MmuEX0029218 @ mm10
Exon Skipping
Gene
ENSMUSG00000026743 | Mllt10
Description
myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10 [Source:MGI Symbol;Acc:MGI:1329038]
Coordinates
chr2:18171043-18196700:+
Coord C1 exon
chr2:18171043-18171075
Coord A exon
chr2:18186218-18186396
Coord C2 exon
chr2:18196583-18196700
Length
179 bp
Sequences
Splice sites
3' ss Seq
TAAAATTTCTTTGGTTGCAGGTA
3' ss Score
8.54
5' ss Seq
CAGGTATGT
5' ss Score
9.8
Exon sequences
Seq C1 exon
CCTTCTCAGAGTTGCTGAATGCAATACACAATG
Seq A exon
GTATTTATAACAGCAATGATGTAGCCGTATCCTTTCCAAACGTGGTGTCTGGCTCAGGATCTAGTACTCCTGTCTCTAGCTCTCATATACCTCAGCAGTCATCTGGTCATTTGCAACAGGTGGGAGCTCTCTCCCCCTCAGCTGCGTCATCTGTAACCCCTGCTGCTGCTACAACTCAG
Seq C2 exon
GCAAATACCGTTTCTGGATCTTCTCTCAGTCAGGCACCAGCCCATATGTATGGCAGTAGATTAAATCAGAATCCATCCATGGCAGTTCTCATAGCTCAGTCTGAAAGCAGCCAAACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000026743-'55-79,'55-72,62-79
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.143 A=0.783 C2=0.850
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types