MmuEX6067739 @ mm9

Exon Skipping

Gene

ENSMUSG00000032425 | Zfp949

Description

zinc finger protein 949 [Source:MGI Symbol;Acc:MGI:1918890]

Coordinates

chr9:88461997-88465916:+

Coord C1 exon

chr9:88461997-88462123

Coord A exon

chr9:88462346-88462438

Coord C2 exon

chr9:88463452-88465916

Length

93 bp

Sequences

Splice sites

3' ss Seq

ATATTATTTTCTATTAACAGGGC

3' ss Score

9.5

5' ss Seq

CAGGTTGGT

5' ss Score

8.08

Exon sequences

Seq C1 exon

GAGTTGGTGTCTTTTGAGGACGTCACTGTGAAGTTCACCTGGGAGGAGTGGCAGAATCTCAACGACGCTCAGAAGATGCTGTACAGGAGTGTGATGCTGGAGACATATAATAGCCTGCTGTCACTGG

Seq A exon

GGCAATGCATCCCTAAACCTGAGTTGATCTTTAAATTGGAACAGGGAGAGGAGCCATGGACAGCAGAAGAACCTGCAAACAAGACTCTGCCAG

Seq C2 exon

TATTCTGCAGTGTGGATGGCATAATTGAGACCAACCAGAAGAGTCGAGAGAGACATTTGTGGCAAGTTACTGCCAGTGGCCACAATAGAGAAACTGAGCAAGCACGTGGACCAGAAGACACTTTTTATTTATACTCCATGAATATTTCAAATTTTGTTGTAAATAATAGAAACTGTTCAGGAGTGAAGCCTGAGGAGTTGAATGGATACCTGAATAGATGTCACCCTTTGGAGACTCATGAATTGTGTATTGTAGAGCGATATAATGACTGTTGTGTAGCAGGGAAATCTGTCAGATGCCCTGAGCAGTTGGGTCAGTGTTCTAAGATTGAAACTGGACAGCAGGATTTCGAATATATCAGAGAAAGGAAAGATACAAAGGAGGGAAAACTATTGAAAAAAATTACTCCATCTAAGAGACTTCAAGTGGGACTGACTTCTTGTAAGCATAGTGAGTGTGAGCCACTTTCTGTTCAGTCAGATGTCATGGCTAATGTAGGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000032425-'7-10,'7-8,9-10=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.092 C2=0.090

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3),PF112193=DUF3014=PD(85.7=83.7)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9)

Main Inclusion Isoform:

ENSMUSP00000125017