MmuEX6078355 @ mm9

Exon Skipping

Gene

ENSMUSG00000035580 | Kcnh8

Description

potassium voltage-gated channel, subfamily H (eag-related), member 8 [Source:MGI Symbol;Acc:MGI:2445160]

Coordinates

chr17:53033240-53044561:+

Coord C1 exon

chr17:53033240-53033439

Coord A exon

chr17:53037779-53038028

Coord C2 exon

chr17:53044326-53044561

Length

250 bp

Sequences

Splice sites

3' ss Seq

CCTGCCCTCTTTCCCACCAGCTT

3' ss Score

10.1

5' ss Seq

TAGGTAGGT

5' ss Score

7.92

Exon sequences

Seq C1 exon

CCCTGATGCATGCCTTAGTATTTGGGAACGTGACTGCCATCATACAGAGAATGTACTCTAGATGGAGCCTGTACCACACTAGAACCAAGGACCTAAAAGACTTCATCCGTGTGCACCACCTGCCCCAGCAACTCAAGCAGAGGATGCTCGAGTACTTTCAGACAACTTGGTCAGTCAACAATGGGATAGATTCAAATGAG

Seq A exon

CTTTTAAAAGACTTTCCAGATGAGCTGCGCTCTGACATCACAATGCATCTGAACAAGGAGATCTTACAGCTGTCCCTGTTCGAATGTGCCAGCCGGGGCTGCCTCAGGTCTCTGTCTCTCCATATTAAAACCTCCTTTTGTGCTCCAGGAGAGTATCTGCTGCGCCAGGGGGATGCTTTGCAGGCCATCTACTTCGTGTGCTCAGGCTCTATGGAAGTTCTTAAAGACAGCATGGTGTTGGCTATTCTAG

Seq C2 exon

GGAAGGGAGATTTAATTGGAGCAAATTTATCAATTAAAGACCAAGTGATCAAGACCAACGCTGATGTGAAGGCGCTGACCTACTGTGATCTACAGTGCATCATCCTGAAAGGTCTCTTTGAGGTGCTGGGCCTTTACCCAGAGTATGCACACAAATTCGTAGAAGACATCCAGCACGACCTCACATACAACCTTCGAGAAGGTCATGAGAGTGATGTAAGTCCCCTTTCCAATTAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000035580-'10-11,'10-9,11-11=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref, Alt. Stop)

No structure available

Features