MmuEX6099038 @ mm9

Exon Skipping

Gene

ENSMUSG00000026718 | Stam

Description

signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 [Source:MGI Symbol;Acc:MGI:1329014]

Coordinates

chr2:14060583-14069965:+

Coord C1 exon

chr2:14060583-14060736

Coord A exon

chr2:14063329-14063504

Coord C2 exon

chr2:14067846-14069965

Length

176 bp

Sequences

Splice sites

3' ss Seq

TTCCGTATCATCTCTTATAGGTA

3' ss Score

9.13

5' ss Seq

GAAGTAATT

5' ss Score

3.7

Exon sequences

Seq C1 exon

AAAACATTCAGAACTGTCAGAACTAAACGTGAAGGTGATGGAAGCTCTCTCACTGTATACGAAGTTAATGAATGAAGACCCAATGTACTCTATGTATGCAAAATTACAGAGTCAGCAGTACTATCTGCAGTCGTCGGCTGTCTCTGCTTCCCAG

Seq A exon

GTATATCCAGGGCCTGCGCAGAGCGGTACCTACCTGGTTGCAGGGAGTGCACAGATGACCCATCTGCAGAGCTACAGCCTTCCCCCAGAGCAGCTGTCTTCTATCAGCCAAGGAGCAGTTCCATCCTCTGCAAATCAAGCTCTTCCTAGTCAGCAGACCCAGGCTTCTTACCCGAA

Seq C2 exon

TGCAATGGTTAGTTCTGTTCAAGGAAATTCGTATCCTAGCCAGGCTTCAATATATAGTCCTCCTGCTGCTGCTGCTGCTGCCGCTGCTGCTGCTGTAGTACCTGTTCCTGTACCTGCTGATGTCACCATATACCAGAATGCAGGACCTACTATGTCCCAGGTGCCAAACTATACTTTAACATCATCAACCCTGCCTCAAACAGGAGGCAGCCAACAGCCACCTCAGCCACAGCAAGCATATTCTCAGAAGGCTCTGCTATAGGACTTGATGTTCCTCTTGGTGGCATATTTCCGCTGAATGCCATTGACAATGTTAGGAGATTCATTAACATCCTAAAATTTGCTTTTCCTCAGCTTATAAGAGTCTATCTTGGTCAAGTTCAAATACTCAAGAAGGTAGAACTGTCTTCAATTTGCACTGAATTTTTAGAGGAATGCCTCTACCCTGAGGAATGAAACTACTTACAACATTTATTTCCTTTCATAATATGAAGAATTGT

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000026718-'22-24,'22-23,24-24=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref, Alt. Stop)

No structure available

Features