RnoINT0010222 @ rn6
Intron Retention
Gene
ENSRNOG00000050057 | Abca3
Description
ATP binding cassette subfamily A member 3 [Source:RGD Symbol;Acc:1307174]
Coordinates
chr10:13723405-13736564:+
Coord C1 exon
chr10:13723405-13723512
Coord A exon
chr10:13723513-13736454
Coord C2 exon
chr10:13736455-13736564
Length
12942 bp
Sequences
Splice sites
5' ss Seq
TCGGTGAGT
5' ss Score
11.11
3' ss Seq
GTGTTTCCATGGTGCTCCAGTTG
3' ss Score
6.78
Exon sequences
Seq C1 exon
GCTTCGGCCGCAGCGGCCCCTGCGAGGCTGGAGCAGAACCGGGAATCTAAGGGAGGGAACCTGGCGAGAGAGCTGCGCCGACCGCCGCCAGCCTGGCGCTGAGGGTCG
Seq A exon
GTGAGTGTCACTAGGACTTGTCACTCGCGCGCTAGCTCAGGGCTCTGAGATTTCCCGTCCTTGCCCGAGTCTCCACTCTGCCAGCGGGCAGCGCCCCAACCTGGGGCCTCCGAGCCCCTGCCTACCGCCGGGACCTGCTGGCTCCCGGACTATCCCTTCGTGTTGCCTCAGGTGTTGCTGTTGCGGCGTCCTCGGTGCTGGGTGTGTCCCCGCCATAGCGGGTCGCTGAGCGTGCGGGAACTGAACAGACGGCTGGGTCGTGCGGTCTATTGTGCGGGCCCGGCAGGTGGACAGACAGCCGCCGCCCTCAGGCGCTTTGCGGGCTGCGACACAGCAGGCCGGCGGAGTGCTCCCGGCTCAACCAGCCAGTGCTGGTCCTGGTTGGAATTCCTCCCAGTCCTTCGAGCTTCACCATCTTCATTTTCACGAACTTTAGCATGGGGTTCAAGGGGTGATTTGCTAGGGGTTGAAGTTAGCGAAGCCCTCAGTATGTAGGACCGGACTGGGAAGGGGGAACCACCGGTGCTACGGTTCGGCAGCCACTGTGCCCAGGGTCAGGTGTCTTGATGTCGGGTGTTGGGTGCAGATGCTCTGAACGAACTTTGGCCAGGCCCTGGGGGTTAGAACCCGAGCCTGTGTCTAGGGCAGGTGTTCTTGGTGCTTCATGCCTGAGGTTTCCCTGTGTGTGGCCCATTTGAGCCTTGTCTTAAAGGATATCTGTCCCTTTGCCTTCAGGCCTGAATGGTTCTTGTATCATAAATAGGAACTTGGTGTTTGCACATCAGGGGCACGCAATGCTCTCAGAATGAGTGGCTTTGTGGAGACCCAAGCAAGGTTTAAGGAAACGAATTCCACCCTTGTCTCCTAAGCAGCCTTAATTTCGTTCACAAAGTTTTGTTGTTGCCGTTAGTAAGCTTGAAAAGACCGAAACCATTTTAGAAAGCTTACCTCATGGGAAGTGAGAGAGGGGGGTGGGGAGAGGAAAAATTGGTTTAAAAAAAAACCCAAACAAACAAAATAAACGGGTGCCATGGGAGTCCCCCTCACTCACATTGGTTTGAATTGAGCCCTTGCAGACAGATAACATCCTCCTTTTAGGTGGCATCCCACCATGCCGGCAGAACAGCATGACATGGAGCTGGAGTTCTTTTTAACAAGCCACTAACTTTTCATGTTATATTGACCAGGCTGTCACAGAGAAACTATTTTGACTTAGTGTGCACTTAAGACCTTAGTTTGGCCTTTATGGAGTTTATGGTTTCTCCTTCTGCCCTGCTTCTGGGGATTGGCAGGAGATTCCTTTGCTATATTAAGTCTGTCTAGAGCTACATTCTAGAACTCTTAGGCATGTCCGTCACTCTTCTGATGGGCAAGGCTCCAAGCAGGATTCTGAGTCGCTAGATGGTCCCTGCTCTTAGAGGCCTTAGAATGGCACTGATTTACTCACAAGAAAGTGGCTTAAAACAGAAACAGGTCTGGCAGAATGGGCCAGCGAGTAAAGGGGCCTTAACCATCAGACCTGGCAGGTCAAGTTAGATCCCGACGACTCACGTGATAGGAGAGAGCCAGCTCCTGTAAGTTGTCCTTGACCTCCATAGACACACCATGGCATAAGCCTGCCCCCTCCACAACGCAAATAAATGTATAATGTGTTCATTTATATTAAAGGATGAGCTAAGTGGTACAGGACACAGAATAGATGCCACAGGCGTCTTATGGAGCAGGAGATCTGAACTGAGACTGCACGTTACAATTGCCCAGAGAAATGTTCCTGTGCCCAGACCAGGGCCCACAATCTCCATGGGTAGGCCTCAGACATCAGTTTCTATCTGAAATCACCCCCTAGAAGGCTCTACTTTGCAGTTAAATGAAGAACTCCTGCTTATTAAAGACAGCATTACAGAGGGCCTAGCACTAACATGGGCAAGGCTAGGGTCTCGTCGGTAGTGCAATATGTTAGATGATATTCTCGACTGATTGAAGTGCTGAGGCCCACAGTCTGTGGAGAGAAAGGCCTGTGGGCCCATTCCTGTGTCAGTGCCATTTGCCTGGAACAGCACAAGGCCTGGAGGCAGCAGCAGGTCAGTGGTCACCTTTGCAGAAGCCGTAATGAGCTCCTTGTTGCTTAACTTGTTACAGAACATCCATGGTTACCTCTCCGGGGACTCCTCTGATTCATTACCTCATTTCCCAGGCCTGGCAAAGCAGAAAAGCTGTCTGTCCAGGGAATGGGACCGAGGCTGCAGCATGGGAATCAGGCAGGAGAGCAAGCGACAGTGTACATTTTGTGGAATTCTTTTCACAGAGCCTGTTTTGGGGCCCTTCTTTGGCCTAAAATATACCTTTGCTATTCTTACCAAGAGCTTCCAATTCTAAGGAGACCCACTGCTTTCAGCCCTGGGTAAAGCAGGCAAGGATGAGCGTATGTTCCAGAAACTGCGGTTCTCTACCTGGGCCTGCAGAACGAATCACCCTGTTTCAGACCTGGCTTCCTCGGGCTCTAGAGCAGCTCTGGTTTGCAGGCTGTGATCACCTGATCCACTTAAGGGCCACTGTGTAAACAAGTCATCCTCAGACTTTTTCTTCTGCACTGCTGTGTAGAAAAGAGTTTGTGAGTGCCCACCACACCCCCCCCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTGCGTCTGTGTGTAGTCTGATAATGAATCCTGACAAGTGAATCTAGAAACCTAGATGAATATGGACCTTTTAAGAGACACGAGGTGGGGCCAGGTGGTGGTGACCCAGGCCTTCGGTTGCAGCCTTCAGGAGGCAGAGCAGGTGGATCTCTGAATTTGAGGCCAGCCTGGAATTCCAGGAAACCCTACCTAGTTCTACCCAGAGAAACCCTGTCTAAAACAACAAACAAACAAAGAGATGACAGGTAAAGTCAACATGATTAAAATCTTCCAACATTATTGATAGAAGGAAGAATTATGGCGTAAACACGCCTCGTAAACCGAAAGCCTCGCAGTCAGGCTCACATCGCTGACGTGAAGCCTAAGTCCTAGAATTTGAAACCTGCTTCTAAGTCTGTGTGTTTCAGAAACCAACTGTCATTGGATGCACAGGTAAACAGGACACGCCTACGTGGGCACAGATCTGTGCTTCTGGGTCTGGGCTCATTCACCCGACATGCAAACGCTCTGGGCTGGCTTGTGTTTGCAGGTAAAAGGAAATGCGCAAATTCTGGACATAGATCTGCATATGTGACACCTGTGTAGCATCCCTGGCAGTGTGATATAATTATTAACTATCTTGTGCTTATCAGTTTTTTTAAAATTAACTTTACACCAAACCAAAGTTCCCCCTCTCTCTTCTCCCAGTCCTTTCCCTTGCCTACCTGACGACCCCCCGCCCCCACCATCCACTCCTCCTCCCTTTCTCTTCAGAACAGGGGAAGCCATCTTTGGATATCAATCAGTCTTGGCATATCAAGTTGTGGTAAGACTAGGTGTGTCTTCTCCTACTGAGACTAGACAAGAAAGACCAGTTAGGGGAAAGGGATCTAAAGGCAGGCAACAGAGTCAGAGACAACCCCTGCTCCTACTGTTAGGGGTCCCACATGAAGGCGAAGCTACACAACTATAACATGTTTGGAGGGCCTGGGTCAGTCCCATGCAGGCTCTCTGTGAGCCCCTGTGCGCTCAGGTTAGTTGATTCTGTGGCTCTTCTCGCCGCTGTGCCTATCAGCTTCCTGTTGTAAAGACTTGAGGCAGTTTTTATCTCGTCGTTTAAAAGGTCTCAGCCCATGATCAGTTGGCCCACAGCCTTGAAGCCTACAGTAAGGTGAGGAGGAACATGGAGCAGATGAAAGCTGCAGACATTGTGGTTGGATCCCAAGAGTTCGCAAAGGTGCTCCAGTGGTGAGACCTCCTGTCAGGGCCAAGCTAGGGACTCTGCCTTTAACGTACGAGCCTTTAGGGGACACTGAGAGCCTGTCGCTCATCTATGTTCAGACATTCGTGTTCACTGGTATTCTGGTTTTGGCACGGGTTCTTTGAAAGTTGGAATTCTCAGGCCTCATCACCTTTTCCTTGAAGGGGCAGGTTTGGGGATGGGGAGTTGATGAGGGAGAGGGTTTTTTTCAAGGAGGGTATGTCCCTAGCTTTGTATTTGTGTGGATGTATGTGGTGTGTATGGGTATGTGGGTGTACAGGGGTGTAGTTGGGGTGTGTGTGTAATGTGTGTGTAGTGTGTATGTAGTGTGTGTGGTGTGGGGGTGTGGTTGGGGTGTGTGTATGTAGTGTGTGAGGAGGTGTAGCTTGGGGTGTGGTTGGTGGTGTGTAAGTATGGGGTGTGTAGGTGTGTTTGTAGTGTATGCGTGTATATGGTGCGGGGCTGTAGTTGAGGTGTGTGTATGTAGTGTGTGTGTGTGTGTGGTGTGTAGTGTGTGTGTGGTTGGGGTGTGTGTGTGTGTGTGTGGTTGGTGTGTGTAAGTGTGTGGTAGTGGGGCTGTGGAGGTATGGTTGGTGTGTGCGTATAGTGTGTAGGTGTGTTGCGTATGTGTGGTCATTGTGTGTGTGTATAGGTGTGTGATATACGGTGTGGGTGTGGTCAGTGTGTTTGTGTAGTGTGTGTGTGTGTGTGTGTGTGGTTGGTGTGTATATGTGTGTAGTGGTAGAGCTATGGGGGTGTGGTTGGGGTGTGTGTGTGTGTGTGTAGTGTGTGATATATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGATGGGAATGCGGCATGGGGGAGCAGAGGTCAGCCATGGTGTCTCTTCTATTGCTCTTGGATTTTTGAGATAGGACCTTTGACTGGACCTGTAGCTCATTAATTTGGCTGTCTCTGTACCCCTGTCCTACACTGGCCCCCACTCTAGCACTGGGATTACAGACACACTCTCATGCTAGCGTTTTGCATGTGTGCTAGGGATCTGAACTGAGGTCCTTCTATGTCTGTAACAGGCAGTTTACCCAGTAACATCTCCTCAGCCTCAATATGTTTATACCTCTTTAAAATTTTTATTTTTACTTTACACATATAAATGTTTGTATGTATGTATGTGCACCATGTATAGACCTGGTACCCATGGAAGCCAGAAACTGGCATCAGACCGCCTAGAACCAGTGTTATAGAACATTGTGAGCTGCTACCTGGGTGCTGGGAACCAAACCTGGTCTTTTGCAAGAGCAGTCATTGTTCCTAAATGCTGATCATCTCTCTGGCCCCTATTTTTTAAAGGCTATTTCACACATTATTTTCACACAGTTATTTGTTAGTTTAATTTTTAAAGGTCTCTAGGTTTGGAAATTTCATGAAAGAAATCCACACCCCCGCTCTCTCTCTTTTTTTTTTTTTTTTTTCTTTTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTGCTAGGCAAGTGCTCTACCACTGAGCTAAATCCCCAACCCCTCACCCTCTCTCTTTTAAACTGCCCAGTAAGTTCTGAGCTAGCCTGTGAACTCTGTGTCACAAAAGGTGCTTGTCATCACTTCCCAGGTAACTGGGAAGTTTGCAAAGCTTTGGTCAGTCTCTTGTGAGACATTTTATTATGTTTCTTCAGTGTGCATATGCGCCTGGATAGGGAAATCAAAGGACAACTTCTGAGAGTCAGTTCTTTCCATCTACCACAGGTTCCTAGGGTTTGAGCAGCTCCCCAGGGTTGGCAGCAAGCGCCTTTACATACTGGGCTGTCTTACCTGCCCTGTCTCTTTAAAAACCTCGTCCATGATACTTTTTTAAAAAGGTATCTTGAAGCATGGAGACCTCATGCCCAAGATGCTTAAGAAAACTCCTGAGAGCTGCCCTACCCATGCTGCGGCTCTTCTCAGGATGTCCCAGCCACCGCCTCATGACCAGAAAACCAGAGTCCACCCATGTGTTAAATGCAGCTTTCTCCTTATTTTTCAAGAGTACAAGAAAATTGCTCACTGTTCCTCCACTGTGATGTACTGTCTTGTTCGTTCTGCTCGGAAACAATGGGTAAGGCTCACAGAAGGGCCATACCCTAACAATGTACCTTTTAGTCTCTCTTTTATTTGATTATATGTATTTCGTCTGCAGAATCCATTGCATTTGACATTTTCCAGTGTTTAAATAGCCTCAGGATAGAAAAGGTCATGAACAAAGTCAGAAGTAGAAGTAAGCCGAATAGGCTTTAGCAGATAGAATGTATCCTTTAACTCTGCCTTGGGGCCTTACGTCTGCTAGGCACAACGGCACATGACTTACTGCCAGCACTTCTAAGGTAGAGGCATATGGATCTATCCTGGATATTAAGGCTATCCTGGTGTGCATAGCAAGTTCTAGGGCAGATTGGTTACATACTAGACAGACCCTGTCGTCATCATCATCATCGTCGTCATCATCATCATCATCGTCGTCATCATCATTGTCGTCATCATCGTCAACCTCGGGGTCTGCCTTTATCTCTGTCTCATTGTTTGCTACTGTCAGGATCATGTCCGTGCTCAGGGTAACAGAGTTTTTCTCACAAACGTCCCTCCATGATCCTACTGGGACCCCTCAGTGATAGAGCAACTTGAGCACTGTGGTCAGCCAGCCCTCTGCCCGTCTTACTTGCTGTTCTGAATACATACAGCTAATTCCTGTCTGCTCCAGGATTTTATTTGGAAGCATTAGGACATGTGACCTTGTTGGAGGAAGTGTGTCACTGGGGGTAGGTTCAAGGGAGGCCTAGGGGCTTACTCTCCTGTTGATCCAAATGTAGAACTCTTGGTTCCTTCGCCAGCACCGTGTCTGCCTGTGTGTCAACATGCTTCCCCCATGATGATACTAGACCTGAGCCTGTAAGCCAGCCCCAGTTAAATACTTTCCTTTGTAAGAGTTACCGTGGCCACAGTGTCTCTTGGAAGCGATGGAAACCTTTACTGAACTGTCCACCAGTTAGAAGAGAGCCGAGCATTTCTGGACTGTAAACGCCTTAGCTTGAGAGCATTGTCGTGTCCATTGGTAAAGCCTTACCGTGCTACATCCGTCACAGTAAGCATTTGGCAAATGTTCACTGAACGAATAAATGCTTGGTTTTGTGTGTTCTAAAAAGCCACAGATTCTGTCAGCAAATATTAATTAAGTACGTTCAGTGCGTGCACACAGACCTTTGGTCCTGGCTGGATGCTGGGAATTCTCCAGATTGATAATCAGATGCTTTCCTAAGAGCATCTTAAGTAGGGCAAAGCAGTTCCTATGCTGAAAGAAGGGCACTGAGAGTGGCCAGCCCCACCCACTAGGACACCTCTGTGTCACATCCCTAGGTGAATCACCATGGCCATCAGTCTCTCTGCATCCTCAGCAGGCCGACTCGTGGCTTTATTAGGTTCCTTTCTTCTCAGGGCCTGTGATTTTACGGAGAGAAATGCACCAGTGCTGGGCACAAACACATGGCCTGACACCGACTCCCTGTCCACTTTACTCACTGGCTTTGAAGGCCCCTCACTACCCTCAACACCAAGCACCATGCCTGCAAGCATTCATATGGCACAAAGAAGTCAGATGACAGGGCTCAGGGAAGCTGCCATGGTGGGCAAGTGGTAGAGTTCTTGCCTGGTGTACGTGGGGCCCTGGCTTCAATCCGGACACCGATTGGGGTTCTGCCAGCTCACTGCTGAGCAGATAGATGTACCACAGTGCTCATGGGCGGCACAACCCTAGTCCCCAAGCCATATACCTATTTGATTGCCCACTTCGAATACAAACATTGAAATACTCATTGCCTTGTGCAATGTTTGATATTTTAACTGGGAGCAAACAGGCCTTCCCTTTCTGATTGTTTCGTCAGGAGCAAACTGAGCCCTCTTCAGTTGGCCATCCTCAGAGGAGTCCTACAGGGGGTGGAGGGCTAAAGTGACCCAGTAAGTCTTGGCGCTTGCTCTTGTTCCGTCCCCGGGGTCAGCCTCAGATCTCAGCCACTGCCACTTCTGAGGACTCTATGTGCCACTGAATGTCAAGTGCGTTAAGGAGCTTTGACTTCCTTCCCTTGCACACGCTGGCTTTCGAAACCAAGAAGTGTTCCAGATTTTGTAATTCTAGGATCTCTTCCTTTAAATGCCTTTGCTCAAACAGAACATGCACAAGTGCAAATATGCCTTCACGGAGACTTCAGATAAGGCTTAACGAGAATAAAGCAGTAAGCAGAGCGTTGGGGGGAAGTAGGAGCAAATTAAAGCAGTAAAGAGGTGACGGGGCTGACTCTAAGGTCACAATCCAGAGTGACACATAAAAACATTCGAAGGATGTTCACCATGTCTAGAATATGAAAGATATATATATATAATGAATATATAAATATATAATGTATATATATATATAGTGTGTGTGTGTGTGTGTGTGCGCGCGCCCTATATATAAAAGGTAGAGGCTAAGACGGGCTGAGGGTCAAGCGTTGACACAGCTTACGTGCAGTTTGGTCTTGGCCAGTACTTTCTTTTGGTCTCTGTCAAGGATGATAATCCTAGGGACCGGAGCCACATTAGGAAGCTGTGAGCTCACAGCGCCAGGCACCACTGTAAATACACATCCTGTAGCTCTGCACCTCGCCACCGTCAGAGCTGTCCTGTTTTAGTGGTACCCTATTCTGAGTGTCGCTGGGGGGCCTCGAACCTTTCGAATGTCAGACAAGTGCTCTACCCTCTGATCTACACTCCCTAGTCCCTAAGGAACAGACCCAGAACTCATGTGGCTCTCTTAGTTTCTAATTTAGTAAAGGGTGTTTTGTGGTTATTTTTCAAATTACGCTGAAGCACCCTTCATCTACCAAAGGTGCCAGCGCGTCATGCCTGTAAGCCCCAGGTCCCTCCAGATGTCCCTGGAGATCTCAGCGCTCCTGCTCCCTAAGGCTGCTGTTTCTGCCCAGGGGCCCACTGGCTCCACCCCGGGTTCGTCTGTGTAGAACTGCAGCTCCAGGCCACCCGCCCGCAGCCTTGCAGGGACGCCTCCAGCAACCTTTCCTGGAACTAAGGTCAGTCTCTGGTGCTGCCTCTGCCGTCTGCCTGGCGGATGGCGAACTGCATGTGCCGCTCAGGCCTCAGAAGGAATGGGAATAAGCAAGAGTGTGTTTACATTCTCAGACGAGAGCCAAAAAAGGGAACTGTCTACTTCTTAAACCAGAATATTTCTATTTCCTTTTTAAGACAGGGTCTCACGTAGCTCAGGTTGGCCTTGAACTAACTGAGTAGTGGAGGAGGGTGACCTTGAGCTCTCCATCACCCTGCCTGCTAGGTGCTAAGCTTATAGGCATTTGCCACCGTGCCCCATTTATACAGTGCCCTACTTCCCAGCAAACACTCTACCAACTGAACCACATCCTGGGCCCCAAAGCCTTTTGAACTATGACCTTTTAATATCCCTTTCCCGGTGGAGGGAGGAAGTTCATCTTAGATGAGCGACCGGTCAGCACTGGCTTTAACCAGAGCCTCCCGATTCCCCTTTTCAGCCGAACTGTTTGTGGAAAGCTCTCATAAACATACATGTGGGATAAGGACACAGCACAGTAGGCAAAGGCACTGTGTTAAACTTGACGACCTGAGTTTGACCTCTGGGACCCACATAGACGGAAAGAACTGACCCCCTCATTTGTCTTCTGACCTACACCTACAAACAGTACACACGAAGAATAAATAACTAAAAAGTCACAGCATTAGAAGATAAGCACCGGTCTTACCAAGACACTAAACCATTGCTCTTTATCAGTCTTCTAGAATTGTCTTTAAGACTCTGACCGACAGGAGGTTTAAGGCTGTTGTGTGAGTTTTGGGGGTTGGGGTTTTTTTATGGTCTTTGTTGGTTTTGTTTTTGTTGTTTTTTCCAGACAAGGTCTCAGTATGTAGCCCTGGCTGGCCTGAAGTTCACGGTGATCTACCTGACTCTGTCTCCACCTCTCAAGCGCTGAAGAGAAAGGCCTCACTGCTCCTGGCCTGGTGCAGTTTCTGCATTTGTTTTGTTTGGATTTTTGGTTGTTTGGTTGGGTTGTGGTTTTTTTGTTTGTTTGGTTTTGGTTTTTTTTTGTTTTGTTTTGTTTTTTGTTTCTTGGGGTTTTTTGTTGGTGGTGGTGGTGGGTTTTTTTTGGTGTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCACCCACCCACCCACCTCCACCCTCCTGATTTCAGTCATGCCATTAAAAGCCATGTTTTAAAAGTAGAAATGGCAGGAGGCTGATACCACAAGTTTGAGCCCAACCTTGCAAGACTGTATCAAAACAATCCATGTTTTAAAACTCACGTGCGAAATTTCTTTACACCTTCAACGTATAAATTAGCTTATGTTTTTAAAAGGCAAGATGTTTAGTCCTATTTAATGTCTGTCTCAAAAGGACAAGATGTTAGTTTTTTTTTTAAGCGTTTTTAGATTTCTCTCTTTTTTAAAAACTGCAGTGTGTATCTGCGTGAGGGCGTATGCCCTTGAGTGCAGGTGCCCACAGAGGCCCAGGTATTGGATCCCCTGGACCTAGAGTTCCAGGCAGTGATATCCTGCTGTGGATGCTGGGAATGGAACTCGTCCCTCTCCAAAGGCAGTGTGGAGCCTTAACCTCCGTGCTATCACCGCAGCTGTAAAAGCATTCTTTATAGAGATTATTTTTAGCTGTAAAAGTAAAAACAGAAAAAAAAATTTTTTTGGGTTTTCATTTTTGTTTTAAGACAGGGTTTCTCTGTGACGACTTTGCTATTTTGAAACTCGTTCTTATAGATCAGGTTGGCCTCAGACTGATAAGAGATCCACCTGCCTCTGCCTCCAGAGCTCTAGGATTAGGCACCACCACTGCCTGGTAGGGGTTGGTTCTTCACCCCATGGGAAGTCTCCAGCTACTCACGTTAGAAGTACGTTAGCTTTTACACATTAATAAGTGAATGTGAGTTACCTGTGTGCCCTGTTTTGCCTTCATCTGACTAAGAGTTGTTGTCTGGTTAGTATTGACCATGAACAGTCTCTGACTGACTGATCTTAAACTGTCCGCCGTGAGTCAGGCCGGCTTTTCCCCACTTGGAGAAGCTAAGCTGGGAAGTGCTTTCTCTGCTTGCAGCTCTCAGGAGCCCTGGTGTTTCCCTCCCTCTCCCGGCTTCACACCTGGACTTCCATCCCTTCAGTGTGACAAATGGGGCCCTCCTGACTGGGTGTGCCCAGGTTTACCCGAGTTTACTCAGACCACCTACTTCTCCAGCAGGTCAGCAGCTCAGTGTGTCTGCTTCCTCTACTTGAAAGGCAGTAAAGCCCAAAGTCTAAATAGGAAAACATAAATTTCGTTTTTGGTTTCGCTTGTGTTTGATAAACTCTTAGCTGATTTTCCCTCCAGTTGTGGGGGCCAGAATTAAATGTTTGCATTTATCTGTAATATAGGAGAGATACTTTTAGGATGCATTTTCTTAGACCAGATGTAATGGCACGTGCCTATAATTCTGTCAGAGGCAGAGGCAGAGGATCACTATGGGGGCAAAGTAACCTGAGCTATCCTAGTGAGTTTCAGGCCAGCCTGGGCTACATGCCAAGACCCTTTCTCAATAAGGGTGGCGTAAAGGAGAGAGGGGCTGGTTATGTGTAGTGAGGATTTGGGTTCCAGTATTTGTAATATCCAGAGGAGAACTTGGCTCGTAGATTCAAAAGAGGAAGACTGATTGTTTTCCTTGTACAACTCCCTGACCCGCTGGGCTCCCGAGTCAGTAAGGCCACTGAAAGCCGCAGTCCTTGGCCTCTGCTTCTCTCTCCCTCCATGTAGCTCCCCTCAAGTCTTAAAAACCACCTGTAGCCAAGACACGAAGCTGAGTTTTCTTGGTTTTAGTTGGTTAATTTAGTGCATGTGTACACATGCATGCACACACACACACGCACACACACACACACACACACACACACACACACACACACACACGACCACACACAAGGATAATTTTTAGTTCTCTTTTACCTTTACCTATGACCCAGGGATCAAACTGGTTGCCAGACTTGGCTGCAAGCACTTTTCCCTGCTGAGCCTCTCTCTAGCCTTGAGTTTTCTTTTTCTGGTTCTATACTGCTTTCAGAGTAAAGCCAGTCAAGGCTGGGGCTTCTGTAAGTCAGAATTTTTTGCTATTTAATGGGATGTGCATCGTAACGAAAGCATCCGAATAGTGTTGGTCAAATAATAAATACCACAGGAGCAGTGGAGAGCACAAACAAAGCATGTCGCTGGGTGGGTTGGGAAGCTCAGTGGGTAAAGGCATTGCCTCCAAGCCTGATGACCAGAGCTGGATCCTCCAGACCCATGGTGGGAAGGAGAGAACAAGCCCCTGCAGGACAGGTTTGTCCTCTGACCTCCACAGGTACGCCATGGCACTTGTAAGTGCACACATGCATGCACACAAGAATAGATAAAGAAAATGTAATGAAGCGTTTGAGGAACAAAACACGGCAGTTGTCCTGGAGTGTGTGCGCTCTCTCTAGACATCTAGAATGTTGTGTTTGGGGCATTAGGAAGGCTTGCTTTCCTCGAAGGGCGTGTTCAGGTGTAAGCGAGGAGGGCGAAAGAACGTGGAGGGAAAGGGCTTGTAACGATTCCCCAGGTAATCATGGTCTGTGTTTCCATGGTGCTCCAG
Seq C2 exon
TTGTCCATCTTTAAGTCTTGATCTCTGGTTGGCGCTGGCACCGTGCCTGCAGGAAGATGGTGGTGCTGCGGCAGCTCAGGCTCCTACTCTGGAAGAACTATACTCTGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000050057:ENSRNOT00000072789:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NO
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]