MmuEX6102189 @ mm9
Exon Skipping
Gene
ENSMUSG00000041762 | Gpr155
Description
G protein-coupled receptor 155 [Source:MGI Symbol;Acc:MGI:1915776]
Coordinates
chr2:73206371-73209187:-
Coord C1 exon
chr2:73209022-73209187
Coord A exon
chr2:73208043-73208198
Coord C2 exon
chr2:73206371-73206454
Length
156 bp
Sequences
Splice sites
3' ss Seq
ATTTGATCTCATTTTTGCAGATA
3' ss Score
9.51
5' ss Seq
TTGGTAAGT
5' ss Score
10.47
Exon sequences
Seq C1 exon
CCTGGTGCTGCCCCTCCTGTGCAGAGAAATGGTGGAACTCCTGGACAAGGGGGACAGCGTAGTGAACCATACAAGCCTGTCCAACTATGCGTTTCTATATGGTGTCTTCCCTGTGGCTCCAGGAGTGGCTATCTTTGCAACACAGTTCAACATGGAAGTGGAGATT
Seq A exon
ATAACCTCAGGCATGGTAATAAGTACATTTGTGTCTGCTCCAATCATGTATGTTTCTGCCTGGTTATTAACCTTTCCTACCATGGATGCCAAGCCACTGGCGTATGCCATTCAGAATGTTAGCTTTGATATAAGTATTATCAGCCTGGTCTCCTTG
Seq C2 exon
ATCTGGTCCCTGTCTATTCTTCTCTTGAGTAAGAAATATAAGCAGCTCCCACATATGCTCACAGCGAACTTACTCATCGCTCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000041762-'8-8,'8-6,9-8=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Primers PCR
Suggestions for RT-PCR validation
F:
CTGGTGCTGCCCCTCCTG
R:
ATGAGTAAGTTCGCTGTGAGCA
Band lengths:
242-398
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
Other AS DBs: