MmuEX0053575 @ mm9

Exon Skipping

Gene

ENSMUSG00000048897 | Zfp710

Description

zinc finger protein 710 [Source:MGI Symbol;Acc:MGI:1921747]

Coordinates

chr7:87230837-87237637:+

Coord C1 exon

chr7:87230837-87231028

Coord A exon

chr7:87231320-87231494

Coord C2 exon

chr7:87235221-87237637

Length

175 bp

Sequences

Splice sites

3' ss Seq

TGGTACCCTCCCTGTTCCAGGTG

3' ss Score

10.85

5' ss Seq

AAGGTGGGT

5' ss Score

8.23

Exon sequences

Seq C1 exon

GGTGTGAAGGAGTTCAAGTGTGAGGTCTGTGGCCGGGAGTTCACGCTGCAGGCCAACATGAAGCGCCACATGCTGATCCACACCAGCGTCCGGCCCTACCAGTGCCACATCTGCTTCAAGACCTTCGTGCAGAAGCAAACCCTCAAGACCCACATGATTGTGCACTCGCCTGTGAAGCCGTTCAAGTGCAAG

Seq A exon

GTGTGCGGGAAGTCCTTCAACCGCATGTACAACCTGCTGGGTCATATGCACCTGCACGCAGGCAGCAAGCCATTCAAGTGCCCGTACTGCTCCAGCAAGTTCAACCTCAAGGGAAACCTGAGCCGGCACATGAAGGTCAAGCACGGCGTCATGGACATCAGCCTGGACAGCCAAG

Seq C2 exon

ACCCCATGATGGAGCTGGCAGGCCCTGACCCCTCTGAACTTGACAACCATCAGGAGATGGAGGACTTCGAGGAAAACGCCTACACCTACAGCAGTGTGGACAGCAGCGCGGAGGCCAGCACCCTCACTGAGCAGGCCATGAAAGAGATGGCCTACTACAATGTGCTATAGCAGGCCGCTGAGTGGGCGGGGAGGGCGCAGGGTGAGACCCACATACTGAGGGCTGCCCCTCTGCAGCCCAGAACCAAGCTACTGCCCACTGCCTGGCCCTCCTCCCCCCCAACCCTCAAATCATTTGCACCACTAGGGATCTTTAGACCAAATGGAGACTCTACTACTGTCCTTGCAGGGAGCTGGCCACAGGCCTAGGCATCCCGGTGAGGGAAAGGTAACCAGGAGGTCCGCATCTGGTTCTCCTTGGCCTGCTGCTGTGCGTGGGCAGGGGGAATGCCAGTGAGGCCTCTTACAGGCACAGACTTAGAGGTCTTCCCCAAGCCACCT

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000048897-'9-5,'9-3,10-5

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.333

Domain overlap (PFAM):

C1:

PF134651=zf-H2C2_2=PD(56.0=21.9),PF054957=zf-CHY=PD(73.2=64.1),PF134651=zf-H2C2_2=WD(100=40.6),PF134651=zf-H2C2_2=PU(65.4=26.6),PF069576=COPI_C=PU(40.4=71.9)

A:

PF134651=zf-H2C2_2=PD(26.9=11.9),PF069576=COPI_C=FE(50.9=100),PF0009621=zf-C2H2=WD(100=40.7)

C2:

NO

Main Inclusion Isoform:

ENSMUSP00000050577