MmuEX6094421 @ mm9

Exon Skipping

Gene

ENSMUSG00000028571 | Cyp2j13

Description

cytochrome P450, family 2, subfamily j, polypeptide 13 [Source:MGI Symbol;Acc:MGI:2385197]

Coordinates

chr4:95709351-95725816:-

Coord C1 exon

chr4:95725675-95725816

Coord A exon

chr4:95723464-95723651

Coord C2 exon

chr4:95709351-95712319

Length

188 bp

Sequences

Splice sites

3' ss Seq

AGACTCCCATTTCCTTGAAGAAA

3' ss Score

4.09

5' ss Seq

AAGGTAAGG

5' ss Score

10.51

Exon sequences

Seq C1 exon

TACCCAGGCAAGACTACTACAAGTTTCAATGAAGAAAACCTTATCTGCAGCACTCTGGACCTCTTCCTTGCTGGAACAGAGACAACATCCTCAACACTACGATGGGCTCTGCTCTACATGGCCCTATACCCAGAAGTCCAAG

Seq A exon

AAAATGTACAGGCTGAAATTGACCGAGTGATTGGCCAGTCGAAGCATCCCAGCCTGGCTGACAGAGACTCCATGCCCTACACCAATGCTGTTGTCCATGAAATTCTGAGAATGGGCAATAGTGTCCCTCTGAATATTCCCAGGGAAGTGGCAGTTGACACTACACTGGCTGGATTTCACTTGCCAAAG

Seq C2 exon

GAAAGCGAGCTTGCCTCGGAGAACAATTGGCCAGGTCTGAGCTCTTTATTTTCTTCACTGCCCTTGTGCAAAAATTTACCTTCAAGCCACCAGCCAATGAGAACCTGAGTCTGAAGTTCAGATTAGGCATCACCATTTCCCCAGTCAGCTACCGCATCGGTGCTGTCCCTAGACAATGATGCTGGAGAAGAAAAGGAGAGCAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGGGGAAAGTTGGAAGGAATTAGACTAAGGTCAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAATCACTTACATGCTCAATGATAAATCTTTTCATCTACAACTGCAAAGAGAACTGTGGTTCCTCCTTGTAAAAAGTGCTTGTAAGCAGGAAATGATGGTATACCAACCGCATAGAAATCACTGTTATATCATAGAATTATACCTTCAGT

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000028571-'5-9,'5-6,6-9=AN

Average complexity

A_C2

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features