HsaINT0153453 @ hg19
Intron Retention
Gene
ENSG00000188687 | SLC4A5
Description
solute carrier family 4, sodium bicarbonate cotransporter, member 5 [Source:HGNC Symbol;Acc:18168]
Coordinates
chr2:74512900-74531807:-
Coord C1 exon
chr2:74531616-74531807
Coord A exon
chr2:74513030-74531615
Coord C2 exon
chr2:74512900-74513029
Length
18586 bp
Sequences
Splice sites
5' ss Seq
CTCGTGAGT
5' ss Score
8.41
3' ss Seq
CTGCTGCCCCTCTTTTGCAGGGT
3' ss Score
11.2
Exon sequences
Seq C1 exon
AATGCCCTCCTATCCACATTGGGCTTCCAGTACCCACTTACCCTCAAAGAAAAACTGACCAGAAGGGACATCTTTCAGGCCTGCAAAAAGTCCACTGGGGCCTGCGGCCAGACCAGCCACAGCAGGAACTGACTGGCCCAGGGAGTGGGGCAAGCAGCCAGGACAGCAGCATGGATCTTATCAGCAGGACTC
Seq A exon
GTGAGTTCCTTGAGGGGTACATTCTGGGGAGCCATCCTGCTGGTGTGTCCAGATGGGACCCAGCAGGGCAGGGGGGATTTTCTGGAGAATGTGGGTAACGCTCCACATGGCTCAGCCTAACCTCTCTGGCCCCCTCTGCTCTGCTTCCATTGTTGGCCAACCTTCCTGCTCACTGACACTTTTGGTCAGACTGACACCCTGTCTTTCTCTGGGGACTTTGAGACCTCGACTCTGATCCATTCTATGTTGATTTCATGGTTTGATTCTCAGAATTATTTCCCTCATTTCCAAATTCCAAGGACCATACGGTCATTGCCCTAAGAACCAATAATGGACATGCGGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACGAGGTCAGGAGATCGAGACCATCCCGGCTAAAACGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTAGTGGCGGGTGCCTGTAGTCCCAGCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACCCGGGAGGCGGAGCTTGCAGTGAGCCGAGATCCCGCCACTGCACTCCAGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAATAATAATAATGGACATGCTTGTTTTGTATGAGGCATTGTGCTCAGTAAATTGAAGTTCTTGTTACATTAGCTCCACCCTCTCTCCTCACTGGAGCTGAAAGACCTGGTACAGAATTGTGTAGTCACCCTGCACGGTAGCTTGCAAGACACCTAGGAAGCTTTCTTCCAGGACAACAAAGCCCCCAGGCCTTCCTCTGCTCCTTCAGAAAATAGTTCTGGGCTAATTAAAAATCAGTCTTTTGCTCTTTCCTATGGAAAGAAAATGATCAATCTTAAGAGGAGTAAAAAGGACTGGAATCCTTAGAGCACAAATGTGACATTTTACTGTGACTTTACTGATGTTTCTGGGGACGTGATTTCACTCTCAGCATATCCCAAACCTGCCTAATAAACAGTATGAATTTGGTTTCTACTATATATAGCTCACTGTCTTGAGTGTGGAAAAGTTGGTTTATTATACCATCTATACCTTCCAAGGAGTGTCAGAGGCAGTGACTGCATCTTAGTATCCTGGCAGGAGACCTGATGCACCTGCTCTCACAGGCCATGGGAGCTACCCCCAACCCTGCAGAGCCCTCTACAACCCCCATCATTGGCATTAGGTTGACCAGGGCCTGTGGCTTTTACAGAGTAAATGTGCCTTTGTAGGAGATGGGGTAATGGTAAATCCTTTGGAGGAGTCCAGTGTAAGAGATGGGCTATAGTTAAAATACAACACACACACACACACACACGCACACACACACCACATGCACAGGCATACACAGACACACACCACACACACACAAAAAAACACTTCCACATGCACACACACACACACACACACACACACACAGTCCTGCTCAGGAGTGGGAACATCAGAGACCAAGAGGAAAGCAAGCCTGCTGGGAAGACCTCTTGCCCCCGTGTGGGTTCTGGATGCCTCACACATACTGACATGGTCTCTGAGATGTTCCCCTGTCACCTCACCACCTCTCCTACATTCAGGATTGAGGTCGTCCTTGGAAGGTGGAGTCTGCTGGGTCCTTCCTGAGCCAGAGAAGAAGAAAGCAGTTTAGATTTGGTGCCCTCTGCTCAAAGAGTTTAGAAGAGGTGACATAGAACATCACAGAAGTAGTTATAGATGGTGGATTTGACATTGCTTTGGTGGTGTCTTGTTCAGTTAAGTGGACACTGATTTTAAATGCAAACCAAAGGAAAAAGAATGTAGAACGCTTTGGCATATATATATTTTTGAGACGCAGTCTCATTCTGTTGCCCAGGCTAGAGTTAAGTGGCGCGATCTCGGCTCACTACAACCTCTGCCTCCCAGGTTCAAGTGATTCTCGTGCCTCAGCCTCGCGAGTAGCTGGGATTACAGGCACGTACCACCACGCCCAGCTAATTTTTGTATTTTTAGTAGAAACAGGGTTTCACCATGTTGGGCAGGCTGGTCTCGAACTCCTGACATCAAGTGATCTACCTGCTTCAGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCACGTCCAGCCCTTTTGGCATATTTGTACCAAATATATTGGTGCATTTCCTTCACCGTCTGCTCTTCCTATACTATGTGTGTGTGTTACTGGCTTGTTCCCGACAGGGCTGTGGAGTAGGAAAGGGAGAATGGGAGAGCCTAGGAGGACAGGGAATTGTAGGCCATGTCTCATAAGCTGGAGTAAAGTAAAAACCCCTTTTAAAGGGAAAATAAAGTCTTGTGTACCCATGAAAATGCATTTGTATATTTGTAGGGCCCCAGGAAGCCACATATTCCAATTTGAGAAATAATCTAACTAATTAGGGTTTTATTCCATAAAAATATCTTCCAATTATGAATTATAACCCAAATTTTGCTGTTCCATCTAATAAAAGGAATATTTTTAAGATTATCAAAATGGAAGCAAAATTTAAAAGTTCAAGTAAAACCTTTCTACCCCTGAGAATACATTCCAGACCCCAGTTCCAGACACTCCGGTTTAAGGAAGCCACAAAGCCTGGTAACAAAGTCACCAACCACAGTGATTTTTCTGCAGCCCATGGGCATTGAGTTGGTTTCTGCTGTTCTTCACGGAGTGGAAGTCTCAACCCTCAGTCTTTCACTTCTAAGCAAAATGGGCATTGTATGTGTGATACAGATATAAACCTTGCTCTTGCCACATCTCAGGGATAGTGCCAATGCCCTGCAGAAGTCAAAATAAAACAGCGCCAGAATCATTTTACCTGCCTCATCTGGATAATTGTCTGAATCTCCCACTTCTCTTTGCTGTAGGACACCTGACCACATATGTTTTTCCTCTCTGAGTGTCCTGTCTGTTCTGTAAATCCATCCAGACACCTAGGCAGGGGGCCCAGCTGGTCTGGCTGCATAGCCCAGCAGGAACTCCCACTTCAGAGAACAGGGGCATCCTGCAGAGTATGAGGGGCCTGGGCCAGGCAGGGTGGCTAGATGTGTCTGGGCCTGAGGGTCAGGCACACTATGCAGATGGAGGATTGAGCAGAGACCCCTTCAGTTCCTGCCTTACAGAATAATGGCAAAGATCCAATAAGACAGTATATGTGAAGGGGCTTGGTACCTGTGAAAGCCCCCTGAGAATGATAGTTCAATATCATTTTTAACTAAATGTATAATATTAATAATCATAACTATAAAGTTGAAACAAAGGCCAGGTAGCTGACTTTTATTCCTTCCACAGAGACCCACGAGGGTGGCTTTAATATATGCTGCAAGGTTCCTAACCTCCAGGACAGTTTTGAAATACACAATCCAGCTGCCTGACGTGTTAGATGTGAATGGGGCTTGGGTGTCTGTACTTTTCTATTAAGTTCCAGTGTACCTGGTTAAAAAATACACTATCCTAAAGAAATTTGATGCTTCCTTGAACCACATTTAGCTTACAGAACCCTGTGAAGTCCCTGCTTTAACTCTAGTTGAGGCCCAAGTAACTGCTGGTCCTCATTCCCACAGCAGGTCAGGGGCAGGAAAGAGGCCAGCCCAGGCATCCTTGTCCTTCTTGTACTGGCTCCATGCGCTACATGGAAAGCAGCCCCTTGCTGCAAAGTTGCTCTCTGGATCATGTCAGAGCTCCTTGGAGAAAATATCTTGCACCTGGAGATGACAGACCCACAAACAGATAAGCATAAATTGGTGGGAGGTGCGTTGATGGAGGTCTGCACAGGAAACTATAGGAGGAGAAACAGGAGCACATAGGCCTAGGTGGTGAGTGGTGGCAGAGGGGGCAGCACAGGCTTCCTGGAGCAGGTGACACCTGTCATGAGTCTTAAATGATAGGTAAAAATTAGCTAGAAAAGGCAGCTGGGAGAATTAAGGAAAAGGAAATTCATACATTTCTCTTTTCTAGCTTTATTGAAGTATAATTGACAAAATTATACATGTTTAAGGTATAAAACATGATTTGATATACATACACATTGTGAGATGATTACCACAATCAAATTGGTTAACACCTTCATCACCACTCATAGTTACCTTTGTGCGAGTGTATGGTAAGAACACTTAAGATCTCTCTAAGCAAATTTCAAGTATGCAATACAGTATTATTAACTATAGTCACCATGCAGTACATTAGATCCCTGGAATATTTTTATCTTTGACCAACATCTCCCCATCTTCCACATCCGACCCCTGGTAAACACTGTTCTGCCCTCTGTTTCTATGAGTTCAACTTTTTCAGATTCCACATATAAATGAGAACATGCAATAGTTCTGGCTTATTTCACTTAGCGTCATGCCCTCCCGGTTCTTCCATGTTGAAACAAATGGCAGAATTTCCTTCTTTTTTATGGCTGAATAATATTCCATTGTATATATTTGTATATGCCACATTTTCTTTATCCCTTCATCTGTCAGTGGACATGCAGGTTGTTTCTGTTTTGGCTATTGTGAATAATGCTGCAGTGAACATGGGCACGTGGGTATCTTTTCAAGATACTGATTTGGCTTCCTTTGGGTGTATACCCAGAGATGGGGTTGTTGGATCATATACTAGTTCTACTTTTATGTTTTGAGGAACTTCCATATTATTTTCCATAATGGCTGTACCAATTTACATTCCCACCAACAGTGCACAAGTGTTCCCTTTTCTCCACTTTCTTGCCCATACTAGTTATCTTTTGCTTTTTGTAGCCATTCTAACAGGTATGGGGTGACATCTCACTATGGTTTTGGTTTTAATTTGCATTTCCCTGATGATTAGTGATGGTGAGCACTTTTTCATATACCTATTGGCTATTTCTTTGTTGTATTAGTCCATTCTCACGCTGCTAACAAAGACATAACTGAGACTGGGTAATTTATAAAGAAAAAGAGGCTTGATGGACTCACAGTTCCACATGGTTGGGGAGGGCTCACAATCACGGCAGAAGGTGAAGGAGGAGCAAAGGCATGTTTTACATGGCAGCACGCAAGAGAGAATGTGCAGGGGAACTGCTCTTTATAAAACCATCAGGTCTCATGAAATTTATTTATTTATTGAGATGGAGTTTCGCTCTTATTGCCCAGGATGGAGTGCAATGGCGCAATCTCAGCTCACCGCAACCTCTGCCTCCCGGGTTCAAGCAATTCTCCTGTCTCAGCCTCCCGAGTATCTGGGATTACATGCATGCACCACCACACCCAGCTAATTTTTGTGTTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGGTCTTGAACTCCCAGCCTCAGGTGATCTGCCTTCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCGCCTGGCGAGATTTATTCACTATCATGAGAACATGGGAAAAACCCACCCTCATGATTAAATTACCTGCCACCAGGTCCCTCCCATGACACATGGGGATTATAGGAGCTACAATTCAAGATGAGATTTGGGTGGTGACACAGCCAAACCATATCATATGTCTTCTTTAGAAAAACATCTATTCAGATCCTTGGCCTTTTTTTAAGGGTCTCACTGTGTTGCCCAGGCTGGACTTGAACTCCTGGTATCAAGCTATCCTCTTGCCTCAGCTTCCTGAGGCACTGGGACAACAGGCACATGCCACTGTATCTGGCTTCCTTTGCCCATTTAAAAATAGGATTTTTTTCTTTTTGCTATTGAGTTGTATGAGTTCCTTATATATTTTGGGTATGAAGCCCTTATCAGATATATGGCTTGCAAATCTTTTCTCCCATTCTGTGGGTTGCCTTTTCATTTTGTTGATTGTTTCCTTTGCCATGCAGAAGCCTTTTCATATGATATTGTTGCACTAGTTTATTTTTGCTTTTGTTACCTGTGCTTTTGGTGCCATATCCAAAAGAAATCACTGCCAAGACCAATGTTAAACAACTTTTCTCCTGTTTTCCTTTAGCACTTTTATGTTTTGAGGTCTTACATTTAAGCCTTTAATCCATTTCAAGTTAATTTTTTGTCAGTGGCATAAGATGGGGTCCAATTTTATTCTTCTGCACGTGGATATCCAGTCTTCTCAACACCATTTATTGGAGAGACTAATCTTTTCACCTTGTGTATTCTTACCACTCTTGTCAGATACTAGTTGACCATGTATGTGTGCATGTTTCTGTGCTTTCTATTATATTCCCTTGGTCCACGTGCCTGTCTTAATGCCAGTACCATACTGTTTAGATTACTATAGCTTTGTAATATAGCTTGAAATCTGGAATTACATCTTCTCAATTAATCCTCACACCAACAGTAAAAGGGAGATATTATTATCCCCATCTTCAGATTGTGAAACTAAGATTCAAAGAGATGTAGCATAATGCAGATGTTAATCAGTGAATGTGGGAAATAAAAACAGATCTATTGACTCCAAAGACTGTGCTTGCCCTTTCACTACATTGCTTTCCTTTATAAGATGTCATTGGTCAGTCACCATATTGGACCCTGGCTGATAATGATGTCCTTTCAAGTAGCCAAATTGCCTCATGTTGAAAGGAATAGATAGGTAGGAAATAATAGGCCATAGCAGTTGGTTTATTTATTTTCTCTCTCTCCCTCCTTACCACACCTTCCCCCAATGTGAATATATTAATAATTTAGGAAGTCAATACTTAGTAGCCAATCAATTTTGACTGAAGCAGAACTCATATGATGAATAGAATCATCAAGCTGTGGTGAAAGTCAGTAGGAGCCAGGGTTTCTACCCTGGGGGGAAAAAATGTGTTTTCTGGCTGTGAAAACCTCTTGAGAGGCCATTAGGAGAAAGAGGATTAGAAGCAGCTTTAGAAATGTGGTTGCACTTCCACTTTTCTAGGCTGCTAATAAGAACTGGAGCCAGTTTAAGAGAAACAAGGTCAGTCAAGCCCAACTGGGGTGTGTAGACCCTGGAGTCTCAGTATTCTCATCTGGAGAGTGAAAGATTGTTGCAGGGTGGCCAATTGTTTCAGTCTGCCCAGGACTGAGACTTGTCCCAGGATGAGGGAGGAAGGACTTTCAGTGCTAAAACCAGATCGGTCCTAGGCAAACTGCATGGTTGTTCATGCCAGATTGCTACGAGTTGTTAAATGAGAGATAAATAGATATTAGATACCTCACATGGTGCATGGTGCATGGTAGGCACTTAACATATAGTTGGTTCACTTTATACACATTAACCCAATTTAAGAGCACCACGCCCAAATCTTTTTCCTCTAAAGTGGGCATTTGTTTGATTTGGCTGCCCTCGTTGGTACTGAGAAGCTTATGAGATCCTTCTGATGGAAGGAGTGTGAAAAATATTCAAGCCTTCATCTATTTGCCAGGTATTGAGCAGCGCTGGGATCACCAAAAGATCAAAATTACCCTAAGATGAGAAGTAAAGGAGAGAAAGGCTTTCTATTAAGACACTGGAACCTCACAAGGTTCCAAAGCCTTAGGACCAAAGACATGTTTCATGTTGTCTTTCTTTTCTGATAAGAAAGGAGCCAAGGGTTAGGATAGAAAATAAGTTTATCTCTAAAACATCTCCTGCACTAAGGAGTCCCTGAGGCAGGCCACGTTTCAAACATGGGAGCAAAGACAACTGGCTTTCTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCTTGCTCCGTCACCCAAGCTGGAGGGCAGTGGCACGATCTCGGCTCACTACAACCTCCGCTCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCACCACACCTAGCTAATTTTTTTTTTTTTTTTTTTTTTTGTATTTTTAGTAGAGACGGGTTTCACCATGTTGGCCAGGCTGGTTTCAAACTCCTGACCTCAAGTGACTCAAGTGATCCACCTGCCTCGGCCTCCCAAAGTGCTAGGATTACAGACGTGAGCCACAGTGCCTGGCCGACAATTGGCTTTCTTTTAGGGTTTGAAACTTTAAAATTGGGGTGGCTTCCTCACCTTTGTCTACTTAATTTGGATCTTGAAGGAAGTGGTGAAGAGGGGAGAAGTGAGAAAAGAGAAAAGGAGGAAGAAAAAGGAGAAAGGATAAAGATCATTCTAGACCTTTTATGCTCCCCCCAACCCTGGGGCTGGGGAAGGAAGACAAATTAAAATTACCTCAAGGAAGTCTGTTTCTACACCACTCTCTTCTTGCCCTTTAACACCTTAAAACCAAGATCGCCCCGAATTTTCAACATATACTGCATTCCCTCCCTAGCCAAGAGGGCTGTTCTCCTAAAAAACAAAAACAAAACTCAAGCAAAAAACCCTACCAGGAGAGAATCTTGAGTTAGTGACCTTAAGACCTTAAGGGGAAATGGGTTGAGAGCCTGAATTTGCAAGTGAACCAATGAAAATCCTAATATAAAGTTTTTATAACCTTATTCGATGTGGTTAACTAAAATAGACTCCAGCCTCCTCGCCACATTCTAGAATAGGCCCACACCTTTGCTTAAATGTCTGTGAATTTCCAAAGGCTTCTAGTCTCAGCGTTGCCCTGGCTCCAAGTCCCTGCTTGGTGGACTCAGTCTCACAGTGCTTCACCTTTGGCATCTGTTCTCTGCTTTCACCTCCAGGAAAGCCCAGGTATGGAGTTCTGCCCTGCTGTGGTTTCCTCAAAATTGGTCGTTTAAGGCACATAGGTGAGCAGCAGGCTTTGTTGAAGGTTCAGAACCATGGAGGGGGTTTACTTTGTAGAGATACTCAATTTTTTCTTTTTCTTTTTTGTTTTGTTTTGTGTTTTTTGTTTTTGAGAAGGAGTCTCCCTCTATTGCCCAGGCTGGAGTGCAGTGGTATGATCTCTGCTCACTGCAACCTCTGCCTCCCAGATTCAAGCAATTCTCTTGCCTCTGCCTCCCGAGTAGCTGGGACTACAGGCACCCGCCACCACACCTGGCTAATTTTTGTATTTTTATCAGAGGCGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAATGATCCACCCACTTCGGCCTCCCAAAGTCCTGGAATTATAGGCATGAGCCACTGCACCTGGCCGAGATACTCAATTTTTAAAATGAGATATTAGATATCCCTGTTCTTAAAAATCCTCTGGCCACTGAAGGTTTCCCCTTGGCCACCTTCCTCTGTAGTTTCACCTTCCTACCATATTTTTGGCAACTCCCACCCCCCATCACTGCCCTCCTGAGTCTCCTCGTATCTCCTTGCTTCTCGGTTTCTGAGCCCCCTCTCCTCAGCGCCCCCTCTCCAACACACACACACTCACTCCACTCACTTTACCTGTCATATGATTTACCTCGGTCTCTCTCACCTTAGCTCAGAGCCCATTTTCACCCAACTGGACTCATAATGTGTTGAACTAAACACAAAGACCATCTATCAGTCTAGCGCTTATGCAGCATAAAAGAACTGAAAGAGGGCCAGGCATGGTGGCTCACACCTGTAATCCCAGCACTTCGAGAGGCTGAGGCAGGCGGATCACTTGAGGCCAGGAGTTTGAGACCAGTCTGGCCAACATGGCGAACCCAGTTTCTACTAAAAATATAAAAATTAGCCGGGCGTGGTGGCAGACACCTGTAATCCCAGGTACTCAGGAGGCTGAGGCACAAGAATTGCTTGAACACTGGAGGCGGAGGTTGTAGTTAGCTGAGATTGCGTCAGTACACTGGGCGACAGAGCAAGACTGTGTCTCAAAAAAAAAAAAAAAATCCAAAAAACTGAGAGGCCTTTAAATTTTCTTCTCTCCTTTCTCCGTCCCCACTGGCCTCTGTCAGATGAAAGAAGCGGGATCAAGATTCAACTTCCTACTGATATCATTAGGCTCCATACCCCTCTTGGCTTGGAAGGAAAAAGCAGAGCAACTGTTCAGTTTGATTTTAAATGACAGCTTCTTCATTATACTGCATTTATATCTACCAAAACAGAACAATAAGGACAACATGCAAATTGAAGACTCTTGGTGACATTTTTAAATCTTAAATCATGAGTAATAATTGCCTTTTACCCTTTTGGTTTTCCAGAAACGTCTGATTCTCCTTCCCTTGTGCGCCAATGAGATGGATGTCGTTGTTCTCTTTTTGCTGTTGGGTCTTATAATGCTCGGGGCCTTTCTGATTTCACACTGAGGTTGTTGCCCTTCCCAGGCCTGGTAGGTCCAGAGTGGCGTAGGGAACTCAGATGGGAAAGACGGAGGGATCTCTTACCTGAATTTCTCAGCTAGCCTTGACTGAGTCTCCCCTGACCCCCAACATACTTAGGCCTTCTCCAGCCTTGGCTCCATCCACAAGCACTTTTGGGGGGCTGGCCATGCACATGCCAGGCTCTGCCAGCCCCTCTGACCCAGCTGAGCTTCCTCCCTTATCCAAGGTCACGGAGTGTTTCCTTTGCCTCTCTTTCTTTCTTTAGGCCTGCCCTGCCTTTTTTTACTCCCCGCTCTTTTACTTTTCACATGACTAGGCTTAATCTAACTATTCTTATGACAGTGACTCAACATTCTTTTATAACCTTTACACTTATGGTTTTCAAGAAGGTACTCAGAAAAAAATCTCCACACTCTAGAATTTCATACAAAGGGGACTCATGATTAAGAAGGTAATTTTATCACAATGCCAGAAACCTATTTGAACTGGCTTGGGGAAGCAGAGAGAGAAGGGGTGTGGGGAGAGATTGTTTATATTACAAGAACAAAGGAGTTTCTCACAGTCCCAAAGCAAAACGAAGAGCCGGGCTCAAGTGGGTGAGCGCAGTGCCTTCTCAGCCCCCTCTCTGGGTGTACACAGCCCTTTCCCACAGCTTCGCCTCTAGGCTGCTTCCTCTCTTTGCAGCCCAGCCCTTTCTGCCTCTTCCATTTACCAGCTCTGTCTCCCAGAAACCATCAGGAAAGGCCCAGCTAACTCAGAGACCCAATTCAAAATTCACAGGCTTGGGACAGGTGTCCAATGAACCATTCCTGCTCCAATTCATTGTGGCCAGGAGCACAGGTCACATGTCACACAAATACAGCTGCCCAGGGTCATCCTTATGGGAGGAGGGGACATGGGCTGGGCAGACATTCCAAAGCCACCCACCCCAGGAAGGATTCCCGTGAACACAGCAAGTCAGCAGATTCTCTCCTCTTCCTCTCTCAGAGGGCACACTTGGAGTTTGTATACAGCCTTCTAGAAAAAGAATGTTATTGCCCATGAAACTAGGACTCAGGGCCTCCAAGACCTACTTCACACAGTTGGCAAGAATGGTTTTGGCTCCTTTGGGTTCCCTCTCCCAGTCCCCAATAGTCAGTGGCCTGGAGTCACCCGAATCCCCCCATCCCTGCCCCCTCTGCTTCACCCTCAGCTCCATTTCCTTGTTCTTGGCTCCTCTCTTGCTGAGGCCAGCCTCAGCAAATATACTCCCGAGTGTCAGGCAGTCAAATCCATTCACCCAGCAAATATGCATTGAGTACACATGCTGTGTGAACCCATGTCAGGGGCCAGCAGTGCGATGTGAACAAGATAGGCCCTGACCTCACAAAGCTGACCGTGTAGCCACCCATCAGGGAGCCGATGAGAGAGAGAATGTCTGAAAGGACTTGCCCAGAGCTGAGGACCCCAGGATCGTGTCCTGATGTTGACTTCCAGATGGCCATAATGGCTCCCAGATCTTTACTAAGAGTTGAAGTCCACACTGCTTGCTAGTTTGCAGGCCACTAGATCATTTTGTGCTAAGTCAGTCCCCACCCAGTAAAAGCATGATTCTTTGTGTGGCTTTAGTGTGCCTCCTGAAGCGGTCCCCATGGAGGTTATGTTTCTCCCAGCAACTGCTGTTAGAATCCATTCCTATAGTTGGGCTGGCACTTTGTGACTCTTGCTGTTAGCTATAGAACAGAGGGGCTATTACCTGTGGCATTTCTCATTATGTGGATTAACTTCTGACGTGCTGCACACATGTGGGATCCGCAGGGCATTAGAGAAACCCTGACCCAGTGGCCCAGCATGTGGTGAGCTAAACCTTCTGTGGGCAGAAGGGAGGGGCAGAGACAGCGTAGGGGCCTGGGATGGAGGGCCAGAGGTAGCATGGGAGGAGCATGGAGTCTAGAAGCTGAGAAGGATTGGGCCCTTGGAATGTTTAGAGGGAACAGGCTGGTAACTGGTAGTAACAGAGGAAGCATCTCACCTGCTGGCATCAACAATAATAGCAATATCACCTATTGAGTGACTGGTGTACACGAGTGCTGTGCCAGCCAGTCACATTACATGTATTATCTCATTGAATCCCTGCCACAGTCCAGTGAGGGGGGCGTGATTATTACCGCTTCATAGATGAGGAAACTAAGGCTCAGTGGGAGCTTGATGTCTTGCCAGGATCCTACTGCTAGTAATAGCAGAGTCTGGAGTTGAGCCCAGGTCTGGGCTCTTAAAACACCACATGAATAAAGAGGGTCTTTTTGGGATCCTTGGCCATCTTTTTTTGGGTATTGAGGCCACCCACAGGGCCTGACTTGGTGTGGCCTGCTGTGGCCACTCAGAAGGAGCTGGGTCAACCTCAGCCACAGTGCAGTGGAAGCTGCAGAGCCTGGGACCCTCAGGCAGGGCCTGGTGTCCTCTGCTTCTGTTTTCTCAGCTTTAAAACGGGCATACTTGTGGCCACGTGTGATGGCTCACACCTGTAATCCCAACACTATGGGAGGCTGAGGCGGAAGGATTGTCTGAGCACAGGAGTTCAAAACCAGCCTTGCAAAACATAGCAAGACCCTGTCTCTAAAAATAAAATAATAAAATGGGCGTACTTGATCCTCGAGCCTCAGGTATGAAAATGTCACCAGTGGAGCCAGCCTCAATGGGGCAGTGTAGGGGGAGAATGTCAGATGTCTGTTCTCCCCCAGGCTCTGCTAACCTGTGTTGGGGCCTAGGGGGCCTATGGGGTAAACTGGGTCTTGGTTTTCTCATCCGTGAAATGAAGGGTTTGGACTTGACCATCACTAAGCTCCCTCCCAGCTCTAAGACTTAGTGAATTCAGGGTTTGTAACTCCCTGGAGCAGCCACCACTCAGTGACCTCCAATCAACCTTGGCACATTCTAAGTACTCAGTAAGCACTTGTTAAACCAAACCCAGGAGATTAGGAGTTTCTCAGAAGAGCAAAATAATTCCCCAGTGGAGTTTACCTCACACTCTGAAGTGACGAGCTTCCACTGTCCGTGGGCTCTCAGAAAACACCTGCCGAGTGGTGACACTTGGCACTTTGCCTGAGAGGTGGAGGAACAGGAAGTGTATCAGGAGTTTGGGTTTAAAGTTGGGGAGGAAAGAAACCAGCTACATAGCACATTATCGAGCACTGCTTGGTCAGTGTGAGACCCCACAGCAAACACTCCCCTCCAGCAACCCCACTCCACCTTTGGGGCTGTGTGGTGGAGAGGAAGGGCCCTGCTAGGTTCCTCTCCAGCCAGCTCACCTGCCACCAAGGCTCCTAAGGAGGCCCTGGGGAATCTCACAGCACATCCTACCCCTGCCTTTATAAAGGGGCCTGCAGAGAGGATCCTGGGCTCTCCTAGAGACCACAGGCACATAGGAAGCACTCATGGGGAAGGGGGTAAAGGGGCAGTTTTGCCAGTCCTCTCACAGGTCCTCAGCTGCCACCACCCCTGCTGCTGTGGAGACCCGGCTTCCTGCTTGAGGTTCTGCTGCAGCCACTGAGCCTTTCTCTCTCTAGTGCACCTGAGATTTCTCTCTCACCCTCTCACTTCTCTCTCTCTCTTGCTCACTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTTCTCTGTCTCTCTCTCTGTCTCTCTCTCTCTCAGATCTTTAATTAACTCAGTGTAGCTTTTCTCTCTCAAACACTTTTGCATAATCTTTCTCACACTTACACTTACCACACCTATATTCTCTCTACATATAGCCTCTCTCTCCACCTCCCCAGTCCTTCACACATTCCTTTTCTCTCTCTCTTTTTCTCCCCTCAAACCCCCCTTCTTCTCTCCCCACACCTCCCCTGGTGCTTAACTGGAAACAAAAGTGAGTTTGTTGTGTGAAGAAGAGGACCTGTGGAAGTAGCAGCCAGGGAGGCAGCAGCGGAAGCAGGCTGGGGCCAGAGGCAGCATCGACAGCCAGGGACCCCAGCGCTCAGCTGTTCCAGGGAGCAGGTAATGCCCCAGGCAGAACTGGTTTGCATCCTGCTCTCTGCCTGTCTCCTCTCTCCAGGACCTGTCCATTTATTTGCCTTCTTGTCTGGCCTTGAAGGGGAAAGGGGATTCCAGACTTAGGGAATGGCAGGCACAGGGGCCCAAGGAGTAGCATGCCCTCCTCTTCAGGGATGTGGTCTGCTGTGGCTGGGGTCGGGGTGGCTGGGTGAGGGACATGCTAGAACCTAGAAAGGCAGGTTAGGGCTATATTATGAGGGGTGGTTTGAGCCATGTCACTGACCCCTAGGCTTTAGGCAATAGAGAGACATTGAAAGTTTTTCAACTGGTGAATAACATAATCAAATCTACATTTTATTTTATTTTATATTTTATTTTCTTTTTCATGCCATCCTCCAAGGTACATCAAATCTACATTTTAAAAGAGTAGTTACTGATTTCTGATCCCAGGGAGAATTGGTATGGCCCCTCAGAATCAAGCAGTCACAGTTTTCTCAATTTTAAGAAAAAATAAGGTTATTTTCTCAATTGTTGGTTTTTTGTCTATAAAATTTCTTTAAACATTTGGTGTCTGCTAGCAAGCGCCAGCAATCAATAAGACAATGGAAAGGATGTAAGTTAAAAGTAATAGGCTGGGTCCAGTGGCTCATACCTTTAATCCTGGCACTTTAGGAGGCTGAAGCAGGTGGATTTCTTGAGCTCAGGAGTTCGAGACCAGCCTGGGCAACATGGTGAAACCTCGTCTCTACAGAAAATACAAAAATTAGCCAGGCATGGTGACATGAGCTAGTACTCCCAGCTGCTCTGGAGGCTGAAGTGGGAGGATCACTTGAACCCAGGTGGTGGAGGTTGCAGTGAGCCAAGATTGTGCCACTGCACTCCAGCCTAAGCAAAAGAGTGAGACTCTGTCTCAAAAAAAAAAAGTAATAGAAAAATTGAGAAATTTAAAATTCATTTAAATACATGAGTCCATGAGTTCTGTAGATAATAGTGTGTTCTGCTAGTAAAATGATTTCTAACTCATATGTATAGTGTTTTATGGTGCTATTCAAAGAGAACCATGACTCCCAGGAGCCCATTGTGTGAACATGTTTGAAATGTTTTAAAAGCACACTCTACTGCTACATAGGGAATGGGATTAAATGGGACAACCAGAGGCAATGGCAACAGTAGGTGGCTATTGCAGTGATAGGAGCAGATGATGAGAGCCAGAACCAAGATGGTGGCAATGGGTGGGGAAAAAAGGAGAGAGCCAAAAAATGTTTATGAAGCAAATGAAAGACATTAGTGTCCAGTTGGACATGAATTGTGAAAAAGAAGGAGCTTCAGGAATGAGTCCAGCATTGTCTAGATGGGTAGGTGGCTAGAGGTGCTATTAATAAAAACAGAGGAGAGCAGGGCTGGGTTGATGGGAGAAGGGATGCAGAGCTGTTTTGAATATGTTGAGGTTGACTTGAGAAGGCTGCCGAGCTTCCAAAAGGAGCAGTCCAATTGTCAGTTGGAATGTTCAATACACATGGGTGTATTGCCTGGACACAAGGGTGACCTCATTTATAAAATGACACCACAAATAACGTGAGCTAGCCCAGAAGGAGTGTGGAGAGAGAAGAGAGAACAAGATGAAGCAGAATCCTGGGCAAGATCAAGATTTAAGTGTTAGCCAGGCAAGAGGAACTAGGGAAAGATATTGAGAGAGAATCTTCAAAGAGGGAAAATATCAAGAAACTGCCACGTTATAAGAGCCATAAGTCACATTTCAGTTCAGAGCGGCGATGATCACCTCTGAAGTTCCAGAGAGATAAGCCAGACCATAGCTTCTCAGTGCTGTTGGTTTGATTGATTTTATTAGCTTATTGGTTTGACAATTAAAATAACAAGAGGGATCTGAGGGCAGGGGTTGTGAATTTGGGTGCATGGCAATAAGTGAGATTAACGGGACACCAGTAAGAAGTAGTGGGGACTGTGGCAAACTAAAAAGCATATGTTTACCTAAGAAGGCACCATCATCAACTCTCATGGATTGTTGCCAAGCAGGAACGTGGGCACAGTGATCAGAACATCTGACTTTTCAAGAAAAGTCAGAGATCTGGATTTCTATATGAAATCTTACAATTCTTTATCTTAGCAATACTTTCAAAAAATTTCATACTCTGCGAGGCCTGAATTAAACACACCTTTGAACTGTCAGTTTGAAACCTCTGCCTTTGTCAATGTCCTTAGCGTGGTGGGGGCTGAGCCAGTGGCAGCAGGCCGGGAACTGATTGGGCAAGGAGGAGATGGAGACCATGAGCACAGACCACTACTTTAGGAAGTATGGGTAAAAGAAAGAAGAAGGCAAGCAGGAGAGCTAAGGAGACAGGCAGGGTCAGGGAACCTGTCTTGGGTAGGAAGAGCTGTTTCTAGGCTGAGAGAAAGAGGGTGGAGAGAGGGAAGTTGAAGATCCAGGTGAAGAAAGACTAGCTGATGAAATAAGGATCTGAAAGAGTTGAGGGGATGGAAGAAAGGATGTTGATGGATTTCATGCCTGGAGGCCTTTATTCTCTTGGTGAAGTGGGGTAGGAGTTGAATCAAGAAGCTTGAAGAGAGGAGCAAAGGTTAGGGACAGCCTTGAGGGACACAGTGAGGGCGCTGACAAGGATGCATGGAAGGATGCCGCACTTGAGACTTGCTGAGGGGAAACCCTTACAGTGGGGCTCATGGGCCTGGATGTGGGTGTTGGTGGTGAGGGGCTAAGCAGCTGTTACCTTCCAAGCCCTGTGTCAGGCATTTCATTCTCTTACCTGTTGTATTCCTCCCAGCAGTCCTGCTCACTCAACTGAGTTCGCTTGTGAATAAGTGGCAGCCCCGAGACTCACACCCTTGTCTAGCTGGATTGGGATTCTATTTGATTCCACCACACTACCACTCCGTGCTGCCATCCCCACCCCAGCCATCCCCCAGCCCAAGCCCTCAGACACACCTGCAGAGGAGACTGGGCCAGTGAATTCTTGTTTGGGCATTGCCTGGCTGGTTTGATTGGGAAGTCAAGGGGAAAGAATGGAGGATGTGATGAAGAAAAGAGTAGAGGTCCATGAAGAAATAAGTGAGGACAGAAGGGAATGATGAACTGAGGAAACAGGCTGGAGGAAGGGAAGACCTGATGAGGCCCAGGAGACAGTGAACGAGAGATTGCGTCGGGGCAGGGCAGTGGGGTTCCTGAAAATTTCAATATGAGTGTGAAGATGAGGGGAAGGGAGGTGAGGTAATGATGACTCCAGGGTGTCTAGCCTGTGCAGTGGGGTGGGCAGGGATGCCTTTAGTCATGGCATTGGTCACCACTTTGACATCATGCCATCTCTCTGTCCCTTGCTCACGTGCTGAACCACACTCACCAGCACGTTTCCACCACAGGGTGTCTGGAACATGCAGAGCACTCTTCCTCCAGATCTGCAGAGTGGCTCGTTCTCATTTTTCAAGTCACAGCTCCAGTGTCCCCTCCTCAGAGAGTCCTTTTGTGACCATGCTATCTACTGTAGCTCCCCTGGTCATTTTGTTTATTTTAGACAACTTATGATTGAAATGGTCATTTATGGATTTGTTGACTTGTTTATTCTCTGTCTCTATCACTAGAGGACATGCTCAAGAGAGCAAGGACACATAGGTCTTCTTCATAGCTTTATTTGGCACATAGTAGGTATTCACTGGAGAGAGAGAGAGATGAAGAAAAGTAAGGAAGGAAGGAAAAGAAAGAAAAAGAGAGAAAGAACACAGGTGAAGTGTGTTTGGGAGAGGAATGTCGAGTTTTGAGGTGCCTGGGAGACACCCAGGAAGTGACTTCCAATGGGCAGCTGGAAAGCAGGCTGGGGCCTCAGGAAATGGACTGCCATCTTGCCCAGGAAGAAAGTGGGCCCACATGGTACAAGGGTGTGCAAGCTGTCCTTTTGCATGGCTGACTGCCTTTTCAAGACCAGTGTTGGAGGATGGCTTGCTTGGGGCCCGGTGGGAAGAAGAACCCCCTCGGGTGGTAAGCTGAAGTTGGGTCAGAGTGCTTCTCACTTCTCTCTTCAGTTCTGGTTCTTGCTACTGCCCTGGCTTCGACCATTTCCCATCATTCTTCACTGCCAGCTGCAAGACCCTGGATCTGAATGCAGACTAAATCTTTTCATCTCTTTTATCTTAAAGAGTATCTCGCCCACCTCTGATTCATGGTTACAGGAGGCCAGCATCACCCAGGAGCTGGACTTAGTTTTACAGAATTAGAAAATACTTTTCCCTTGTGCTTGCCTCCTACTCCATTTCTGTTGGCCTTGTGGTCCTCCTGCCTTCCATGGGACACTCAGCAGACCTGCTGCCCCTCTTTTGCAG
Seq C2 exon
GGTCCCCAGCTGCTGAGCAGCTCCAGGACATCCTGGGGGAGGAAGATGAGGCTCCCAACCCCACCCTCTTTACAGAGATGGATACTCTGCAGCATGACGGAGACCAGATGGAGTGGAAGGAGTCAGCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000188687-SLC4A5:NM_021196:2
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=1.000 A=NA C2=0.814
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)