MmuINT0015017 @ mm9
Intron Retention
Gene
ENSMUSG00000033544 | Angptl1
Description
angiopoietin-like 1 [Source:MGI Symbol;Acc:MGI:1919963]
Coordinates
chr1:158774711-158787407:+
Coord C1 exon
chr1:158774711-158775556
Coord A exon
chr1:158775557-158787213
Coord C2 exon
chr1:158787214-158787407
Length
11657 bp
Sequences
Splice sites
5' ss Seq
AAGGTGAGT
5' ss Score
10.47
3' ss Seq
AATCAATATTTAAATTACAGGAC
3' ss Score
5.66
Exon sequences
Seq C1 exon
ACGCTGTGGTAGAATTTCATTTCAAAATGAAGGCTTTTGTTTGGACCCTAAGTGTACTACTCTTCCTACTGGGCAGTGGTCATTGCAAAGGAGGACAACTCAAAATAAAAAAAATAACCCAAAGGAGATATCCCCGTGCTACTGATGGGAAAGAGGAAGCAAAGAAATGTTCATATACATTCTTGGTACCTGAACAAAAAATAACAGGGCCAATCTGTGTCAACACCAAAGGTCAGGATGCAGGCACTATTAAGGACATGATCACCAGGATGGACCTGGAGAACCTCAAGGATGTGCTGTCTAGGCAGAAGCGGGAGATAGATGTCCTGCAGCTGGTGGTAGATGTGGACGGGAACATTGTAAACGAGGTGAAGCTGCTGAGAAAGGAAAGCCGGAACATGAACTCCAGAGTCACGCAGCTCTACATGCAGCTACTACATGAGATCATCCGTAAAAGAGACAATTCACTCGAACTTTCCCAGCTGGAAAACAAAATCCTCAATGTCACCACAGAAATGCTGAAGATGGCAACAAGGTACAGGGAGCTAGAGGTGAAGTATGCGTCCTTGACGGATCTTGTCAATAACCAGTCTGTGACGATCACTGTATTGGAAGAGCAGTGCCTGAGGATGTTTTCCCGACAAGACCCCCACGCGTCTCCCCCTCTTGTCCAGGTGGTACCGCGACACAGTCCTAACAGCCACCAGTACACCCCTGGTCTGCTGGGAGGCAATGAGATACAGAGGGACCCAGGTTACCCCAGAGACGTAATGCCACCACCTGATCTGCCAACAGCTCCCACGAAAAGCCCTTTCAAGATTCCAGCAGTGACTTTCATCAATGAAG
Seq A exon
GTGAGTTACTGCTTCCTGGCCAATGGAAGAACGAAGCTGGTATGCTGATGCTGTATGATTCACGCAACAATACTCTTATCTTAGTAAGTCCTACTTCTTATGTGCTGATGCCATTATACATGTCCAATCAAAATTTTCACTTTTTAAAGTGATGTTTGGATTTGATATAAAACATCTCTTTTCTCCGTGCTATAAGTTTCTAGGTGTTTATAATTTTTCCCCTCTGTGGGAAAAAAAAGCACTCTGCCACCCAAATTCTTACAATGGAGGCTGCTGTCAAAGAGAATGACCACTGACATATAGCTGAAGGAACTCACTCTACACCCCACTTTGCGGCCAGCTCCACCGCAGCCCCACCCTTCAGATTCCCACTGCTTCCTCTGGCCTTCTTGCTGTCTTCAAAAGGAGTATTTAACCTTGTGCTCTCCTTGTCCTCAGGCCTGCAGTCGTCTGTCCTTATCTCCACTCAGGGTGTGCTTCCTACACTGCTCTAAGTCTCATCAGGTCCTGGGTTCTTGTTCTTTCAAACTTCAAAACACCTATATAAAACCTACCTTTGCTACCTCAAGAGAAAAGGGGAGTCTTGTCTTCCAAGGCTAAATGATACTGAGCACCCTGCCTTCCTCTCACTGCTCTGCTCTGGCCCTGACTCTGGGGTGAGCACCCAGTGCACAACAGAGTCCCGTGTTTCACTTAGAACTGTCACATGTGCATCCGCTGTCCCACAAGCCACTCTCCTGAACCTGTTACATTACTGCTTCCCTACAATGGGGGAGGAGGGACTCAGATGCCCACAAGGAAGATGAAAACTCATTTACATAAGGAAAGGCAGGACATAAAAGCTGCACTAGGAAGCCACCGCACGCATGAGGCTGTCTGCAGCAATGGCATCCACTGACACATGTGTCCTTGCGCCTGGCTTCCACAGTCACATGAACAAGCTGTCTTCCAGACTGTATTTTAGAGCTCCCCCACATCTCAGGATGGCAAGGGTTACCTGCCTGCTGGTGTAGGAGCCGCCTGACTGTGGCAAGGGTTCCTCTACTGAAACAAGTGATCAAGGCTCACCTCAAGGCTTTCAAGACTAATGCTAAGACTTCCAAGAATCAAACAGACAATACTGAACTTCTCTTTTTCCACATCCTAGGCTCTTTCTTTCCCTCTTTTCTCTGCTTTCTGTCTTCTGTACCACACTACACTGGAGTTACTGAGATCCATTTGTTTGCCTTCCTGTGGGACCAGGTTTGGCATACTGTGCTCATCGTATGTGAAGAATAAGTAAGCAAGTCCTAAAACAATCATCTTCTCACCAACACTTTCCTACAGAAGCAATTATAATGACAAGAATAACGCAGGCTTGGGTGGTGCATTCCTCTAACTACAGCATGGGCTGAGAGGCGGTGCAGAGTTCCTAACTCCGAGGTCATTTGGGCTACCAAGAGAAATTGTCTCCAAACAAATACATATTTACTTGACAAAATCTAGAAAATACCAACTATCTTTTAAAAAATGCTCAACAGCCTAAGAAGCAGAAATAAACAGTTAACATTTTATTCATTTCTTTTATCTTCTTATAAACATGGCTATCAATATTTGTTTAACCTTTAAAAACCACTTTGTTTTCTGAAGATTATATTCTTAAGACACATTTCTCTGAGTAAAACTGACAGACTTATCTATTTGATCCTCACCTGTCCCATAAGCACAGTCACCTGAATTCTACTCAAGTCCCCTGTAAACATTCAGAGGCAAAACAAACTGGTCATTTAGATCCAGAAGCTGGAGGGGAGGGAGCGGGCGTGGGAGTAACAGTGCTGGGTCCTGGCTCAGAGCTTAGTACAGAAGTGCTGCAGCAGTGCCTGACACATCCTACCCAGATGTCTAAGTGCTTGCTGACTGCTCCCCACAGCCATTCCCTTGCAACACACTCTGCACTGGTACCAGCCTCCTTTGTAAAGCATGCACACACCGTGCTGCTGCTCATCAATTTTGTGCAAGAAAAACCCAAGTGTAGCTGTCCTTTGCTACTTCGTGGTTTCTTCTTTCTTCCACCCTTTCAACCCCCTAACACTAGATAACAGAGAAAAGGGGATAAAGAGGAAAGGAAAGAGATCCCGGAATAAAACCAGGAATTGGAAAGGGGGTGATGTTACCATTAGACCATTTCCTGCTGGTTAGAGATGTCAATTTACTTAGGGCAAGTTTGATCTTAGCTCTCAGGATATCTAATTTCTTCTTGTTGTTGTTTCTTCTTTGTGCACAAGTACTTAACAAACTGCAACCAACAACAACCAATCAGGAACCCCATCTCTTGGGGTCCTAGCATTTATATAACCTCCCCCTAAATTCTAAATGTCACAATCGCAGAAACTATCTACAGCTGGCCAAACCATGATTCTGCTAGAGCAGACCCATAATCCCCACAACTGGGATTAAAATGATAACATTCTCATAATATTTCTGTGTTTTTTAAAAAAACAAAATTCTGGAATTCTCACTACAAGAAAGTCTCATTTTCATTTCACGTGCTTCCTTCAAAAAAATTGTTTCAACAAAACAAATCCACTTTTTCCTTCTAAAACTCTAGTAGGACTTCTGTCCATTCAAATGATAAGGATGAGACCGAACGAATGAGTACATGATGTAAACAGAAGGCCCTCCGTAAGCCCTAGTTGACCTCACAGGCCTGAAGTAGTTGTTTATAATCACAAACACCTCTACTGTCTGTAACACATACATTTATTAAATTATCTCACCTTTACAAGTAACCACAACCCATCTAAGTGAGAGGCATTCTAACACATAAGCTCCTTCCTGCATTTCAACTGCAGGTGCTGAAACATTACATGACTTGATAACACAGAGCCTCTTAGCGTGGTCAACCTAAAGACCTTCATGAAAACAAGTGTTAAGAGCAGCAAGAATATCATAAAATTAGGTCAATCAGCAACTCAAGCCCTTTAATTTTCAAAGACACGTACAAAACTGTCCACTGGACTTAGAAAGGAAAAAAATCTTTCCCATTCATTTCAAACTTACATTTTATTAAGTTTTTAAGACATGATATGATTTATCAGGATAGCAGTTCCTATAATATTTATAGATAAAGATAACTCCTATGTATTTTATTAAGCTACAGTAGGTATAGTTATAGAAGTGTAGAAACAGCTGCTGTTGAGTTTTTAAGTTTAAGTCAGTGGCATCATCAATTTTAGCAGAAATGAAGAAACATATTTATTTATAACAAACAAAGGAAATACTTTACAGAATGAAAACATCAGCTCTAGTTTTTTCACACACTGAGCATCAGTACAAGAAAATGCATACAATTAAATACATCCATACAATTATGCATGCAGGGATACGGCATACCCAAGGCCAAAGTTTATCTCACTTTTACAAGAAACGGTGCACAGAGTAGTCCTAGGAAATCAATTTTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCAATCCCCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTATGTGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCCAGCTCCTCCATTGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTTGATAAAATCTTGCTAGTGTATGCAATGGTGTCCACGTTTGGATGCTGATTATGGGGTGGATCCCTGGATATGGCAGTCTCTACATGGTCCATCCTTTCATCTCAGATCCAAACTTTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATTCTAAGGAGGGGCATAGTGTCCACACTTCAGTCTTCATTCTTCTTGAGTTTCATGAGTTTAGCAAATTGTATCTTATATCTTGGGTATCCTAGGTTAGGGGCTAATATCCACTTATCAGTGAGTACATATTGTGTGAGTTCCTTTGTGAATGTGTTACCTCACTCAGGATGATGCCCTCTAGGTCCATCCATTTGGCTAGGAATTTCATAAATTCATTCTTTTTAATAGCTGAGTAGTACTCCATTGTGTAGATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCAGTTGGGGCATCTTCTGGATATATGCCCAGGAGAGGTATTGCTGGATCCTCCGGTAGTACTATGTCCAATTTTCTGAGGAACCGCCAGACTGATTTTCAGAGTGGTTGTACAAGCCTGCATTCCCACCAACAATGGAGGAGTGTTCCGCTTTCTCCACATCCACGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCAGTTCTGAGCCTCATTTTTTAATGGGGTTATTCGATTTTCTGAAGTCAACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCACTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCGATTCGCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTTTCTTCCACTGAATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTCCATTGGTCTACTTGTCTGTCTCTATACCAGTACCATGCAGTTTTTATCACAATTGCTCTGTAGTAAAGCTTTAGGTCAGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGACTTTTTGCAGTCCTAGGTTTTTTGTTATTCCAGATGAATTGGAAATCAATTTTTAATGTAAAAAATTCAGCCACAGAGATAACTTTCCAATATTATTTTAAGTAAGCATTCCCTTCCATTTTACTCTATAAGCCAAGTGACATAATCAGTTGTATCATAACAAGCAGCCCTCCCTCATGACAGAAACTTGAACAGACCGATGCCTGTAACCTGCTTCCCAGTGCTAACACGCTGATTCCTAACAAACAATTCCTAAAACAATTAATAAGCCTACTGTTTTATCTCTTTACATAGTAGCTTAAAACAATTTTTGCAACTCTAGGGGAAGTGTCTCACACTGGAGACTTTCAAGGAAAGAACAACATAAATGGGTACTGTGCTTACATGTCGTGTGACATAGGTGGCTACTGTACTTACACACGCTCTGACAGATGCTGCTGCTGTGCATACACACACTCTGACGTAGGTGGTTACTGCGCTCATCCATGCTCTAGCACCAAGTGACTCACTGTAGTGTGGTACACATAGGTAGCCATGCTAGAGTCTCTATATGCATGACAGAAGACACACAATCCATTCTACCTAAAAATTAGTAAGCTGGAGTCAAAAGCCGGCACAAAAACTATGACTCCACTTAGGTGAGATACAGGGAGAGTCAAATTCACCCATGGAATCTAGTTTTCTGCTTTGAGAAGAATTAAAATGTGTATCATGGGAGATGAATGAATCCTATTTCAAGATTACTGCATCCAAGAAGAGGGTCTGCATTCAAGATAAATATGATTATAGAGGAGATACTGCCTGTGTACATTCTTTGAAGCACCAAATTTCTGAACCAGAGGTAAATTTGGATTTTCAAAAATAAAGCTGATAAGTTTCTAATAGTAGTTTTAAAATTTTTTTGTTAAATATGATCCAGAGAAAGAAGTTAGTTTCTGTTTAAAAAAAAACAAAACAAAACAAAACAAAACTATCATCTAATTCTAGAGCAAAAAATTTAAAAGGAATGAAAGTAACAATAAGAAAATGTTTCTGCCAAGATCAATGAGCTGATGGTATAATTATAAAACCCAGTAACTGAGCTCTGATAGTTACTGTCTTTTCTAAAGAGGAGAGAAGGCACTGTCAAGTTTATCTGTCTTCCACAAAATAATTTGAACTAAAATTTCCTGAGGTTTTGTAAGCCTCAAAGATCCTGAAATGTAAATACAAGGTCCACTGTCCAAAAGTGGATAAATTAGTGAAGCTGAAGATAAACTTAAATTTGCCTGTATTAGAAGTTTTATCAAATGAAAACTGAACTCAGATAAGCTAGTATTCTTCAATTTATCTAAACACCTAAACACACGTTAAATAGCGGAAAATAAAAACAGTTCTCTGGTATTTAACAAAACCAGGCTAAAACAGAATCTTTACATGGCCTCCAATCTAAACTTTGAGAGCAGGCAGTAAGATCTCAACAAGCAAAGCTTAGTTCCAAATCTCAGACATGGGAGCTACTCGACAGGAGCAGCCCTTGGGTGCAATGCTCACAGAGCCCCTCGTGTGCCATTAGTAGCATCAGGTCTTAAAATAAGAATTTACAATAAAGTAAAATATGCTCCTTAGACACCCTAACTTCCCTAAAAGTAGCGACTCGGGAGCACAATGTAGCTAACTTTAGAGATTCCACCATGACTGTTTTTAAGTAAAACCATCGAGCACATGAGTGAGGCAGTCTCTGGCCCACCTGAGAGGCTATAAACATCATCCTGTCGTTTATATTTCAGACATAGGAAATGTACAACAGCTGTGGAAGACTAAACATACTTCAGCATGTAGCCCACATGTGGCTTAGATGAGGTCCCGAGACTCCCAACGGCCTAACTTGGATTCAGTATGCTGAGCTCAGACAGGAAGACAGCAAGGCCCTGCTCAATCTCAGCTCTCAATTCACACTCTTACCACGAGTTCTGCTTCAAACCTCATTAGAGTGCTTCGCCACGCTGTGTGGGAACCTTTTCTTACCACTTCTCTCATCTCCCACCTAACTTCAGGGTTCTTCATCTGTCTCGGGACCTGAGTCTACCCTGCACTAGATTCAGAAAAGATCATTCTTTTAAATTAAAAAAAAAAAATTGTTCATTTGTATTTAGCCAAAGGTTGACCCTGGGTGTCCTCCTTTTTGAGATAGGAGGGTCTTTCACTAAATTTGAAGTTCCTTGATTTGGGTAAATTGGCTGGGATTTCCTGTCTCTGACCCCTAACCCAGTGCTGACACTACAGACACTGTGTATGCTCGAGTGTCTGGCTCGTGCGAATGCTGGGATCCAGACTCAGTCCTCACACTGTACAGAAGGAAAGTTACAGTCTGAGCCTTCGCTCCACCCTCCAGAAAAGGCTCTTAAATGACAATAGAAACCCAAAGACATTCTGAAAATGACCACCATCAGAAAAGTTAGTATCTGAGGGTCCCCCAATGAGCTCCAACTGTGCACGGCCAACAAAGAAAAGGTCCTGCCTGTGCATTCTGCTTACTTGACATGTATCACATGACACGCAGGGAAGCCGGAGGGTGGGAGCGGGGGCCACTTCATTTTCCTCTCCACTGCTCCTCCACAGGCAACATCACAGCGTTCACCCTACCCGAAATGGAATGATTCTTCTCTGCCTGACAACACATGGTCTACAATGTGAAATTATTCTTATGTGATTAAGGGAAAGAGAAGGGGTGACATCAATATCTGAGGTGTTTCCCTATAGTATTTTGTGGTGCATGGAACACAGCAGAATGTAAAGTATGTTACTGGCTAAAATCAGCTGTTATTTTTAATCTATGAATTTTCACAACATGATCATTCAGTAATGTTTTATTTCTGTGACAGAAATGACTATATCATAACCTTCAACTAGCCGGACTAAACAGCTCAATGAGCATATATGTATTAAGTAAAGATATTTAGTACAGTACTTTTGCACATGAAGGTTAGGGACAAGAGAGGCAAGAGGGACTGACAGTCCCTGGTGACACTGGCTCTGTTAAGCACAGTGTTCACACACAGTCCCAGCGCTTGGATGCTGAGGCACGAGCATCTGGAGACCAAAGTCTGTCTCAAAACAAGGAGAAAGGAAAGAGGAAAAGAATCTCTGAATACTTTGAGAACTCTGGAATCCACTCATGACTTGAAAAGAAAACGCTGAACCAGTTACAGCAAAGAGGGCTGTACTTCCAGCATTTGGGAGACTGAAACAGGGTGACTGTGTTTACAGACAAGCTTGTACTACACCACCAGTCCCAGGTTAACCTGGGCTACAACATGAGATCCCATCTCAAAATGAAAACAACTTTAGCAAACTAGGGAATGCAAAAAACAAGAATTATATATATATATAATTTTTTTTTTAGCAACTATTCTGGAGGCCTTCATAATAGACACAAAACCAAGGAAATCCCAGAAGAGAAAAAAATGAGCCAATGAAACTGAGAGTAAAAAACCCACAATACCTAATATTACCTTTTAAAAAATTGTTTGTTTGTTATTTATTTATTTATTTATTTAATGTATGTGGGTACACTGTAGCTATCTTCAGACTCACCAGAAGAGGGCATCAGATCCCATTACAGATGGTTGTGAGACACCATGTGGTTGCTGGGAATTGAACTCAAGACCTCTGGAAGAGCATTCATTGCTGAGCTATCTCTCCAGCTCTCCTAATGTTATTTTTAAAAGATGCCATTTTCCAGGTTATATTTTTACTAATAATCTATAGTACAGATGGACACTGATAATTTTAAAATTTTGAAAAAGCTATATATGAAATATAAGACTATGGGGTCGAGACTCTGACCCACTCAGTTTGTACATATTGCTTTCCATTTCCTTGGACTTAAAACTAAAGGACTGATTCATTGACTTAACAACCTTGGCTGATGCCCAGTTGAAACATGGAGAGAGACGTGAAGTCAGCAGAGCACGGCGACTCCATCCTCAAGAGGCAATCCAGAAGGAAGAGCTCACATTCCCCAAGTTGCCTCCAATGACAGACACAATGAATGGTGTTTACATAATGAAATTAATTTATCTTAGTAAGAACCAATGGGGACAATACTATGTATTGTTATCTCAAAACTTCAGCAATCTTATTAAAATTATAGAGCAGAAAAAAATCTTAAGAATTCTGACTAAACTAGTTTCAGATACTTAAAAATTACACATCAGAATTTTAAAATATTCAGTAAAAATTTTTGATGAATGCCTTTAAAACTCCCTTGTTCAAATATATCTATATTTAGCATAATTCTTTTTTTCTGAGCCATAATTTTTGTATGCTGTTTAAAATAAAAATTTTGAAGCACTGGTATAGTTATGAAATTTAAGGACGTTCAGTAGAACTAGACAGTTATTTTCTGTAGATCCCACAATGTACCAATCAGACACTACAAATGATTTAACTTCATGGTTTTTTTTTTTTTGTTTTTTTTTTGTTTTTTGTTTGTTTTGTTTCATTTTTTTTTTTTTTTTAGATTTATTTATTATATGTAAGTACACTATAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATCTCATTATGGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACCTTTGGAAGAGCAGTCAGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCGTTTTGTTTCATTTTTAAGAAGTTGAAAAATCTTAGCTGGCTAAAAATATAATGCCCAGGGGTAAGATCTTGCTACCAAACTTGACAGCCCGAGATCAATCCCAGCACCTACCTGATGGATGGATGGATGGATGGATGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAGAGAACCTGCTCCTGCAGGCTGTCTTCTGACTTTTTTGCACAGAATAATAAATTAAAAAATATGGCCTGGTGAATACTATGAAATAAAAGAGCAAACAGTGCGCAGGAGTTCAGAACATTTACCTGGGAGCAGAAGTGAGCATGAAGGAGGGCTTACCACCACCTCACATAACCTTAACTACTACTACCTGTCGCATGACCTTAACTAGCTATTATCTGTGCAACAGAAAAGCTGTCAAGGGTCACTGGGCAGCTCTGATAAGAAGATTACTCTTAGCCATAAGAGAGCCATGATATCATGCATGAGATCAGCCAGTATCTTAGGGAGACATTTAGACCAACATTCCTACATTTTTCTAGTATTAAGACAGGGTCTCCACTGAAGCCAGGCTGGCCTGGAACTCACTACGTACCCCAAGCTGACCTTGTACTTGTAGTAATCATCTGTCCTTAGCTTCTGAGTTCTGGGATTAAAAGTGTGTGGTGGAACACCTGGCCTGACACGCATTCTTTACGAATATGAGGGAAAGTTCAAATTATTTAAATTTGGGGGGTTCTACTTTCTTTTCTTTTTTAAGGGTTTATTTGTTATGTATACAATGTTCTGTATGCATGTATGCCTGCACACCAGAAGAGGACACCAAATCCCATTACAGATGGCTGTGAGCCACATGTGGTTGCTGGGAATTTGAACTCAGAACCTTTGGAAGGGCAGTCGGTGCTCTTAAACTCTGAGCCATCTCTCCAGCCCTCTACTTTCTTTATTTCTAGAGCTTCTTAGCAATTAATGAGTGAGTGAATGAATACGACCGAGTTACCAAAAGGGAACACAATGCTTAATACTGTCAGAACTTACCAGGCTGCTGCTCCACTTCCAATGAACATACCAACTTTGTATGTTCCCTCGAAATAAAAGTTCAGACACTATAAGTCTGGCACCAGGAAAACACGTATGTAAATGCCAGCAGGTCAATCCCACAGCATTTTGCAAAAATGTATGAAGAAAGTAAAGCTTGTAAGAATGAAGGCATTCAGCACAGTGTGTGCTATAGCACAGATCAGAAGAAGAAACCTTAACAAGACAACTGAAGCACCAGGGGCTAACCTGCTGCTAGAATAAATAAAGACCATAGCTTCAGGCAACATTTGTTAAAAAGAATCAATATAATGCATTGCGTTTTAGGAGTGCGTATCTACAGTATACAGAGCAGAGGAGAGTGGGAGATAAAACAAGCTAATGCTTTGAGGAGTTGGCCTGATGTCACCCTTTCCTTTAGCTTTGTATGTATTTTAATTAGTTTCTTCAACTTGTATAGAGCATTATGCACACAGCAGATAAAATGTGGTTATCTGTAAAGAAACAAATGAAGGTAAGAATATTGATTTAAGAATTATTTAGTACTTATCTTTTACATTTCTCAAAAATCAATATTTAAATTACAG
Seq C2 exon
GACCATTCAAAGACTGTCAGCAAGCAAAGGAAGCTGGACACTCAGCCAGTGGAATTTACATGATTAAACCTGAAAACAGCAACGGTCTGATGCAGTTATGGTGTGAGAACAGTTTGGATCCTGGGGGTTGGACTGTTATTCAGAAAAGAACAGATGGCTCTGTCAATTTCTTCAGAAACTGGGAAAATTATAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000033544-Angptl1:NM_028333:2
Average complexity
IR-C
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.201 A=NA C2=0.092
Domain overlap (PFAM):
C1:
PF0014213=Fer4_NifH=WD(100=35.2),PF101464=zf-C4H2=WD(100=60.5)
A:
NA
C2:
PF0014713=Fibrinogen_C=PU(29.3=96.9)
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
Other AS DBs: