HsaINT0180189 @ hg38
Intron Retention
Gene
ENSG00000127831 | VIL1
Description
villin 1 [Source:HGNC Symbol;Acc:HGNC:12690]
Coordinates
chr2:218440722-218453295:+
Coord C1 exon
chr2:218440722-218440862
Coord A exon
chr2:218440863-218449222
Coord C2 exon
chr2:218449223-218453295
Length
8360 bp
Sequences
Splice sites
5' ss Seq
GAGGTAGGT
5' ss Score
9.65
3' ss Seq
TGGTCCCTCTCTTCTTCTAGGAA
3' ss Score
11.83
Exon sequences
Seq C1 exon
GAGGTCACAAGCCCCAAAGTGGACGTGTTCAATGCTAACAGCAACCTCAGTTCTGGGCCTCTGCCCATCTTCCCCCTGGAGCAGCTAGTGAACAAGCCTGTAGAGGAGCTCCCCGAGGGTGTGGACCCCAGCAGGAAGGAG
Seq A exon
GTAGGTCAGATTCTCAAAGGAAGACAAAGAAGTCCATTTGTTGGACCACCATAGTTGACTCCCAGATTTGGCCCTGCAGGTGACTAGGTGCTGGGGATGAACAAGACAGATGGGATCCTGCCTTCATGCCACCTTATATCCCAGGAGGAGAGAGATCAGAGAAGCCTGGTTACACTATTATTTAATTTCAGGGTTAAGTGCCAGAAAGGTGAAGTACAGGAGCTGTGAAGAGTATTACAAACAGGGCCGGGTGCAGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGTGGATCACCTGAGGTCAGGAGTTTGAGACCAGCCTGACCAATATGGGGAAACCCCATCTCTACTAAAACTACAAAAATTAGCCAGGTGTGGTGGTGTATGCCTGTAATCCCAGCTACTCGGGAGGCTGAGCCATGAGAATTGCTTGAACCCGGGAGGTGGAGGTTGCAGTGAGTCAAGATCATGCCACTGCACTCCACCCTGGGTGACAGAGTGAGACTGTCTCAAAAAAAGAAAAAAAAAAAAGGTATTACAAAGAGGAGCCTGATTTAGAGATTTCTTTCTGAAAGACAAATAGGAATTATTGAGGCAAAGTAAGTTAGTTCTGGAGAAGGGACAGCTAACATGAAGCCCAAAGGCAAGGAATAAAAATGGGGGCAAAACTGCAAGAGGGCCAGAGTGGCTGTGGTGGTGTGCAGAGCCAGGGAGGGAGGCAGGGCTGAACTGGCAGTGCCTTCTACCCCAAGTTAAGGATCGTATCATGTATCCTGGTGGTGAAGGGGAGTATCATTATGGTTGAAGTAGCAGAGTGACAGACTTACATTGGCCTGGCACGGTGGCTCATGCCTGTAATCCCAGCACTTTGAGAGGCCGAGGAATGCGGATCACCTGAGGTCAGGTGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCATCTCTACTAAAATTACAAAAATAGCCGGGCATGGTGGCTTGTGCCTATAATCCCAGCTACTCGGGATGCTGAGGCAGGAGAATCACTTGAACCCAGGAGGTGGAGGTTGCAGTGAGCCGAGATTTCACCATTGCACTCCAGCCTGGGCGACAAGAGTGTAACTCCATCTCAAAATGATAATAATAATAATAATTATAGCTTCTCATCGAACAATAGCCTGGAAGGTGGCAAGAGCAGCCATAGGAACACCAGTTAGGAGAGACAGCACAGCTGCTCTCAGGCCGACAGGTAGGTGGGAACCTAGAACAAGTCATGGTGGAGGAGGTGGAGAGAAACATTTAGGAGGTAAAATCAATGATATTTGGTAATTACTGGATAAAGAGTATGAGAGAAGAGAAAATAGCATCATTCTCCAAGATAGAAAACTGGATCAGGCTGAGCTTAGGGGAAGACAATCATGAGTTTGGTGGTAGCTATGTCCTTTGAGGTTTAGATACATGTTCAGTGGGCAAGCAATTCAGAGGAACACCAGGGCAGAGATATGAATTTAAGACTCATCAGCACATGGTCCATCTGGTAACTGGGGTTAGCACAGCAAGAAGAGCTTGTTCAAAACACTTTTTGTGTATGTGTGGGGAATGGAGTTTGGGGCTGGACACTTTTTTTTAAATTTTAGATAAGATCTCACTCTGTTGCCCAGGCTGGAGTGCTGTTGCAATCATGGCTTACTACAGCCTCAACTTTCTGGGCTCAAGTGATCCTCCCACCTCAGCCTCCCAAAGTGTTGGAATTACAGCGACTGCACCCAGCCTAAGAACACATTTCTAATATTCAATCCCACTTCATGAAGATCCAAAATAGGCTGCCAATCTAGCTTAGGGGTATTGAGAGGAGAGATAATATACTCTGTATAATAAGTCATAAAGTAGTCTTACAAATGAATCAAGGGATCTACAGAAGAGAGATACCTAGTTTCTCTCTCAGAACATCAAAGTCTGTTAAGGGTTTCGGCTCAATATTTATATAAGTGTTTTGTTCTCAGAGAATTTCAATTCTGCCTTTTACCTTAGAGAGCACATTCCTGTGTTCTCTCCTGGATTCTCCCACCTGTGAGGTTGCTGGGAGGCTAGGAGGCACATGGGTCCTCACTGTAACATTGGGATGATCCCTGTATGATGACAAGCTAAGCCCAGCCCTTGGTACATAGTACTCTACAAATGAAAGCTGTTATTATTGCCTGTTCTACACCTGAGAAAACTGAAGTCCAGAGAGATGAAGTGACTTGCCTAACATTACTAGTTAGTTGCAAAGCCAGAGCAAGAACCAGGCCTTCAGAGTCCCACTGTTACCATCATGCCATGCAGCATAAAGGAGGTATTTCTTTCTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGACTCCAAGTAGCTAGGATTACATCCGCACACCACCACGCCTGTCTAATTTTAGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGCTGGTCTCAAACTCCTGACCTTAGGTGATCTGCCCACCTTGCCCTCCCAAAGTGCTATTACAAGCATGAGCCACCACGCCCGGCCAATAATGGAGGTGTTTCTAAAGGAGGACAGCCAATGTTATTGAACCAGAGGATTGATGGAAGGCAGAAATGGATTGCTAATTTTAAATAGACAGACTCAAGACAGCCCCATTATGGTAGAAGCAGTCAAAGAAGGCTTAGATTCTTTTGTAAAAATCAGTTTTCTGTGGTTTTTTTTTGAGACAGAGCCTCTTTCTGTTGCCCAGGCTGAAGTGAAGTGGCACAAGCTTGGCTCACTGCAACCTCCGCCTCCCGAGTTCAAGCAATTCTGCTGTCTCAGCCTCCTTAGTAGCTGGGACTACAGGCGCACACCATCACGCCTGGCTAATTTTTGTATTTTTAGTAGAGATACGGTTTCACCATATTGGCCAGGCTGGTGTCCAACTCCTGACTTCAGGTGATCGACCTGCCTCTGCCTCCCGAAGTGCTGGGATTACAGGCATAAGACGCTGCGCCTAGCCTGTGGCTGATTTTTTTGTTTTGTTTTTTGAGATGGGGTTTCACTCTTGTTGCCCAGGATGGAGTGCAATGGTACAATCTCGGCTCACTGCAACCTCCACCTCCCTGGTTCAAGCAATTCTCCTGCCTCAACCTCCCAAGTAGCTGGGATTACAGGCGTGCGCCACCATACCCGGCTAATTTGTTTTTGTATTTTTAGTTGAGACAGGGTTTCACCAGATTGGTCAGGTTGGTCTCAAACTCCTGACCTCAGGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACCACACCTGGACTGAAGCTGATTTTTTTTCTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAAGCTGGAGTGCAGTGGCACGATCTCGGTTCACTGCAAGCTCTGCCTCCTGGGTTCACGCCATTCTCCTTCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCCCGCCATCACGCCCGGCTAATTTTAGTATTTTTAGTAGAGACGGGGTTTCACTGTGTTAGCCAGGATGGTCTCGATCTCCCGACCTTGTGATCTGCCCGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGCCCGGCCGGCCTGTAGCTGATTTTTTAATCATGGAAGTAGTATACATTCTTGTGGGAGAGCTGAGTTCAGTGTCATGTGGGAGTGTAGGAGAGGTTTTCAGATCTCTCTGTCTGCTCCAATCTTGCAAGGTGAGCCAGTGACAACAGTGGGGTGGTGGGTCTGGCTGCAGGCAGAGCAAGATAGTAATCTAAGTATTTGTGCACTGATGAGTAAACAACAGGGAGGCGGATGTAGGCATGGGTGAGGCTGGTAATCAGCTGGCAGGACTGCAGAGTTCAAGAACAGGACCAATGGAAAGATACAAGTCCACTAGGATGGGTAGTCCCTGCTATCTAGCCTGAGGGGTCAGAGTCCAGCAGTCTTGACAAAGCGGAAGAGCCAGCCTGGCTGGACCAGAGAGAGCAAAGACCTAGGACATAGCAGCCACAGCTGTGAGGAACCTGGGGGGAGGGTGCTACAAACAGATTTGGGGTATGGCAGCTTCTCCCCATCCACTGATCCCCAAATCATTTATATTTACTCTCTTCTTCCAAAACCAAGTACTCAGCCGAGTGCGGTGGCTCATGCCTGTAATCCCAGGCACTTTGGGAGGCCAAGGCGGGCAGATTGCTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACAAAGTGAGACCCTGTCTCTACAAAAAATACAAAAATTAGCCCGGTGTGGTGGCGTGCACCTGTAGTCCCAGCTACCTGGGAGGGTGAGGTGGGAGGACTGCTTGAGCCCAGGAGATTGGGGCTGCAGGTGATCTGTGATTGTGTCACCACACTCCAGCCTGGGTGACAGAGCAGGAGGACCCTGTCTCAACCTCCCCGCCAAAACAAAAAGAACCCCCAAACCAAAACCAAACACTTCACTACCCTGCCTCAGGGAGTGGGGAAGGCTTCCAGGAACCTTAAGGAGAGAATGCCCAGGGTGGGAGGCAAATCTATTGACAAGTTAGAGACTGGAGCATCAGACCCCCCTGAGGTTGAAATCCATCTATAGGTGTTTACTAAGAAGCTGTTTAATTCAGGGCTCTCTGTGGGAGTCAATAAAATGTTCCCTAGGGCAACTCCACCTTAGCAGAGCAGCCTAAGTATTAAAGGAAACCCACAGGTCTCACCTCTACCCTGTCTACCTCTTGGTGCTTAGAGGAGCAGAGATGAAGGCAGGGAGATGATGTTTTATAGCAACTTTAATTAGGGACTCTTAACTGAGTGTGCCTTGAGGGTATTTAGCTTGCCTTAAACAGTATCATTATCATCTTAGTGCTGGGAACAAAGGTCATTTCAGTGAATTCCTTCATCTTATGGCTGAAGACACCCAAGGCTTAGAAAGGTAGTGACTCCAGTTGTGATTTCTTAGCCAAGAGTAAAAAGGTAAAATTGTGCTATCTAATCTTCTGGATCATTCACAGGATGACAGAAGCTGGTACAAGTTGTTTATACAAATATTTTTTGACTCAAAAAGCTAGGCAAAATTTAGTTCTGAATTTGATCTTTGGCCTTCCTAGTGTCTTCTTTTGGAATCCTTCCCCCGACCTCAGTTGTACCTTCTGCCGCTACCCTCCCGCTCTAAGCAAAACCTGCTCCTACAAAATAATCTGACACATTCACAGAAGAATATAAAAAACTGATGAGGATTAACAAGTTGTCTTTTCTTTTCTTTTTTTGAGACAGAGTCTCACTCTGTTGCCCAAGCTGGAGTGCAGTGCCATCATCTTGGCTCACTGCAGCCTCCGCCTCCCAGGTTCAAGCTATTCTCCTGCCTCAGGCTCCCGAGTAGCTGAGAATACAGGTTCCCACCATCATGCCTGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCATGACCTCAGGTGATCCACCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGTATGAGCCACTACGCCTGGCCAACAAGTTGCCTTTTAACTGGGAACCAAACCTGTAAGCCAAGAGTGATGAAGCTATCCATAATGGTAAAACTGTGGCCAACTGCAAGTGTTAATAGTTTACCTTGCAGGTCTGGGAGTTGAAAGCTGACAAGAGGGCTTTATAGTATACCTGAAACTCAAGGAATACTCAAGGAAGAAAGTCAGTATGGTGCAGTGGAACATATGTTGTAATCAAGTGACCTTGACTTTTTTTTTTTTTTTTTTTTTGAGACAGAGTCCCGCTCTGTTGCCCAGGCTGGAGGTGCAGTGGTGCGATCTCGCTCACTGCAATCTCCGCCTCCCAAGTTGAAGCAATTCTCCTGCCTCAGCCTCCGGAGTAGCTGGGATTACAGGCGCCTGCCACCACACCAAGCTAATTTTTGTGTTTTTAGTGGAGACAGGGTTTCACCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACTCGCCTTGGCCTCCCAAAGTGTTGGGATTACAGGTGTGAGCCAACGCGCCCGGCCTGACTTTCTTAAACTTTAGCTGCATCATGTGAAAATGAGAACATTCAAATCCGCCTCAGTTCCTTTCTAAGTGCCACAGCAGTATATGGAAATTAGATTCCTGCTTTGCTCCATCCATTAGGGCTGGATTGGGCCCTACTTCCCTTGCAGGCAGTCTGTTAACTTGAGCCAAAGCAAAGTAGGGCCCAGGAGGGAGACTTCTCCTGAGGGTGACAGGCTTTTGCTAGAAGAGTTGTATGTCCTGTGACAGCAATAAAATCTTTTTTTTGAGACAGGGTCTTTCTTGTTCTCTCACTCAGGCTGGAGTACAATGGCACTATCTTGGCTTACTGCAACCTCTGCCACCTGGGCTCAAGTGATCCTGCCACCTCAGCCTCCTCAGTAACTGGGACTATAGGCGTGCACCACCATGCCTGGCTAACTTTTGTATTTTTTTGGTAGAGATGGGGTTTCACCATGTTGCCCAGGCTGGTCTTGAACTCCTGAACTCAAGCAATCTGCCTGACTTGGCCTCCCAAAATACTGGAATTACAGACGTGAGCCACCACACCTGGCCCTAATAAAATCTCATTTACCCAGACTTGAGCAGATACCCTTATAGGGCTCATCTGCTTACTTTGTGGGCAGCTTGGATTCACTGTTTAAGTGGAGGTAAATGAACAACATACTTTGTTTTGTTTTTTTTTTGAGATGGAAAACTGTTGCCCAGGTTGGAGTACAGTGGCACAATCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGCGTGTGCCACCATACCTGCCTAATTTGTTTTCAGTATACTTTCATATGTAGTATTATTTTCATTTTCATAAAAGCAAGTGAAAATTTGCCTTTAAGAAATGTTTCTGGCTGGGGGTGGTGGCTCATGCTTATAATCCCAGCACTTTGGGAGGCCAAGACGGGTGGACTGTTTGAGCTCAGGGGTTCCAGACCTGCCTGGGCAACATGGTGAAACTTGATCTCTACAAAAAATACAAAAATTAGCCAGGTGTGGTGGTGCATGCCTGTGGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATTGCTTGAGTCCAGGAGGTTGAGGCTGGAGTGAGCTGAGATTGTGCCACTGCACTCCAGCCTGTGTGACAGAGCAAGACCGTTTCAAAAAACAAAACAACAAAAAACAATGGCCAGGCATGGTGGCTCATGCCTGTAATCCCAGCATTTTGGGAGGTCAAGGCGGGCAGATCACTTGAGGCCAGGAGTTCGAGACCAGCCTGGCCAACAAGGCAAAACCTCATCTCTACTAAAAATACAAAAATTAGCTGGGCATGGTGCCAGGTGCCTGTAGTCCTAGCTACTCAGGAGGCTGAGGCAGAGTTATTTGAATCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATCGTGCGCCACTGCTCTCCAGCCTGGGGAACACAGTAAGACACTGTCTTAAAAAAAAAAAAAAGTTCCCCATTTAATAGAGAGGAAACTAAGGCTTGGAAAGAGGAGTCCTAATTCTTATTTGGGCTAATGTGAACTTGACCCTTGTACAAAGAAAATCTCAATCTACCACACTACTATCTTTTTCATTGTTAAAAATTCAGGGATCAGGCCAGGTGTGCTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCAAGTAGGGTGGATCACTTGAGGTCAGGAGTTCGAGACTAGCCTGGCCAACATGGTAAAATCCCGTCTCTACTAAAAACACAAAAGTTACCAGGGCATGGTGGCGCATGCCTCTAATCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAAACCAGGAGGCGGAGGTTGCAGTGAATTGAGTTCATGCCACTACACTCCAGCCTGGGCAACAGAACAAGACATGGTCTGGAAAAAAAAAAAAATCAGGGATAAACCTCTGGAATACCAAAATACCATACTCTCCTCCTCTCCATCCCTTTCCTGGCTCTCCTGACACTGCTTCTGTTTACTCTTCATTTATTTGATTATATACCACATCTATGACTCATCAGAGCAAACGGTGCCTGAGGGTGAGGGAGGAAGGAAGGATATGTGACCTTTGCCCTCTGGTCCCTCTCTTCTTCTAG
Seq C2 exon
GAACACCTGTCCATTGAAGATTTCACTCAGGCCTTTGGGATGACTCCAGCTGCCTTCTCTGCTCTGCCTCGATGGAAGCAACAAAACCTCAAGAAAGAAAAAGGACTATTTTGAGAAGAGTAGCTGTGGTTGTAAAGCAGTACCCTACCCTGATTGTAGGGTCTCATTTTCTCACCGATATTAGTCCTACACCAATTGAAGTGAAATTTTGCAGATGTGCCTATGAGCACAAACTTCTGTGGCAAATGCCAGTTTTGTTTAATAATGTACCTATTCCTTCAGAAAGATGATACCCCAAAAGGAGCCTATGGTCCTCATTTCAACTTCTAAGGTCGCTAGATTGTTTCTATCCTGAGGTATTGCATCAATTTTAATACTCCTATAGTTTTCTCTTCTTAGAAGAGCACAAACACTCCATGGAACATTAGAGTTCTGAGGCACTACCCTAGCTTGTCCTCTATCATGACTCATTTTTATCTATGGCAGGTAGGCTGAAGCACTTTGCAGGTTTACATCTTCCCCAGAGTAACAGCTTTTCCTTTTCACATATACTTTCCTTACTGCCTTACTCAGTGGGTAAGTTAAAGGGCTGAAGGAGAGTTGAATGGTCCACAAGACTACCCTCTTAAGAGGTTTCACAAATTCCAAACAGTACCAGTGAGAGCAGCACTTCCACTGGGGCTAGGCTTGAGACCTAAAGGCAAGTATGAAATGCATATGCTACTTCACTCCCTCTCCCAACCCTTAATAATGAGGCAAAGCAAGAGCCTAGTGAAGGCCAATGCTAGGTTTACAAACTTACCCAGAAGCCTCTGCAAAGCTTCACAGGCTCCTCAGATGAAAATAACAGGAATCAATGGGGACTACGGCCAGACACTGGTTTGCCATTCTGTTCCTTTTAAGAAGTAACAGTGCTGCAAGGAAGTCCATGTCAGAAAGCCAACAGAAGGTGATTTCCACAACTTTGAACAGGTTGTTACAAGTATCAGCAAGAATGTGTCCTTTTCAGAAATAACAGTCAAATCAAAGAAGGTTAATAAAGGCTTTAATTTCATACACACAAAAAAACTCTATGCATAATTTAAAAAGGAAACAAAAACAAAGAAAAACCGTAAAGGATACAGAGGAACAGTTCTGCTAAAACACAGATAAAAGTGCCGCTCCATACAAAACATAAAGAATCAGAATCAAAAGTCACTCTGAACATAAAGAAAAAAAATCATCTCACAAATAATGTGGCCACAGCTGCCAGAAAACCTGGTAGTGGCTCAATTAGGCAAAGTGTAGGAATCTCATTTTTGTTTTTCTCTCCTTAAGTTTAAAGAAACAACAATGACAATAGGCCAGAGAAGTTAGGGAGGGAAAGAAAAGCTCAAAGGGAGGGAAACCTGGGGACAAGAGGTGTGCACACCCACATGTGGTCTCACTCTTCACACAGGCCCACTATTTTTGAAGTAGACCAGTTTAGTTGACTGTTCTTCTTTGTTCTGGCATCTGACTGGACCAACCTGGAACCTGGTCCAGACCCTCACCCACTCTATTCTTATGCCAATGGACATACCTATACTTTGAACCTCTGTACTTTTAAGAAAAGTCCAATGTTACAAAATCAAATGCTTATATTCAGACTGGCACACTTTTTAAATAAAAACTCCATACACCTCAGACATATAGCACACATGGAGACAACTTACTAATTGTGTGTAAGTATGATACAATGAATGAGACTGCCTGAAGTCTAGTAATCAAAGCATGCCATAAGGTGAATGATTGTGGTTAAACACAGCAAAATAATTGTCACAAAACTTTCAAGGCCTAACAAATTAGAATTTTCCAATAAAAAATATATATTTTTTCAGATGTTAATAAGACATATCAGTAGAGACAAAATTAGGATTTTGAAGTAATGCAATAAAAAGATGTTGGAGGGCAGAAGTCTATTTAGTTTTTGTATACACTTGCAAGAGTGCATTACTCAGTATAAAGCAAAATGGGGAGGAAAAAGACATCCATCCATTTTATTGGAACACTTTTATGTGACTTGAATCTGGTGTTAGGTTGTTGATTTTTCTAAAAATCTCCTATATATACAAAATCCATATGTACTTGGAGATCCAGCTGTTGCCCCCTGTTTAAAACAAAAGACCACCTCGGGGGGTCAATTAAATTAAAAAGGCCCTCCAACCACCCTAAATGGGATAACTAAGAGTATCTACTGCAGTCATTTCAGAGGACAGAGAAGGAAAATATTTTAATTTGCTTTAATATAACCTCTTTTCAGTAGATCACAAATGAGTTTACAAACTACTTTTTTTTCTCTTTAATTTAGGTGTTTGCAGATAATTTTCATTATATCCGTAGCTGTATGTGTGTATAGTTACATAATGGTAACTACACACGATACAGAAGAATCAGTAAATTCATGGATTATTTTGCTGAGGTTTTAAATTTTAAAGCCTCTGTTTCAGAATTTTATACTTGATCAAGGAGAAAAATAAATGTGTAGTCTAACATTTGCTTTCTGGAGTTAATTAACTGATCTGTAAGAACCACTGCATATGTCTTAAAATGTAAACATATTTACATTTGTTGTATTTGTTATTGAGCCTTTAAGGTTAGGCCCAGAATGAACAGACCATAGCAAGTAAACAAATAATTTTTAGAATCAAAGTATTAATAGAAGACCAGTTCATGGATTTGCTTATTCTATCCTGCTGAGACAAAACTCATGAGTGTGCACACACATGTGAATATATCCCTACGAAACAGTCTATCTTCTCATAGGCTTAAATTATAGTCATGGCTATTAAAGAAATTAACAGCATCCAGCCACATGCAACTTTCCAACCTTCAGTACTATTAGGTGATTAAAATCAACAAATATGAAGTTTAGTTCATTTTTCCCTTAAAATTCCAACAAAGATCAAAAGGTTGTATCTAGAACTAATTGCCATCAAGTTCCAATTCAATGTCATTTAAAGTAATGTAACCACACATTTGGTATTTTCAATAGGAAGGTTAATTAGGTATTGTGCAAACTGCCTGCAACGGAAGCACTCAGTCCTTATCTAACTTGTCCCTTCCTGGCCCCAACATGCTAACTGCCCCATCCCCAATTCTGGGCAAACTGATCACAATGTGCAAAAAATAATATATTATCTATTTATAATTTTAAAATATATACAGCCAGCTCAAAAACAACAACAAACCCCATCAACATAGTCCAGCTGAAATCTCCACTGGTAGTCAAAGAAGTAGATTAAAGGAGTAAAGGAAGGAGAAGGCTGATAGGGCCACAAGAATGGACAGACATCAAGTAAAATTTGAGTCCCAAACATGCAAGTACATGAGCAGTGAGATAACTTATATATTCCAATAACCTATTTTCAACAACTCCTGCCCAAGACATGAAGATCAAATCAGGTTTCTGAGGTAAGTGTACTTCTAAACCATACACACATGAAAGCTATGAAAGCAATTCAAATGAGGCTGCTTCATGAGGCAATCTAGACTTATGGCATTATTTCTACTTTTCTCCATGTTTTAATTGCAGCCTGCACTTTAAATCTTTCCCAATAATTTTTAACAGTGCCTCTCAAATGCAAAGACACGTAAAAGAATTAATAACTAGCCAAAGAATTTTATCACCGCTTCACTCATTTATAAGAAAACCAATTATTTCCAAGCAAAATCAAACCAAACCAAAGAGGCTCCTGGTAGAAATGAAACAAAACTTTAAAGCTAGTTTTAAAACAAATATTTTCCTCTGCTCTAAACTACTCTGGCGTTTTCTACCACTCTACCATTTTGGAACATTCATTACAATAAGGTATATAGGTAGATGGTAGGAGGCAAAGCATTTATCAGTAGTTGAGCAAAACTGCTGAGGCCATTTATAATTCAAAGAATGAAAACTTAGAATAGTTTACTACATTAGAATACATCCAAGTTCCAAGAGTAGGACTGGAGCTCTCTTAAGGCAATCTTTCAGAAAAGATGTTGCATCTTCTGTGATGATGGTTTGTGTTTTTTTTGTTTTTGTTTTCGTTTTTTTTAATGAGATGGAGTCTCAC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000127831:ENST00000248444:19
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.319 A=NA C2=0.027
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0220914=VHP=WD(100=94.7)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains