGTGAGGCATGAACCCCAGCGATTGCAGCTTCCCCTTCATCCCCGAGCTTGGCACCCTCTGTCTTCCCCTTGAGCTCAGCTTTGCCCAGCTGGCTTAGTCCCCAGGGCAGAAGGCCCAGCAGCCGGGTTGCTTGGTTTCCTTTCATTGTGCTCCAATGCCTGTGGCTGCGCTTAGCATAAAGCCCTCCTTTTCCACGGCCCCTGCTCTGGGGCAAGGTTGGGGGAGCTGCCCCTTGTCCTGCACTTCAGCAGCTACAGGGCTGTGGGTGAAGGAGGGCCTGAGGATTGTGAGCTCAGTGCTTTTAGGCTTGAGCTGCCCTTGGGGATCCCCCCTGGAGGCAGAGCTGGACCTTGGGGAGGGACCCTGTGGCGGGTAGGCAGGATGCTTTGTCACTCAAGGTCCTGAGCAAGGCAGGGAGGCTGGGAGAGGGCTGGGGACCAGGCCTCACCTTCAGCCTACATGTCCAGGGATGCTTGGGAGCTTTTAATAGGCTCAGAATAGATCTCAGGGCACTGGGAGAGAGAGGGGAAAATGGAAGTCACCTGGAAGAGCAGATGGGCCTGTCCTTGAGTATCTCAGTGGTCTCTCTGAGTTGACTTTGGAAAACTCTCAGCCCCAGGAAAGCTGTCCTTAGATTTCTGAGGCCTCATTGGCATTTATCACCCACACGAGGAGTCCTGGGGACCGGGGGACCCCAATCATAAAGGGTGGGGCTCTCCAGTGTCTGGAGAAGGGTGTGCAGCAGCTGATCCATTCACTCTTCTCTCTCATCCTCTTCTTCAG
Seq C2 exon
ACGTCCTTCTATGGCCGCTTCAGGCACTTCTTGGATATCATCGACCCTCGCACACTCTTTGTCACTGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000144040:ENST00000272433:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.228 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0382012=Mtc=PU(0.6=5.9)
A:
NA
C2:
PF0382012=Mtc=FE(34.9=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains