MmuEX6083407 @ mm9

Exon Skipping

Gene

ENSMUSG00000018581 | Dnahc11

Description

dynein, axonemal, heavy chain 11 [Source:MGI Symbol;Acc:MGI:1100864]

Coordinates

chr12:119365483-119369584:-

Coord C1 exon

chr12:119369192-119369584

Coord A exon

chr12:119365923-119366255

Coord C2 exon

chr12:119365483-119365734

Length

333 bp

Sequences

Splice sites

3' ss Seq

CTCTATTGCTTTGTGTTTAGGAG

3' ss Score

7.26

5' ss Seq

CAGGTAATC

5' ss Score

6.99

Exon sequences

Seq C1 exon

TACATTGGGAATCTTGAGCTCCTTGTACAAGGCTACAATAAGCTGAAACAGACCCTTCTGGAAGTGGAATACCCTCTCATTGAGGATGAGCTTGGAGCCATTGATGAGCAGCTCAGGGTGGCTGCAACCTGGCTGACATGGCAAGATGACTTCTGGGTCTACATGGAGAGGGTGCAGGTGGCCACTGCTGAGCTAGAGTGCAGAGTGTCACAGACTCAGAGCAACATGCTAACAATCCAGCAAACCATGCAGGCCTGGGCTGAGTGGCCACTGCTGCCCCGGAGGGAGACCAGAAGAGAGGCTGCCTTGACCTTGGACGACAAGGGGGATCTGTTTGCAAAAAAGTACAAGCTGATCCGAGAAGATGGTTGCAAGATACACAACTTGGTAGAG

Seq A exon

GAGAACCGGAAGCTCTTCAGAGCTGATCCTTCCCTGGATTCCTGGAAAATTTATGTGGAATTCATTGATGACATTGTGGTGGAAGGCTTTTTTCAGGCCATCTTGCATGACCTGGACTTCTTCCTGAGGAACACAGAGAAACAGTTAAAACCCACACCATTTTTTCAAGCACAAATGCTCTTAATGCCCCCAGAGATTGTGTTCAAGCCTCCTTTAGAAAAAGAGGCTGGGGATGGCTTCTACGATCTGGTGGAGGAAATGTTGTGTGGCAGCTTCAGAGTGTCTGCCCAGATGGGGCGCGTGGCAGCACACCTGGACATCGCAGACTACCAG

Seq C2 exon

AACGATATGGATAACATGTTAGGCCTGGCGGAGGTCCGGCAGGAGATCATGAATAGAGTTGCTGATGTCATCAACAAAGTCTTAGAGTTCAGAAGTTCTCTGGAGACCTACTCTTACCTCTGGGTGGATGACCGGGTAGAGATTCTAAGGCAGTTTCTCCTGTACGGCCATGCTGTGCCATCTGAGGAAATGGATGCTCCTGCAAGTGAAGACATCCTGCAACCACCAACACTAGAACAATTCAAAGAACAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000018581-'14-14,'14-13,15-14=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features