MmuEX6090284 @ mm9

Exon Skipping

Gene

ENSMUSG00000034247 | Plekhm1

Description

pleckstrin homology domain containing, family M (with RUN domain) member 1 [Source:MGI Symbol;Acc:MGI:2443207]

Coordinates

chr11:103256002-103265224:-

Coord C1 exon

chr11:103265139-103265224

Coord A exon

chr11:103258341-103258588

Coord C2 exon

chr11:103256002-103256628

Length

248 bp

Sequences

Splice sites

3' ss Seq

TTGTGTTTAACACAACTTAGGTC

3' ss Score

4.37

5' ss Seq

CAGGTGAGA

5' ss Score

9.22

Exon sequences

Seq C1 exon

GTGTCATGTGAGTCTCCCTCAGAGCTGCTGCCCGAGTGGAAATGCTCTCAGTGGAGAATGGCCTGGACCCTCGTGCTGCCATCCAG

Seq A exon

GTCATCAAGAAGAAGCTCGTGGGATCCGTGAAGGCTCTGCAGAAACAGCATGTGTCTCTGGACACAGTGGTCACCAGTGAAGATGGAGATGCCAACACCATGTGCAGTGCCCTGGAGGCTGTGTTCATCCACGGCCTGCATGCCAAGCACATCCGCGCCGAGGCTGGCGGCAAAAGGAAGAAGCACACTCACCAGAAGGCTCTGCCTCAGCCTGTCTTCTGGCCCCTTCTGAAAGCCATCACCCACAG

Seq C2 exon

ACACATTGTCTCAGATTTGGAGCACCTGGTCTTCATCAACACAGATGTAGGCCGTTGCCGAGCCTGGCTGCGGTTGGCCCTCAATGACGGTCTGATGGAGTGCTATCTGAAACTGCTCCTGCAGGAACCTGCACGGTTGTGCGAGTACTATCAGCCCACAGCCCTGCTTCGAGATGCCGAGGAGGCTGAGTTCCTCCTGAGCTTCCTGCAAGGACTAACATCCTTGTCCTTCGAACTCTCCTACAAGTCAGCCATCTTAAATGAATGGACACTCACCCCATTGTCGCTCTCTGGGCTTTGCCCCCTCTCTGAACTCGACCCTCTCACTACCTCTGGTGCAGAACTACAGCGGAAAGAGTCTCTGGATTCAATTTCCCATTCCTCGGGCTCTGAGGACATCGAAGTCCAACACTCAGGCCATAAGATCCGCAGGAACAGGAAGCTCACTGCCTCTTCCCTCAGCCTGGACACAGCCAGTTCATCCCAGCTGTCCTGCAGCC

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000034247-'3-3,'3-1,4-3=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features