HsaEX0074243 @ hg19

Exon Skipping

Gene

ENSG00000140548 | ZNF710

Description

zinc finger protein 710 [Source:HGNC Symbol;Acc:25352]

Coordinates

chr15:90616303-90625432:+

Coord C1 exon

chr15:90616303-90616494

Coord A exon

chr15:90617348-90617522

Coord C2 exon

chr15:90622892-90625432

Length

175 bp

Sequences

Splice sites

3' ss Seq

ACCGGGTTGATGTGTTCTAGGTG

3' ss Score

8.62

5' ss Seq

AAGGTGGGT

5' ss Score

8.23

Exon sequences

Seq C1 exon

GGCGTGAAGGAGTTCAAGTGCGAGGTGTGTGGCCGGGAGTTCACCCTACAGGCGAACATGAAGCGGCACATGCTGATCCACACCAGCGTCCGGCCCTACCAGTGCCACATCTGCTTCAAGACCTTTGTACAGAAGCAGACTCTCAAGACCCACATGATTGTACACTCGCCCGTGAAGCCATTCAAATGCAAG

Seq A exon

GTGTGCGGGAAGTCCTTCAACCGCATGTACAACCTGCTGGGCCACATGCACCTGCACGCCGGCAGCAAGCCCTTCAAGTGCCCCTACTGCTCCAGCAAGTTTAATCTCAAGGGCAACCTGAGCCGGCACATGAAGGTCAAGCATGGCGTCATGGACATCGGCCTGGACAGCCAAG

Seq C2 exon

ACCCCATGATGGAGCTGACAGGCACTGACCCTTCAGAGCTCGACGGCCAGCAGGAGATGGAGGACTTCGAGGAGAACGCCTACAGCTATGCGAGCGTGGACAGCAGCGCCGAGGCCAGTGTCCTCACTGAACAGGCCATGAAAGAGATGGCCTACTACAATGTGCTATAGCGCAAGCTGGGCCACCCCTAACGGGGGCCGGGGGCGAGGGCATGGGGGTGAGACCCATGGGCTGCAGGCTGCACCTCCTGCAGCCGAGAAACAAGCTACTGCCCCACTGTTCTGAGCCCTCCCTCCCCGAGTCATTTGCACCACTAGGGACCTTTAGACCAAATGGAGACTGTACTACTGGCCCCGGCTGTGAGCCAGCACAGGCCCAGGCATCCCAGCAAGGGAAGGAGAACACGCGAGGCCCAGATCTGGGTCTCCCTGGCCTGCTTCCGTGGGGAGTGGGAGAAGTGGGGCCACTGGGGACAGGTCACAAGGGCACCGGCCCTCGGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000140548_MULTIEX1-2/3=1-C2

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref, Alt. Stop)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.025 C2=0.304

Domain overlap (PFAM):

C1:

PF134651=zf-H2C2_2=PD(56.0=21.9),PF054957=zf-CHY=PD(73.2=64.1),PF134651=zf-H2C2_2=WD(100=40.6),PF136961=zf-CCHC_2=WD(100=18.8),PF054957=zf-CHY=PU(51.4=57.8),PF134651=zf-H2C2_2=PU(65.4=26.6),PF069576=COPI_C=PU(41.8=71.9)

A:

PF134651=zf-H2C2_2=PD(26.9=11.9),PF0009621=zf-C2H2=WD(100=40.7)

C2:

NO

Main Inclusion Isoform:

ENSP00000268154