MmuEX6099644 @ mm9

Exon Skipping

Gene

ENSMUSG00000036401 | Glt6d1

Description

glycosyltransferase 6 domain containing 1 [Source:MGI Symbol;Acc:MGI:1918353]

Coordinates

chr2:25649379-25651122:-

Coord C1 exon

chr2:25650931-25651122

Coord A exon

chr2:25650664-25650801

Coord C2 exon

chr2:25649379-25650246

Length

138 bp

Sequences

Splice sites

3' ss Seq

CTGCATTTGTGTGTCCCTAGGAG

3' ss Score

10.41

5' ss Seq

CAGGTAGAT

5' ss Score

7.25

Exon sequences

Seq C1 exon

CTGTAATCAGAGCTCAGGAGGAAGAGAACACACAGTCTGAGGCTCGACTGACTTTGCCAGCTCAGCCACTCACTAGTTGTGTGCCCACATGAAGAACAAGAAGAAAGCTAGCAGTCATCTGGGGACGGGCATTGCCAGGGTCATGTGAGCAAGTGAGGGCTCCGCACATCTGACTGCTCAGTGCCATCTCAG

Seq A exon

GAGACGCCTGGATGTCATCACGACCACAGACTGGCTGGCCCCCATCATATGGGAAGGCACCTTTGACAGAAAGGTCCTGGAGACATATTTCAGGAAGCAGAACATCACCGTGGGTTTGGCTGTGTTTGCTGTTGGCAG

Seq C2 exon

TCTCACTGACAAGTACCTGGACCCATTCTTGCAATCAGCCAGCAAGTTCTTCATGCCTGGCTATCGAGTGATCTTCTACATCATGGTGGATAAGTACCTGCAGCTACAAGAAATGGAGCACAACCCTCTGCAATCCTTTCAAGTACTCAAAATAGGCAAGGAGAGGTGGTGGAGCAACTTTGACCTCATGCGCATGAAAATCTTGTCTGAGCACATCCGGGATCACATCAGATATGAAGTGGATTTCCTCTTCAGCATGAACATCAACATGGTCTTCCAAAGTGAGTTTGGGGTAGAGACTCTGAGCACATCTGTGGCTCAGCTCCATCCTTGGTGGTATTTCCGAAAGAGGACGAATCTACCCTATGAGAGGAAACCTACATCAGTAGCCCACATTCCCTTTGGACTGGGGGACTTCTACTATGCTGGTGCCATTATAGGTGGAGTGCCCTTTCAGGTCTTGGACTTTGCTCAGCAATACTTGAAAGGTGTTTTCTTGG

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000036401-'3-4,'3-3,5-4=AN

Average complexity

A_C2

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features