MmuEX6003734 @ mm9
Exon Skipping
Gene
ENSMUSG00000038665 | Dgki
Description
diacylglycerol kinase, iota [Source:MGI Symbol;Acc:MGI:2443430]
Coordinates
chr6:36802516-36815828:-
Coord C1 exon
chr6:36815791-36815828
Coord A exon
chr6:36812356-36812476
Coord C2 exon
chr6:36802516-36802552
Length
121 bp
Sequences
Splice sites
3' ss Seq
CTTTTTTTTTTTTTTTTCAGCTC
3' ss Score
11.86
5' ss Seq
ACGGTGAGT
5' ss Score
11.45
Exon sequences
Seq C1 exon
CAATTTTGCAGGCAGTCCTCACCGGTGACCTTATGAAG
Seq A exon
CTCATGGAGAGCTATAAGAATGGAGGGAGCTTACTAATTCAGGGACCAGGGCACTGTTCTCTCCTTCACTACGCAGCTAAGACCGGCAATGGGGACATTGTGAAGTACATCCTTGACCACG
Seq C2 exon
GACCTGCAGAATTACTGGATATGGCAGACAGTGAAAC
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000038665-'37-41,'37-40,38-41=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.462
Domain overlap (PFAM):
C1:
NO
A:
PF127962=Ank_2=PU(20.2=46.3)
C2:
PF127962=Ank_2=FE(12.8=100)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs: