MmuEX6008297 @ mm9

Exon Skipping

Gene

ENSMUSG00000035279 | A430110N23Rik

Description

RIKEN cDNA A430110N23 gene [Source:MGI Symbol;Acc:MGI:3606211]

Coordinates

chr7:4879987-4881765:+

Coord C1 exon

chr7:4879987-4880295

Coord A exon

chr7:4880839-4881156

Coord C2 exon

chr7:4881604-4881765

Length

318 bp

Sequences

Splice sites

3' ss Seq

CCTCTGTCCTCCTGTTTCAGGTC

3' ss Score

13.17

5' ss Seq

ATGGTAAGG

5' ss Score

9.33

Exon sequences

Seq C1 exon

AGCGGCTGCGACTGGTCTCAGGTCCCCACGGATGTGCCGGCCGCCTGGAAGTCTGGCACGGTGGACGTTGGGGCACTGTCTGTGATGATGGATGGGACCTCCGAGATGCAGCGGTGGCCTGCAGGGAGCTGGGATGTGGGGGAGCGCTGGCCGCCCCTGGGGGTGCCAGATTTGGACCTGGTGAGGGACCTGTGTGGATGGATGACGTGGGGTGTGGAGGAGGAGAGGAGGCCCTCCGAGACTGTCCCCGAAGCCCCTGGGGCCGGAGCAACTGTGACCACACCGAGGATGCAGGGCTGGTCTGCACCG

Seq A exon

GTCCTGCACCCAGGATACGCCTTGCTGATGGTCCCCACGGCTGTGCTGGCCGCCTGGAGGTGTGGCATGGTGGACGATGGGGGTCGGTGTGTGACGATGCCTGGGATCTTCGCGATGCTGCTGTGGCCTGCAAGGAGCTGGGCTGTGGGGGTGCCCTGGCCGCCCCAGGGGGCGCCTTCTTTGGAGAGGGGACTGGACCCATCATCCTGGATGATCTCAGATGTCGAGGAAATGAGACAGCCTTGCGATTCTGTCCTGCGAGGCCCTGGGGTCAGCACGACTGTCACCACCGGGAGGATGCTGGGGCCGTGTGTGATG

Seq C2 exon

GCATGCCTCTCGGTGCTGTGCAGCCTACAGTTCCTGCAGTGGACAGCAACAGCACAGCACACAGGCTTCTGTCTACCTCCGTGGGTCAGATGCCAGGCCCAGCAGGCCCTTGGCCTCCTTCTGCTTCTCCTACTGCCCCTCCAGAGCCTGGGCCCGAAGCTG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000035279-'5-6,'5-5,6-6=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features