HsaINT1011600 @ hg38
Intron Retention
Gene
ENSG00000007174 | DNAH9
Description
dynein axonemal heavy chain 9 [Source:HGNC Symbol;Acc:HGNC:2953]
Coordinates
chr17:11719334-11727922:+
Coord C1 exon
chr17:11719334-11719490
Coord A exon
chr17:11719491-11727817
Coord C2 exon
chr17:11727818-11727922
Length
8327 bp
Sequences
Splice sites
5' ss Seq
AAGGTACAG
5' ss Score
8.04
3' ss Seq
CTTTGTGCATTTTCTTGCAGTCT
3' ss Score
9.31
Exon sequences
Seq C1 exon
GTGCTACATCACCCTCACCCAGTCCCTGCACCTGACCATGAGTGGGGCTCCCGCAGGACCTGCAGGCACAGGCAAGACCGAGACCACCAAGGACCTGGGCCGCGCACTGGGCATCCTGGTCTATGTGTTCAACTGCTCGGAGCAGATGGATTACAAG
Seq A exon
GTACAGTTCCACCCGGCTTCCTGGGGGTGGGGGTGGGGGATAGGAACTCAGGGCACCAAATCAAGGCTAAGACGCATCCGTGCCACCCTGACCCAGCTTCCCCAGGTCTCGGAGCCCAGATCAGGAGGTCTCAGTTTGCTCCTTCGTGGTAAAGTTGGACGTTTGAACCCTGGAGTTTTTTGGCCTCCCTATAAGGCTTTCATGTGATGAGGAAGCACAGCCCTTTGTATTCTCATTCCACCAATGAGCTCTGACCACAGATGGCTGACTTCATCTTTTTGGATCTTTCTTTTATTACCTGCAAAATGAAGAAACTGAACATATATCCAAAGTCCTAATTTCCCTATTTGACCTAGAAACACAGAAAGGCTCACAAGTAGCCAAGATGAAGGCACTTGTCTTCACATAAAAGCTTGACGTATTTGTGCTCTTCTGTAGAAGTGGACATTCCCCAGAATATCAACAGGGGCAGAATATTCTGCAAGGGCAGGCGTGATTTCTGAAAGCAGGCTAATCAACCCCGACTCAGAGCACAGACGCCCACAGAAGACAAGTGCAAAGCTAATATTCATTCAGGCACGTACAATTTTTTAAGAACCAATGTGTTCCAGGTTCTGAGTCACCGAGAAAAGCCAGAGAAACAAAAGGCCCATGAGGTCACTTCTTTAGCTAGAAATATTCTGCTCACAACTGAACCTTATATAGCTTCTTTTTTTCTTTTTTTTCTTTGTGAGAACTATTTTCCAATTTTTCTTTTTTTTTCTTTTTTTAATTATACTTTAAGTTCTAGGGTACATGTGCACAACGTGCAGGTTTGTTACATATGTATACATGTGCCATGTTGGTGTGCTGCACCCATTAACTCATCATTTATATTAGTTGTATCTCCTAATGCTATCCCTCCCCGCTTCCCCCACCCCACGACAGGCCCTGGTAAAACAAAAATGTAATAACAGATTATCTCCCTCTCTCGTTATTTTTGTTATATTGTATGTGTTTTTGTAAACTGCCTTAAGTCCCTTTTGTCAGCAGGATGACATGCAAATAAATTTGCAGTGAAAAAAAGTTGCATTAAATAGATTAAACATTTATATATAAAAGTCATGTGCTATATTGACTGTAAAATAAATTTAATGTAGTTATAATTTTAGAAATAATGCTTGCCGTTACCACGTATAGCACTCTGTAAATGAGATTCATCCTCTATAATTTAATCATTTCTGTAGCATGATTTTGTTGTGTAGAGTTGCAGCGTCCTGTAGCACCATGTTTTCTCGTGTTAAGTAAACAAAGCAAGGATCTAGACCCAAAAAACTTGTCTTCCACGTGGTCTTCATCCCCTAAATTTTAGCACAGTTGCTTTTATTGATGAACACATTAAGATAATGTTTCTCTTTAAGTCAGGCTGGAACAGAAAGGTGGAGTTTTCTCCCCCCTTTATAGAAATGACCTCAGCCTTAGGGATAATTTTATGTTCTAGATTTTTCTATAGTTGAGCAATGGCAGCAGCACTGCCAAAGTAAGTAGAGTCTCCCAAAGGGAACATTGTGAAAGAAACACTCATTTGGATGTAGAAGACGTGGTGTATTGATTGAAGAAAATCAGCCAGATTTCTTCAAAGTCATACCTAGAATAGCAAGCAGGAAATGGTGAGTTGGCTAGGGGTCACTATGGCCATTTTACTCAATTCTATCAAAACCAATCACTGAACCCTAACCCCACCAATTTTGTTAAAAGTACAGGGTGAACGGGGGAGTCTATCTTTGTTTTTTTTGTTTGTTTTTTTGTTTTGTTTTTTGTTTTTGTTTTTGTTTGTTTGTTTTTCAACTATAGGCTAAGCTTCCATGGAATACAGGCTAGACACAGGTTAGAACATCATAAATAAGCATAGCCACAGTGAAACATGCCAGAAGGGAGGTGCTCCCTTCCTGGACACCAAATATCCCAGGTAACCAAACAGCCCCACTAAGCTGTTTGCAAACTTCCTCTACCTTTGTTTTCTGGCTGTTCAGAATTATTTTTTATGGTAAAACACTCGCAATCCAATTAATTTATTGAGTATTGCCTTTCCTCAGCATGTGCTGAGCATTGTGCAGGATGCCAAAAACAGATCATATGGGGAGAGAGAGGGAGAGAGAGAGAGAGAGATGGATGGAGGATAGATGGTAGATGGATTTTAGGTAGATAAATGATAGATGAATGATTGATGAGAGAGAGAAAGAGAGAGATAGTATAACCCGATTTTATTTGGAGGGACAAAGGATATATGATATCATCAGGGGAGCTAGTTAACACTCAGATAGCATAACCCTGGGTGCTCATGTGCCCTACAAACTTTAGGCCCTGGAATATTCCAGAGTAGGGGGAGAGCCACAGAGTGGGCTGGTCAGGAAAGACATGTGGAGGACGTGATACCCAACCAAGGCTCAGTTTTGGGGTTGGTGACAGAGAGAGCATGTGGCATTTTCACACATTCTAACCCATTAGAATGTCAGCTTTAAAGCCATGACCAAGTTCTATGTGTGGCCAATATCTGTCCCCAGCCCTCATTCTGACTTCACCCCATGAGCCCTCCTCACAGGACCCGGCTGGGAGAGGAGAAAAAGGGTGCGAGGTCAGGAAGAGCTGCTGTGCACTTCTCCAGGGGAGATTTCGATGTGTCATTCATGACACTCACAGCAATATACTCTGTTCAGGTCTGTCCATAGTGAAAGCTAGAAATAAATGCGGAACAAGGGCTAAGCTACCTTACAGAGGATCAAAAACAGGAGATAAGGAGGGGAAGGACTGAAAGCCACTGAAAGCATCTCACCTTGAAGTGGGGGATGCAGAAAGGAACTGCAGGCTTCGGAACTGGAGCAAAAGCATAAAGATTGGAAGTCAGACGAAATGAGAAAGGAAGAGACTGGAAGCAGGAATAGGTTTTGGTGAGAGCATCTCAGTCATTCAAACCAGAGGGAATGAGGAACCAGCTGATGTGGTAGTAGACATGGAAAAGCATAAGAGGCTTAAAATATAACAAGGTAAGTGATATCTCGGGAATATGGGCAGGCAGTCAGTGGTGAAGCAAAGGGAGAGGTTGAAGAGGAGAGTCTAGGCTGTGGTCAAGCGCCCTTGCTATCCCCTCTGCCTTAGAAATCCTATAAGCCGCATCACCTCAGTTAGCTCATGAGGACTGGGTGTGCATTGAGCTGGGGAGGACAGGAGAACAGCGCAAAGACTTGAAGCAAAGGTAAAGTTATTGCTTTACTCTCTTATCCTGGATGGAAAACCTATAAAACCAGCCACTTTCTCTGAAAATGACTGCAGTTTCAGTGCTGAAACATCCTTTATATTATAGCTGTAATACTTTCCCCTCTTGACCTCAATTTGGAGATGCTATTGCAGGGACATCAAATGGTTCCAAACCTGAAAGTGTTTGGAATTATTTCCAACCCTCTCTGTAGCAGCCATATTGTGGATACTACACTTTTCCTTGAGACCCTACTCCCTTCACTTCGGAAATGCTATACTTGCACAGTCCTCCTCCTGAGTCTCTGGTCTCCTGGCTCCTCGGTCTCATTTGCTGATCCTCTTTTATAATTTCCAGTGTGATGTGTATACCTATGTCTCCTTTATGAAGCCATGTCTATTCTCCAGCTTCACCGGAGTCCTAGTCCCGTCTCTCTCTAATGGGGCAGTGGGCATCTCTTGAATGCCCTTCTCTTGCATTGTGGTTAGCACTCTTCCTTTCTCCCTGCCAGATTCCCCACCATCAGGAAGGATCATCTCATTTTCCCTGAGATCCTGGTGGAAAACTTCAGGAACCTGGGTTACTTCATGTCCTTCCTTCCCTACCTCTAATCGGTCACCAGTGTCGATTGTTCAGCACCCTTCTCACTTCCAGGCCTTTGCCCTATTCTTGCCATTCGCCTAGTCCCAAAGCTCACCATCCCACAGCAAGATAATGCCCCAGCCTCGCTGACAGGACCAGGAGATATGTGGTGAGCTAAACACATGGGTTACTTTAGGGTCCTGGGGTTCAGCCACAGGCCCTGGGGTGGGGGGGAGAAACATAGGGGTGACAAGCATCCACCTATGGAAACTCCACTTCCTTTATTTTATGTTTTGAGTTTTCATTTTATAAAAAGGGTCTGCAGTTTGAAAAGCTTTCAAAATCACTGTAAAAAATTGAATTTTTTTTTTCTTTTTTTTTGAGATGGAGTCTCGCTCTGTCCCCTAGGCTGGAGTGCAGTGGCACGATCTCAGCTCACTGCAAGCTCCACCTCCTGGGTTCACGTCATTCTCCTGCCTCAGCCTCCCGAGTAGCTTGGACTACAGGCGCCCGCCACCACGCCTGGCTAATTGGTTTTTTTTGTACTTTTAGTAGAGACGGTGTCTCACTGTGTTAGCCAGGATGGTCTGGATCTCCTGACCTTGTGATCCGCCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCCGGCTTGTTAAAAATTGAATTTTTAAAACATCTTTTTTATTGATACATCATAACTGTACATATTAATGGGGTACATGTTATATTTTGATGCACATATTATCAATAATATTTATCAATAATATCAATAATAATTATGAATATCATTATACATTGTAGTATAATGATCGAATCAGGGTAATTAGGATAACCATCATCCCAAAGATTTATTGTTTCTTTGTGTTGGGAACATTCCAAATCTCCTCTTCAGCTATTTTGAAATATAAAATAAATGATTAGTAATCATAGTCCCCTATTGTGCTGTTGAACACTATAACTTATTTCTTATGTCTAGCTGTATGTTTGTACCCATTAACCAACTTCTCTTCATTTTCTCCTTCCCAGCCTCTGGTAACCATCATTCTACTGTCTACCTCCATGAGATCAACTTTTTTAGCTCTCACATATGAATGACAGCATGTGATATTTGTCTTTCTGTGCCTGGCTTCTTTCACTTAAGATAATATCCTCCAGGTCCATCCCTGTTGCTGCAAATGACAGGATTTCATTCTTTTCAATGGCTGAACAATATTGCTTTGTGTGTATATACTACATTTTCTTTATGCATTCATCCATTGATGGACACTTAGGTTGATTCCATATCTTAACTATTGTGAATAAACATGGATGTTGATTTCTGAATTTCCACTTAGTATTTGTGACACTTGGATTGTTTTGCAAATGAAATGGAATAATGTAAGGCAGTGGTCCCCAACCTTTTTGGCATGAGGGACCAGTTTCATGGAAGACTATTTTTCCATGGACTGTGGTAGTGGGGGATGGTCTCGGGATGATTCAAGCACATTACATTTATTGTACACTTTATTTCGATTATTATTACATTGTAATATACAATGAAATAATTATACAACTCACCATCATGTAGAATCAGTGGGGGCCCTGGTCTTCTCTTCCTTCAACTAGTTGGTTCCAACTGGGGGTGATGGGAGACAGTGACAGATCATCAGGCATTAGATTCTCATAAGGATCACCCAGCCTAGATCCCTCACATGTGCAATTCACAATGGGGTTCATGCTCTCATGAGAATCCAGTGCTGCCACTGATCTGACAGGAGACAGAGCTCAGGCAATAATGCAGGTGATGGGAAGCAGCTGTCAATACAGATGAAGCTTTGCTTACTCACCTGCTGCTCACCTCCTGCTGTGCGGCCTGGTTCCTTAACAGACCATGGACAGTTGCCCAGAGGCTGGGGACCCCTGATTTAAGGTACACAAACACAACGCCTGGAACTTCCATCACCTCCTCAGACAGGATGTCCCTGACAGCTCAATCTGAAGTCTCCATGTCACCCTCATTTTAAGACTCCAGTGGGACTTTATCACTGTCTGATTTGTTATTGCTCATTGTCTGTTTTCCTTATGGGAATATGAGACCCATGAGAATAGAGGCATCGTCTATCTTGTTCACAGCTGATTCTTCATGACCTAGAACAATCTCTGGCACATAGTATATGCTCAATAAATATTTGTTGATATGAAAGTAAAAAGAAATCTCTTAATTCCAGAAGCTCAGTGAAAGGTGGGTTTTATTTTTCCCTTCTCCTTCAAAGTCTGCCCTACATCAGGACACAGTGGCTCACACCTGCAACTCAAACACTTTGGGAGGCCAAGGCAGGTGGATCACTTGAGGCCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCCGTCTCCACTAAACATACAAAAATTAGCTGGGCTTGGTGGTGCACGCCTGTAATCTTAGCTACTTGGGAGGCTGAGGCAGCAGAATTGCTTGAACCTGGGAGGCAGAGGTTGCAGTGAACTGAGATTGCGCCACTGCACTCCAGCCTGGGTGACAGAGCAAGACTCCATCTCAAAAAAACAAACAAAAAAAATTAAAGTCTGCCCTAATGTCCAACCTAGCCTATGTGGCAGTTAGACCAATCCTCTCATAACAATGCTCTGCTCATGTTCTCTGCTGCAAACCTCCAAAGATCCCTCATAGTAATTCAAGGCTTTTTACAACCATGACTTTATTTAGTAATTCAACTTTCCAATCAAAATGGCTCTGTCATTTTTCTCTGCACATATCATTATTCTGCTTGTATTTCTTCCATAATCTTCCTCCTCCTGGAAAGCCTTACCCCTTCCATTCTATCTATACAGATACTCCTATCCTATAAAGCCATCATTTCTTGTGTGTGTCCTAAAGCATGTAGTTTTCTGTGAGATCCCCATATCTTCTGACTCTAATCTTGTGACCTTTACACTATACCAATAATTGCCAGAGTGCATTCTGAGAAAATCAGGGGTTATGTGAAGGAAAAATAATCCTAGCCATGTAATGCAGTGAAACTAATGTTTTTGTTATAGGATTTCTCAGGGCCCTTAAACGCTAATACAAATTGTAAGTAGGCCAAAACGGGTTGAAGAATGTGTTTCCCAAATTTGCTTGACCAAAAAGCCCTTTCTTCGAAGAGCATCTTTCAGGCCTGTGGTTCCGCGGAATAAACTTTGTGAAGTACTGTTGTGCTGCCATCTGACTTTCACCTCTTTGGCAAAACTGATCACTCAGGAGCACTCTGACCCTCTCTTCTGTGAATATGACATTTGTGGTCTATATTATTCAATGGAACCACTACTGATGCAGTAATTTTCCTGTTTTTATGTATATACCTTATCTCCTCAACCTGACCAAAAGTTCTTAGACTGAGCTCCCCTATGTCCAGCACATGATCGGTGCACAGAGCTGATAGTCAAAAAATGCCCACTGAAGGCTGGGCATGGTGGCTTATGCCTGTCATCCCAGCACTTTGGGAGGCCAAGGCGGGTTGATTGCAAAGTCAGGAGTTTGAGACCAGCCCTGACCAACATGGTGAAACCCTGTCTCTACTAAAAATATAAAAATTAGCCAGGCATGGTGGTGCACGCCTGTAATCGCAGCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCTGGGAGGTGGAGGTTGCAATGAGCCAAGATCGCACCACTGCACTCCAGCCTGGGCAACAGAGTGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCGCTGAATAAATGAATGGGACTTTTCCATTATTTGCATTTCCCTGGCATTTTAATGACGTCTCCTTGCCAATGACCTTGTGAGTGTCTCCCAGGAACCTATCTTTTTGGTTGCCCCGTGACTTACCAGTTCATATTGAATGCCCAGGATGGTTTTTACTTTTAGGACAGAAATGCATTATTCCCTTGTAAATTCCTTCCCTGCTCTCATTTGAAAAGATTTACCTTTAGTTTGTGTGTATGTGTTTTTGTTTTTTGGTTTTGGTTTTTGTTTTTTTAACAGATGTTATCACCCCCTGTCTTTGTCTCCAGCTCCCTCACCACTCTGGAAAACCTGGGTGGTTGGGCATAAATTTAAAGATACAGACGTAAATTTTTCCATCAGTGCATGACAAAGGCTGGGTGGAAGGCTTTTTGTCTGTATAGCATAAGAAAAATCATCTTTTATTCATTTCCTGGGATTTTGAAAGCTACCGAATCAACAATAATGCAACCCTGATGACATTTTAAAGGGATTTTCATCCAAGTGTCTTGAAAAGGTTCTGTTTAATCCTGTGACTTCTGTTGACACCCCATAACCATCAAACATTTAATTGTTCTTGAAATTTTAATACAAGTTTCTGACCAGTGGTCTTTAGGGGGACTAGAAGTATCTATAATAAAGGGGATGGAGAATGGCTTCAACATGTATTGATAAGCCTGGCCCGTTGGTAATTTAATCTTTGTGCATTTTCTTGCAG
Seq C2 exon
TCTTGTGGCAACATCTACAAAGGCCTTGCTCAGACTGGTGCCTGGGGCTGCTTTGATGAGTTTAATCGAATCTCCGTGGAGGTCTTGTCAGTGGTGGCAGTGCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000007174:ENST00000262442:27
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.132 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF127742=AAA_6=FE(22.5=100)
A:
NA
C2:
PF127742=AAA_6=FE(14.7=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains