MmuEX6093966 @ mm9

Exon Skipping

Gene

ENSMUSG00000028364 | Tnc

Description

tenascin C [Source:MGI Symbol;Acc:MGI:101922]

Coordinates

chr4:63620819-63625793:-

Coord C1 exon

chr4:63625632-63625793

Coord A exon

chr4:63623021-63623184

Coord C2 exon

chr4:63620819-63621577

Length

164 bp

Sequences

Splice sites

3' ss Seq

TCCCTTTTATTCTCAATAAGGTG

3' ss Score

6.52

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

GACTGGATAACCTGAGCAAAATCACAGCCCAAGGGCAGTATGAGCTCCGGGTGGACCTACAAGACCATGGGGAGTCTGCCTATGCTGTGTACGACAGATTCAGTGTTGGAGATGCCAAGAGTCGCTACAAGCTGAAGGTAGAAGGATACAGTGGAACAGCAG

Seq A exon

GTGACTCCATGAACTATCACAATGGTAGATCCTTCTCCACCTATGACAAGGACACAGACTCAGCCATCACCAACTGTGCCCTGTCCTACAAAGGAGCTTTCTGGTATAAGAACTGTCATCGTGTCAACCTGATGGGCAGATATGGGGACAATAACCACAGTCAG

Seq C2 exon

GGCGTTAACTGGTTCCATTGGAAGGGCCATGAGTACTCAATCCAGTTTGCTGAGATGAAACTGAGACCCAGCAACTTCCGAAATCTGGAAGGCAGGCGTAAGCGGGCATAAATTCCAGGGATAATTTGGTGAGAGAGGAATGGGGCCCAGAGAAAAGAAAGGATTTTTACCAAAGCATCAACACAACCAGTCTAACAGTGAAGCTCTCCTTGGGCATTTGATGGGCGTCCAAGCAGACCACACGGATCACTGAGGCACTGATGTAGGCCCCTCTGCAACGACTTCCTTTGCACCAAAGACAACAGTCTACAAGTTTCTACTTTCTTGTTTGATTGAGCAAAGTCTCCTAGTGACAGCAACACCATGAATTTTACTTCTCTTGGGTGGTTCTGGGAATGGGAGAGGGGCAAGCTGGCCATACAGGGGACATGGTCATTCTCCGAGCCAGCTGTGTTTTACACAAAGCTGTACAATTGTTATTGGTTGAGGTCACAAAGATG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000028364-'26-27,'26-26,27-27=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref, Alt. Stop)

No structure available

Features