HsaINT1000100 @ hg38
Intron Retention
Gene
ENSG00000167972 | ABCA3
Description
ATP binding cassette subfamily A member 3 [Source:HGNC Symbol;Acc:HGNC:33]
Coordinates
chr16:2329648-2340735:-
Coord C1 exon
chr16:2340573-2340735
Coord A exon
chr16:2329855-2340572
Coord C2 exon
chr16:2329648-2329854
Length
10718 bp
Sequences
Splice sites
5' ss Seq
TCGGTGAGT
5' ss Score
11.11
3' ss Seq
CACCTTCCATCTGTCCAAAGGTG
3' ss Score
10.31
Exon sequences
Seq C1 exon
GTCCGCCAGTAGCGGGTTGCAGGCGCACCCTCCCCTCCAGGGCGGCCACGCAGCTGTCAGTGCCGCCGCCACTGCGAGGCTGGAGCGGAGCCCGGGTGGCCGAGGGAGGGGACCCCGCGAGAGGGCCGCGCGCCGGCCGCCGCCGCCCCGGCGCCCAGGCTCG
Seq A exon
GTGAGTGCCGCCGGGACCCGCCGCTCGCGCGCTCGTTCCCGGGGCTTGCGGTCCCCACCCGGGTCCGCCCTTCCCACCCTCGCCGGCCAGCTCGGGCCTCGGGCCCCCCCCAGCTCCGGCCTGGCCTGCGGGCCCCTCCCGCGACCCCGCATCCCCTCCGGCCGCGCCCGCGCCCGCCCCTCCTGCCGCGGCCTCGGCTCCGGGCGCTCCCTGCAGGTGCCGCTCCCTCAGCGTCGGCTCCCATCCGAGCCTTGGGCGTGTCCCGCACTGCGGGCAGTGCCTGAGCCCGCGCCGCGCGGGGAAGCTCGACCCTGCGGAGACTCGGCACGGCCCGGGCCCTCTGTGTGCGCCCAGAAGGTGGATATGTAGCGACCGACAGCCCCGGCCCCGAGGGATGCAGGCGTCCGCCGCGCACTTGCGGAGATGGCGCCGCTTTCCGGCCGCAGGGATGCCGGGCGCGCGGTGGCAAAGCCGCCCGGGTTGGATTCCGCCTGCTCCCACCCTCTGGTTCCGAGGAGCCTCCAAATCCGAATCCAAGGCCCACGGTCCGCGGCGGGCGTTTGCTGCGCCCTCCACTGTGTGGGAACGGGAAAGGGGAGCCGCTAGTCCAGGCGGAGGGGCTTGTGGCAGTCGCCGGAGGCCGCGTTCTCGGCGCCCTCGGTCAGGACGCCTGTGTGCATCGCGTCCGTGTGTCTTGGCTCTGTTCCAAGCCGGCTCCACGCTTCAGAAGGGCCGGGACGGCCTTATGGTCAGGGGCGTGGGGAAGGCGCTTGGTGTCTGTCGCACAGATGAAGCCATGTCCTCAGGGGGTAATTGCCGCTTGTTCTCCGGGTTACGTCCTGGACTGTGCACTCCGGGAAGGCGTCGATTGGATCTTGTTGGGGTTTGTGTTCCTGGAACTCCAGAAATGCCCGCTGAGTGAGTAGCCGAGACCCCGCGACAGCATGGAGCCCAGGCAGGGAGCACGTGGGAGAGGTTCACTCTTCTCCTGGGCATCCCGTCATTTTATTCAGATAGTCTGGGCGCTGCCTTTTGTAAACTTGAAAAGACTAAGACTGTTTTAGAAAGTTTGCCTCATGAGAAATGTAAGAGAAAGGGAAAAATAGATAAAAATGGATGTCATGGGAATCTCCCCCACACTTTCATTTTTAACTTCTTAGATAATTTTTCTTTTAAATTGAACCTTTGCTAACTCTACCTGAAAAACAGGACGACGTCTCTCCCTTCCTAAAGTGACTTACCACCATTCTGACCAGACAGGCTTTTGGAACAGGAGAGGGTAGCACGAGTTGTTTCTAAAAAGATGTTAGCCTTCCATCTGCATGAGCCAGGCAGTCTCATGGGAGCCCATTTTGACGTAGTCTCAACTGGGAAGGCCCAGGTAAGATCCCTAGTTTGCCATTTCTTCCCCAGCCCTGCTTCCGGAGACTGTGGAATCTATTGAGGGGAAGCATTCTGGAACTTTGGGGACGGCTCTGACGGGGAAGGCCTTGTGCACAATGGAAAGATGAATTGGAAGCCGGGCTAAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCAGAGGCGGGCGGATCACTTGAGTTCAGGAGTTCGAGACCAGCCTGGCCAACATGGCGAAACCTCATCTTTACCAAAAATATAAAAAATTAGCCGGGCATGGTGGCACGTGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGAAGAATCGCTTGAACATATTAGGTGGAGGTTACAGTGAGCTGAGATGGCACCACTGCCCTCCAGCCTGGGCGACAGAGCAAGACTCTGTCTCAAAAAAAAAAAAAAAAAAAAAGATGAATTGGACACAGTCCCTGCTCTTGGAGGGGTCTTAGGATAGAGCTAAAGAGATGCTTTATTCACAAGTAACTGTGACATAAGACAGAACAAGATGAGTACCACATGACACATCCAGAAAAGGTGCAACAGGTGACCAGAGGTGGAGGAGAGTTGGCTCCAAGAAGAGCAGAGGGTCTCCACCCAGGCTTCCCGTTACAATCACCTGGGAAGCCAGCCTGGGCCCAAAACAGCCCAGAATCTCCAGGGGTGGGCCTCAGATGTCAGTTTCTGTCTTAAAGTGCCCTGGAAAATTCCATTGTGCAGGCAGCCAAGACAAAGAGCCCCTGAAACAAGCTTCACAGAGGCCATGGTACTAGAAGTGGGCTGGGAAGTGATGGGTAGGTAGAGAAAGGTATCCGGGTGATATTCTAGGCAGACAAAACACTGAAGGCCCACATCTTGTGGGGAAGAGTGAGGCATGTCAGGCCCTGTCCTGGGAGAGTTTTGCAGACCCCATTCCCCTGAATGGCTCAGAGTGTTTGTGGTGTTGGAGAGGTTTGGAGTCAACAGGCAGACAGGTGCCTTTGCGGGAGCCGTGTAACGAGGTCCTTGCTAACTTGCTTGTTGGAGAACATCCATGGTTACCTCCCTCTGGGGACTTTCCATTGCCTCATTACCTCGTTTCCTGCACCTAGGGAGGCAGAACAGCTAGCTGGCTGGAGAACGGGACTGAAGCCACGGCAAGGGTTAGGGAAACAGGCAGTAGCAGAGATTTTGTGGAAGTCTGTCCCGATAGCTCCCTTTGGAACCACGTCTCTGGCTTAAAAATACACCCTATGAACCCCTGCCAGAGCTTCATTGTAAACGCAGAGCCTGTGATCCTAGGGAGGCAGCCGCCTCCAACTCCAGGCAGCGCCTGTGGTGCTGAGTATGAGCGCCAGCAAGCTAGGGCTCCATCAGGGCCTGCGATGCCAGTGCCACAGCCTCAAACCAGCCTCCCCAGCTCTCAGCCAATGGCTGTGGGTTGTGCATTTGTTCCTACCTCATCCCCACAAGGGCCACTGAGGTTATAAATTGGCCTTGGCCAGTGCAAGTGATTCACATCTGTAATCTTGGCACTTTGGGAGGCCAAGGCGGGAGGATCACTTGAGGCCACAAGTTGGAAGAACAGCCTGGGCAACATGGCAAGATCCCATCTCTAAAAAAAAAAAAAAAAAAATCAAACAATTAGCCGGGCATGGTGGTGCACACCCATGGTCCCAGCTATTTGGGAGACTGAGGTGGGAGGATCACTTGAGCCAGGAGGTCAAGGCTACAGTGAGCCATGATCACACCACTATCTATACTCCAGCCTAGGCAAAAGAGTGAGACCCTGCATGAAAAAAAAAAAAAGGCCTCAGACTTTTTTTTTCATGTGTACTGTTATGTGTAAAAGAATGAATGTAAACATGCAGCCCAATATATATTATGTGTTATAAATTACAATTACTGTCCTGATGTATTATGGACATAGAAATATATACAAATTTGGATCTTTTAAAGGGACGAAGGCCAGACAGACATGGTGGCTCACACCTGTATACCCAGCACTTTGGGAGGCTGAGATGAGACAATCCCTTAAGGCCAAGAGTTTGAGAACAGTCTGGGCAACATAGTGAGACCCTGTCTCTACTAAAAAAAAAAAAAAAATAGCCAGGTATGGTGGCGTGCACCTGAAGTCCCAGCTACTGTGGAGGCTGAGGAGGGAGGATCGCTTGAGCCTGGGAATTCAAGAATGCAGTGAGCTATAATGATGCCATTGCACTGCAGCCTGGGAAACAGAGCAAGACCCTGTCTCTAACAGAGAAAAAAAAAAAAGGATGAGAGGTGAAATAAACATGATTAAATTTATCCAACATATGAATGCTACAAAAACTATTGTATAAACATGCTTTTTAAAGATGAAAGCCATGTGTCCACATCCCATTTATAAACTCTCATTGAATCCTAAGTCCCAGCATTTAAGATCAATTGTAAGTTCTGTTTATTGGCCAGACGAGGTGGCTCACGCCTGTAATCCTAGCACTTTGGGAGGCCGAGGTGGGTGGATTGCTTGAGGTCAGGAGTTCTAGACCAGCCTGGTCAACATGGTGAAACCCCGTCTCTACAAAAAAAAAAAAAAAAAAAAAAATTAGCTGGGCGTGGTGGCGGGCACCTGTAATTCCAGCTACTCAGGAGGCGGAGGCAGGAGAATCACTTGAACCTGGGAGGCAGAGGTTGCAGTGAGCCGAGATTGCACCTTTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCTGTCTCAAAAAAAAAAAAAAAAGTTCTGTATATTTCAGGCCCTAGTTATTAACAGCATTTACACATTAACATGATACAGAGAAAGGCACAGACCCTGTGCTTACGAGGCAGGGTACTTGTTTTTCAATTTCATTTACCCATCATCTGAGGGCCCTTGATGAATTTGGGCTGGGTATGTTCAGGGGCTATCAGGGTAGGTGGAGATTCTGGTGTTGAAGATGTTTTGGTGTGCGGGTGTAAATGTTCATATAGACAGTACGCTTGTAGCATCATTGGGAACGCAGTCACGTAATTGTGGAAACCTCTTCAAACGTCTGTTTTCACAAATGCTCTATTCTTGGTACAGATTCTTTTTGAAAAGCTGTAACTCTCATATACTGTCACTTTTTCTTTGAAGGGACAGATTACGTTGTGTCTATTTAAAAGAAAAAAGGTAGATGACACACTGCTGCAGTCATTTGTCATTAAAAACGAAAAAATGTCTCCGGATTTGGAACTTTTCACAAAAGAAAATCTGTACCTTCTCCTTAAATTCTCTGACTCTTTGAAATACTAAGCCATGAAATGACCAGTAAACCTCCAAGTCACACAAAAGATACTCATGGTCATTTTCCACATCACTGCGAAGCATTGTAAAGCTTTCGCTATTTAAGGGTCTTGAGTTTTTGTGGTTTGTTTGTTTGTTTTAATTGACCACAACTGGAAAGCTCTGAAACTTGTAAACTCCAACACGCCTAGGATGCTTAAAGTAGACTTGTGGTGAGGGCCCACCATCACTCCCCACATCACAGGGTGCCTCCTCCTCAGTCAGGATGCCACGGCTGCTGACATACAAGCCAGCGTGAACACCAGGGTCTGTCCAAGTATTAAATGTCAGTAAAGCTGGCAGGGTGTGGTATCGCATGCCAGTGGTCCCAGCACTTTGGGAGGCTGAGGCAAGAGGATCATTTGAGCCCAGGAGTTTGAGACCAGCCTGGGCAACATAGTGAGACTCGTCTCTACAAAAAAAAGCCAGGTGTGGTGGTACATGCCTGTAGTCCCAGCTACTTAGGAGGCTGAGGCAGGAGGATCACACCACTGCATTCCAGCCGGGATAACTGTGTGTGACTGAGATCCTGTCCCTACAGGAAACAAACAAACAAACAAACAAATCAGTGAAGCCATTTTTTTCACATTTTTAAAGAAAAATACTTACAAGTAGATTTTTTCATCACTTTTTCACTGCTGCAGGTTGTCTAGCCCACCCCATTTGGAGACCACTGGGAAGGGGTGAGGACCATACTCTATAAATGTGCCTGCTTTTTTTATATATTAATAATATTTAGGGCCGGGCACAGTGGCTTACACCTGTAATCCCAGCACTTTGGGAGGCAGAGGCAGGCAGATCACTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTGAAAATACAAAAATTAGCTGGGCGTGGTGGCGAGTGCCTGTAATCCCAGCCACTCAGGTCGCTGAGGCAGGAGAATCGCTTGAACTCAGGAGGTGGATGTAGCCATGAGCCAAGATCACGCCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCCGTCTCAAAAAAAAAAAAAAAGAACTAATATTTAAGTCTGGCACGGTGGCTCACACCTGTGATCCTAGCACTTCAGGAGGCTGAGGCAGGTGGATCACCTGAGTTCAGGAGTTCAAGACCAGCCTGGCCAACATAGCAAAACTCCATCTCTACTAAAAATACAAAAAATTAGCTGGGTGTGGTGGCGGGCATCTGTACTCCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTACTTGAACCTGGGGGCCGGAGGTTGCATTGAGCCAAGATCGGGCTGCACTCCAGCCTGAGTGATAGAGCGAGATGCCGTCTCAAAAAAAAAAAAAAAAATTACTGGTGTTTGGGCATTTCATCCACAGGATCCATTGAATTAGACATTTTCAAATATTTACTGTGTACCCGTCTCTCAAAAAAGATAATGTCCTAGATAAAGGATTAAACAAAACCAGTCACCCTCACCCAGCATCACTGCCCATTGGGACACACCCCGAGCTCCCTTCTTGGTGCAACATCCAGCGCCTTGATGACATGGGCCCAGGGTCTGCGCCTTTCCTGGCTCATTCTCTGCACTGCCACTCGGAATGACTCGCTGCTCCCCATACACAGTCTGTCTCCAGGATCCTGTAATGTCCTTCCTGTCCCAACTAATGAGTCATTCAAGACCGGCTTCCCATGTCACCTCCCCCCATCACCCTCCCGGGCCATCTCCCTGTCTTGCTCGCTGTCTCACACACGCAATTAATTCCTGTCTTCTCCTGAATCTTGCCATACTTTATTTAGCATCCGTCACAGCAATTACAGTGCATGCAAGTGTTCAGGGACTGTGAACTCCTTGGATTAAGAATGTTATCATCGGCCAGGCGTGGTGGCTCATGCCTGTAATCCCAGCATGCACTTTGGGAGGCTGAGGCGGGTGGATCACAAGGTCAAGAGTTTGAGACCAGCCTGGCCAGCATGGTGAAACCCTGTCTCTACTAAAAATACAAAAAATTGGCAAGGCATGGTGGCGCACGCCTGTAATCCCAGCTACTCAGGAGGCTGAGGCAGCAGAATCGCTTGAACCCAGGAGGCGGAGGTTGCAGTGAGCTGAGATCACACCACTGCAGTCCAGCCTGGGCAACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAGAATGTTATTTTCATTTCCAAATCCTTAGTACCTTGTACAAGTGCCCATCAGACAGCAAAAACTTGGCAATTGTTGAATGAACAAATGCTTTTTTGTCTTGTATACCCTAAAAGACCATGGATTCTACCGGCCTCCATTAATTGACTGTCCTCCGTGCCTCAGTGCGCATACACGCGGATCTTTGATGCTGGCTGGCTGTTGCAGACTCCTGGTGTCAATATTGGGATGTTGGGTCCTCCCCTGAAGGAAAAGCACCAAATGTGACCAGCACCACACCTGTGGCAAAGCGAGCAGAGCCATGGTTGGCGGCTCTCTTTGTGCATCTTGGGGCGGTTCACCTGTGGCTTTATCAAGGCCCCCTTCTTTCCATGAGTGGATTTCTCTATGCCTTTGTGGACAGGCTTTCATGGAGGGAGGTGTAACCAAGCTCAGAATACAACAGGAACACATGGCGTAATGGGTCTTGTGCCCCTCACTCTGGCCTGTCCCTTCTGTTCATGGGTCTCAAGACCCACCACCCCCAGGGACCTCTGCTCCATATATGCAGATATAAAAACTTCTTTTGAAAGGGCTCATAAGGGCCAGGCAGCATGGCTCATACCTATAGTCCCAGTACTTTGGGAGGCCAAGATGGGAAGAAGATTGTTTCAGGCCAGGAGTTTCAGACCAGCTTGGGCAACATAGCAAGACTCCATCTCTGCAAAAAATATAATAAGTAGCCAGGTATGGTGGCATGTGCCTGTGGTCCCAGCTGCTCAGGGGGCTGAGGCAAGACGATCACTTGAGCCCAGGAGCACCAGGCTGCGATGAGCCCTGCTCACGCAACGGCACTCCAACCTGGGTGACAAAGCAAGACTGTGTAAAAAAAAAAAGGGCACATAGGAATTGGGTGGCAAATTCAAGCCTATGGTGCACACAAAAATACCTGCAAACCACAAATAAAGAAATGGAGGAGGCAATCGGTGCGGGTCTTTGGACACAAGAAGACAGCCACAGCTGTGGCACACTGCAAACGCGGCAATGGTCTCATCAAGGTGAACGGGCGGCCCCTGGAGAAGATTGAGCCGCCCACGCTACAGTACAAGCTGCTGGAGCCAGTTTTGCTTCTCAGCAAGGAGCGATTTGCTGGTGTGGACATTCGTGTCCGTGTGGAGGGTGGTGGTCATGTGGCCCAGATTTATGCTACCCGTCAGTCCATCTCCAAAGCCCTGGTGGCCTATTACCAGAAGTATATGGATGAGGCTTCCAAGAAGGAGATCAAAGACATCCTCATCCTGTATGACCGGACCCTGCTGGTAGCTGATCCCCGTCCCTGCGAGTCCAAAAAGTTTAGAAGCCCTGGTGCCTGTGCTCGCTACTAGAAATCCTACCGATAAGCCCATCGTGACTATCAAAATTCACCTGTATAATAAACAGATTTTGAAGGATTTTAAAGTTTCAAGGAAAAAAAAAAAAGAAATGGAGGAGTTTGGGATTTCTCCAATTTGCTGCTGAGCACTGGCCGCCTGAAGAGCCACAGCGCTTGTTAACTGGCACAGCCGATGGCTCTTGAGCTGACAACAGTTACTGGAAAGACCATTTGTAGAAGAATTTGTGCCATCAAGAGAGTTCTGAGAAATGAGCAGCCTGCAGTATGCGCTCACTCTGCACCGAGTCAGTTGCTTACCTAAAAAACAAACATTGAGATACTCAATGATATGTGTGATGTTTAATATTTTAACAGTAAGCAAACCTTTTATAGAGAGGGGAAAAGGTTTGCCTTCCCTTTCCTGACTGTGTCCCGGGACTAGTGAAGAGAGCCTCTTCAAAGGGAAGTTCTTGAAGCTCTGCTCTTGTCCTCTTGCTGGGCAGAGGCGGCAGCTTTAGGAGTGGCTGGAGTCCTGAGTGTTTAACTTAGAGTAGCTGATGGGGGCTCAGCCGGGGCCGGTCCTGGGCCTCAGTCATCAGCACTTCTGGAGACTCTGCCGCCTCGGCGTCAAGTGCAGAAGGAACATTAACTTCTTTCTCTTGTGTACATTTGCTTTTGTAACAAAAAACTTGCCAGATTTTGTAATTCTAGGATCTCTTCCTTTAAACTCCTTTTGCTGAAACAGAACAGATGCAAGCGTAGTGTTCAGTGAGACTTTAGGTAAAGCCTCACACGTATCAGGCAACAAGCTGGGTGCCGTGGGGGCACAGAGATAAAACCTCGGCAGGGCACAGTGGCTCACGCCTGTAATCCCCACACTTTGGGAGGCCGAGGCGGGCGGATCACTTGAGGTCAGGAGTTTGAGACCAGCCTAGCCAACATGGCAAAACTCCGTCTCTATTAAAAATACAAGAATTAGCCGGGCGTGGTGGCATGTGCCTGTAGCTACTTGGGAGGCTGAGATGGGAGGATCACTTGAACCTGGGAGGTGGAGGTTGTTGTGAGCCGAGATCGTGCCCAGCCTCGGCGACAGAGCGAGACTCTGTCTCAGAAAAAAAGAAAAGAAAAGAAAAGAAAACTTCTATTAAGGTGATGGGGCTTAGGGGTCTTTTTTACCTTTCAGTTTCTGATGTTATGTTCTAGGAGTGATATGCAAAACTTGTATGAAGTTGGAAGTTGTTCTGTGTTTTTAGGACCCACAGGTTGTAGTAGTGTAGTAGTTAGAAGACAGACTTGGAAGTTAAAACAAGCCAAGGTTCAAGCCCTGACTTGGCAGCTTCTTGCTGTGTGATTTTGGGCCAGGCATTTCCTCCTTGTTTCTTCGTCTGCAAAAGGGTGATGTTCCAGGTCAGGAGATCGAGACCATCCTGGCTAGCACAGGGAAACCCTGTGTCTACTGAAAAATACAAAAAAAATTAGCCGGGCGCTGTGGTGGGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATGGCGTGAACCTGGGAGGCGGAGTTTGCAGTGAACAGAGATCGCGGCACTGCACTCCAACCTGGGAGACAGAGTAAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAGGGTGGTGTTGCCAGAAGCCAGGAGAGGATGAGGAGGTTGTAGAAGCAGAGTGCTTACAAGCAGGAAAGCAGAGTTTCAGCTGGGTACAGTGGCTCACACCTGTCATCCCAACACTGTGAGAGGCCAAGGTCGGCGGATCACTTGAGGTCAGGAGTTTGAGACCAGCCTGGCCAAAGTGGTGAAACCCCATCTCTACTAAAAATACAAAAGTTAGCTGGATGTGGTGGTGGGTGCTTGTAATCCCAGCTATTTGGGAGGCTGAGGTAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAGTGAGCTGAGATGGCACCACGGCACTCCAGCCTGGGCCACAAGAGTGAAACTCTGTCTCAAAAAAAAAAAAAAAAATAGAGCTTATATTCTTTTTTTTTTTTTTTTTGAGACAGGGTCATCTCGGAGCTGATGACTCTGAGTTAGCACCATCTCGGTTCACTGCAACCTCCACCTCCTGGGTTCAAGCAATCCTCCCACCTCAGCCTCCCGAGTAGCTGGGACAGGCACACGTCACCACACCTGGCTAATTTTTGTGTTTTTAGTAGAGACAGGGTTTTGCCATGTTGGCTGGGTTGGTCTTAAACTCCTGACCTCAGGTGATCCGCCCAGCTCAGTCTTCCAAAGTGCTGGAATTGTTCAGGCATGAGCCACCGTGCCCGGCCAGGTGTTTATTTTCTAAATCCAAAATTTTTTATCAGATCTGCTCAGTTTTAAGTAACATCCTCAAAATCTATTTTGCTCTTCTGTTTTCTAACTTGGTAAGAGGTGTTTTATAATTATTTTCCAAATTACACTCAAACACCTTCCATCTGTCCAAAG
Seq C2 exon
GTGCTGGAGAGTCATGCCTGTGAGCCCTGGGCACCTCCTGATGTCCTGCGAGGTCACGGTGTTCCCAAACCTCAGGGTTGCCCTGCCCCACTCCAGAGGCTCTCAGGCCCCACCCCGGAGCCCTCTGTGCGGAGCCGCCTCCTCCTGGCCAGTTCCCCAGTAGTCCTGAAGGGAGACCTGCTGTGTGGAGCCTCTTCTGGGACCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000167972:ENST00000301732:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=NA
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NA
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Cow
(bosTau6)
No conservation detected
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains