MmuALTA0005691-2/2 @ mm9

Alternative 3'ss

Gene

ENSMUSG00000033335 | Dnm2

Description

dynamin 2 [Source:MGI Symbol;Acc:MGI:109547]

Coordinates

chr9:21309908-21311568:+

Coord C1 exon

chr9:21309908-21310159

Coord A exon

chr9:21310777-21310779

Coord C2 exon

chr9:21310780-21311568

Length

3 bp

Sequences

Splice sites

5' ss Seq

CAGGTAAGG

5' ss Score

11.08

3' ss Seq

TATCTTTACTTTCTTTGCAGCAG

3' ss Score

9.28

Exon sequences

Seq C1 exon

CCCCACTCCACAGCGCCGACCTGTGTCCAGTGTGCACCCACCAGGCCGGCCACCTGCAGTGCGGGGTCCTACACCGGGGCCTCCCCTGATTCCTATGCCTGTGGGGGCCACATCCTCCTTCTCAGCACCTCCCATCCCATCCCGGCCTGGACCACAGAGTGTGTTTGCCAACAACGACCCCTTCTCTGCGCCACCTCAGATACCATCTCGGCCAGCACGGATTCCCCCTGGTATCCCTCCAGGAGTGCCCAG

Seq A exon

CAG

Seq C2 exon

AAGAGCGCCCGCTGCGCCCAGCCGGCCCACCATTATCCGCCCAGCCGAGCCGTCCCTGCTCGACTAGGCTGCAGGGGGCAATGTTCTGGGGGGGTCCTCGTGCACCCACAGTGTAGGACAGTTTTGGTGGTCTGGGCCCTGCTACTTGCCCTCCATGCTGGGACCAGGCTCCCCGTGGGCAAGCCCTGCCCTTTCCCTCCTCGCCCTAGTGGACATGACAATGAAGGGTGAGGAGGCCCACAGCACAGCACATGGGGGCTTTGCACTTTGGGATGAGGAGGAGCTCTGGCTAGCAGAACAGGAACTGCATCCTTGGGACCATCAGGAAAAAAAGGTCCAGGCTAGTGTGGGGGGACTCTTCTGGAGCTCCTCCAGAGCCTTTGTTCTTTCTGGGGTCCAGGAACTGCCCACCTTTCCTAAGGACTCCTCAGGAGTGAGCCAGGCCCAGCAGGTCCAGTGCTGACCCACCTGGCTCAAGTTGTATATATAGAGCTCCTTTG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000033335-28-28,28-27-2/2

Average complexity

Alt3

Mappability confidence:

NA

Protein Impact

Protein isoform when splice site is used (Ref)

No structure available

Features