MmuEX6063641 @ mm9

Exon Skipping

Gene

ENSMUSG00000050272 | Dscam

Description

Down syndrome cell adhesion molecule [Source:MGI Symbol;Acc:MGI:1196281]

Coordinates

chr16:97041331-97047380:-

Coord C1 exon

chr16:97047105-97047380

Coord A exon

chr16:97042350-97042646

Coord C2 exon

chr16:97041331-97041606

Length

297 bp

Sequences

Splice sites

3' ss Seq

CCTGTTTTGTCTCCCTGCAGACG

3' ss Score

13.04

5' ss Seq

GAGGTGCTT

5' ss Score

3.62

Exon sequences

Seq C1 exon

AGCCACTGAAAGCCACCATCAGTCCCAGAAAGGTTAAAAGCAGCGTGGGCAGCCAGGTCTCCTTATCCTGCAGTGTGACAGGAAATGAAGACCAGGAACTCTCCTGGTACCGAAATGGCGAAATCCTCAACCCTGGAAAAAACGTGAGGATCACAGGACTCAACCACGCAAACCTTATAATGGATCACATGGTCAAGAGTGATGGGGGTGCCTACCAGTGCTTTGTGCGCAAGGACAAGCTATCTGCTCAAGACTATGTCCAGGTGGTCCTTGAAG

Seq A exon

ACGGAACTCCCAAAATCATTTCTGCCTTTAGCGAGAAAGTGGTGAGCCCGGCAGAGCCAGTGTCCCTCGTGTGCAATGTGAAGGGTACACCCTTGCCCACGGTCACCTGGACCCTGGACGATGACCCCATCCTCAAGGGCAGCGGTCACCGCATCAGCCAAATGATCACGTCCGAGGGGAACGTGGTCAGCTACCTGAATATCTCCAGCTCCCAGGTCCGGGATGGGGGTGTCTACCGCTGCACTGCCAACAACTCGGCTGGAGTCGTCCTGTACCAGGCTCGAATAAACGTAAGAG

Seq C2 exon

GGCCTGCAAGCATCAGACCAATGAAAAACATCACTGCGATAGCGGGGCGTGACACGTACATCCACTGCCGCGTAATTGGCTATCCGTATTACTCCATCAAGTGGTACAAGAACGCTAACCTGCTTCCTTTCAACCACCGCCAGGTGGCGTTTGAGAACAATGGGACTCTGAAACTCTCTGATGTGCAGAAAGAAGTTGACGAGGGAGAGTACACGTGTAATGTGCTGGTACAGCCACAGCTCTCCACCAGCCAGAGTGTCCACGTGACAGTGAAAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000050272-'7-6,'7-5,9-6=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features