MmuINT0045059 @ mm10
Intron Retention
Gene
ENSMUSG00000028571 | Cyp2j13
Description
cytochrome P450, family 2, subfamily j, polypeptide 13 [Source:MGI Symbol;Acc:MGI:2385197]
Coordinates
chr4:96045231-96056960:-
Coord C1 exon
chr4:96056773-96056960
Coord A exon
chr4:96045629-96056772
Coord C2 exon
chr4:96045231-96045628
Length
11144 bp
Sequences
Splice sites
5' ss Seq
AAGGTAAGG
5' ss Score
10.51
3' ss Seq
TTCTGTTTTATTTCCTGTAGGAA
3' ss Score
10.71
Exon sequences
Seq C1 exon
AAAATGTACAGGCTGAAATTGACCGAGTGATTGGCCAGTCGAAGCATCCCAGCCTGGCTGACAGAGACTCCATGCCCTACACCAATGCTGTTGTCCATGAAATTCTGAGAATGGGCAATAGTGTCCCTCTGAATATTCCCAGGGAAGTGGCAGTTGACACTACACTGGCTGGATTTCACTTGCCAAAG
Seq A exon
GTAAGGAGGCTCAGGCATGGGAGTTTTGTGTGTGTCTATTCCATACATTGCCTTGAGTCTTTGTAACTTTCCCTAGCGGTCTGTGGTCATGACCAATTTGACTGCACTGCATATGGACCCTAAAGAATGGGCCACCCCAGACATCTTCAATCCAGAGCACTTTTTGGAGAATGGACAGTTTAAGAAGAGAGAATCTTTTCTGCCATTTTCAATGGGTGAGTTGTGATGCACTGGAGAGAGTTCAGAACTCTATCACATCCCTTCTCTCTCTTCTGGCATTGTTTCAGATAAGCCCGCCCAGTATGACTCCATTTTGTAGTTGGCTTCAGCCCAGCAAGCCCACCCGTACATTGTTAATCCTCTCGTTTCTGAGGAAGAGTTCAGCTTCCCTTGTTAGGTTTTCTACACACTGACAACAGAGACACAATCCCTACCTCTTGTTGACCAAGAAAGCTTGATACCTATCATTGTGTAGATATCTTGAGTGTCACAAGTTCTTTTTAAGTAATGCCTCCTTACAAGGAAGAGAGATGAGTATTAGTAGGTTTTTATTTATTAAATAGTTTTAACTAGCATTTGCTTAAGTGAATGCACTTCAGTCCTATGAACACACTTCAAATAGTTCTGATTTTTTTAAATTGAAACCCCCTTTGTTAAATATAATCAGTTCATTCCCCTATTACATCACCTGACACGCATGAAAGGAAATGCAGTGATAACTCTTGCTCCCTTGTGTTTTCTACCAGGCAAGTTATTGTAGTAGTAGTATTGTGAAATGAGTAACCAAATGTTCTAGCATATTGCAAATATTGGCTTATATATGCTGCGTATATGTCTTCTCAAGTAATTTTGCAATTTCTTGATTCCATAAATATGTTCTAAGCATATATTGTCTGCCAAACATCCAACCTGAGAGCATGAAAGTAACAGGATAGAAGATGAGGCAGCAGTACTCCTTGGACCATGTGTCCCACTCTTAAACGCGTTCTCACGACCGGCCAGGAAGAACACAACAAACCAGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGAGCCAGGAGCGCAAGCCCCAAGCCCCAAAAACGAAAGCCCCCCCAAAACGAAAGCGAAACCCCGTCCCTATTTAGGAGAGTTATCCTTCGCCTAGGACGCATCACTCCCTGATTGGCTGCAGCCCATGGCCGAGTAAAGGCAGAGTACATGTAGTGGAAAATTACTCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGGATGTCAGCGCCATCTTGTGACGGCGAATGTGGGGGCGGCTCCCAACATCTCCCCCTTTCCTTTTAATAAGAGCAATAGGCCACCCATATTAATGAGAGTGGAGATAGAGGTCAAATCCCCAGTGTGCAGGTAAAGGAGCCATGTACAGGATTAGCTCTTAGGCTCACAGGCTTTTACCCAGAGCAACCCTGACCTGCTCCCGTGTCGTTTTGCCTGGAGAGAAGGACACTTGGACACTCAACCTTCTTGAAAGATGACATGTCTCCCTAGAATAGGCTCATATATGCCGCAGAGCCCTTCTACTGCAGTGCTTAGCCGTGCAACTCTCTCGGGCTGCTGAAGCACACTCACTCTATCCCGTGCAATGAGTCTAGCCTCATGGGATGTAAGAGCTGAGTGGCCAGCGACCTATTGCCTAAGCATAGATATATCAGGGGAAGCACCATGTTCTAGAGCTGCAAGTGCCTGGGCAATAACCACCTTGTCTCTCCTAGTTTGGGCCTTAAGCTTACAGACCAATCAAAGAAGCAACACTAATCCACAGCAAAGTGTATCTCCAAATAATATCAATCCCACCCATTCTTTAAAGAAGGGAAATGCTGAGGAGATCCAATTGGGTAATCCTTTGGTCAGGGACAGGTCCAAGCGTGTGGAGTTGACCTGAAGTCTCAATTCCTGAAGGATCTGTTCAAATTTAGCCGTCCAATTCTGTAACATATACTGAAAAAGACTTTTTGACAAATTAGCTGCCCTAGTAAATTTCTCATACTGAATGGAAGTAACACACAATCCCGGAAACTTTTGTTCACATCCCAGCTGAGCTATTTGCCATAATACATCTAGTTGTTTCTGGACAAGATCTATGAGTTGATTAACCAGCATGAGACCACCCTGTATCTTGACATTAGCTGAGGCCTGTTTATCTATGACTGTAGTCACTGAGGCTGACAAAGTGTTAATGGTGTCAGTCGTCTGGACCTGTCCAGACAGAGCCAAGGCTGTCTGAATCAAGGCTAAACCCAGTTCCTAGTTAGTGGTAAAAAAGCAGGGGAATACTTGAGCATTATACATCACCGTCATTAGGAGTGGAAATGTCGACATTATCCCCCAACGCTGCTCTCTCTTTATTATTGACGCCCTGGACATCACCAAGACGAGGGACATCAGTATTCCCTTGGTCAGTCTGGATTTTTCGGGTGAGTCTTTCTGGTATCCAAAATGGGTTGTCTTCATTCTGTGGGAAAACACAGATAGCTCCCCTGGATCTTATCAAAATAGGATCCGGGCCATACCATTTATTATCAAGGACATTTTTCCATTTAACCATCTCATTGGGCCTATCTGGCTCTGAACAATGACGTTCAGCCGCAGTATGGCCATGAACATCAATATTTAAAAAATTGAGTGTAAAGAGTGCCATAGACACAGACACTCTTGGTACTCGGGGTAGAGTCTCCTCAATTCCCCTCTTCTGTTTTATAAGATAGGCTTTGAGGGTGCGATGCGCACGCTCAACAATACCCTGTCCTTGAGGGTTGTATGGAAGTCCAGTCAGGTGGGTCACGTCCATCTGACGGCAGAACTGCTGGAATTTTTGAGACGTATAAGCTGGTCCATTATCAGTCTTAAGGAGTTTGGGTTTCCCCCAAGCACTCCATGCCTCAAGACAATGTTGAATCACATGTGAGGCCTTTTCTCCGGTTAACGGAGAAGCAAACATGATGCCAGAACATGTGTCAATGGACACATGGAGATATTGAAGTTTTCCAAAGGAAGAAACATGTGTAACATCCATTTGCCAGACCTGTAGAGGTCGAATACCGCGTGGGTTAATTCCCACATGAGGAACTGGCAAGAACTCACAGCAGCTTTGACATTGAGTTTCAGCCGTCACATGAAAATTGTTATGAAAATTTCTTGTAGCCTCTACCGGGGATGATAGGGCAGCAGCCACCACTTTAGTGGCCTTATCTGCCAAATCATTTCCCAGAGCCATGGGGCCAGGTAGGCCTGAATGGGCTCTAACATGAGTAATATAAACAGGAAATCTTCTAGATAACAAAACTAATTGTATCTGCTGAAAAATATTGGCAACTCTACTGGAAGGCTTAATCACTCCAGCCACTTCTAAAAGATTTACTGCATTAACCACATAACAGGAATCTGACACAATATTAAGGGGTTCTAAAAAGGTTTTTAAAACTTCTAAAACCACTAAACATTCTACCACTTGAGGTGAATTTTCATTATATTGTTTGGATACCACTTTACCATTAGCCACATAGGCACCTATGCCAGTTTTTGATCCATCAGTATATACCACAATCCCATTTTTAAGTGGGTTTCTTACTGTTATTTGTGGAAACACAACAGATTGATTTTGGGCAAACTGTAAAATTGGATGTTTTGGATAATGGTTATCTATTTGTCCTGAAAAGGAGGTAACTAAAACTGCCCAATCATTAGATGTGGCTGCCAAGGTTTGAACCTGTGCAGCGGTATAAGGTACAATTAAAAGATATGGACTTCGCCCAAAGTGGGTGATTGCTGCTTTTAGGCCTTTAAGGGCAAGCTGTGCAATTGCATCAGGATACCAATCTATTATTTTAGCTGGGGATACGTTTGGATGGATCCACAACAATGGCCCATTCTGCCACAAAACTGCGGTTGGCAATTGTGCTGTCTTAAAGACACACAAACTGAAAGGCTGCGAATCCTCAATACGTTGTAATTGTGCATTCTGTAAGGCTTTTTCCACCTTTTGTAAGGCCTGGTTAGCAGCTAGAGTAAGAGCCCTAGGGGAGGAGATATGAGGATCTCCTTCTAAAATACCAAACAAAGGCCTTAACTCAGCGGAAGGAATCTTTAAAAAAGGTCTGAGCCAATTAATATCTCCCAACAGCTTTTGAAAATCATTTAAGGTATGGAGGTGATCTCTTCTTATCTCTACCTTTTGGGGCACAATCTTATCTGGGGACACCACAGAGCCCAAGAATTGTCCTGTATCAGAAATTTGGACTTTTTCTGTGGCTATCTGTAAACCCCACTGACTTAAAGTTTTAAGTAGAAAAGGATATGCCTTTTGTAGCATGGTAAGGTTTTTATGGCACAGGAGGATGTCATCCATGTAAAGGAGCAAAATTAAAGAGGGGAATTGTTCCCTCACTGGCAAAAGAGCTTCTTGCACATAAAGTTGGCACATAGTAGGACTATTGGACATTCCCTGTGGTAAGACCTTCCATTGATACCTCTTATCAGGTTCCATGTGATTAATAGAGGGGATGGTAAAGGCAAATCTGGGCCTATCCCTTGGACACAAAGGTATAGAAAAGAAACAATCTTTAATATCTATAATAATTAAATTCCAGCCATGTGGTAAGGCGGAAAGTACAGGGAGACCCCTCTGTACTGGGCCAAATAAGTTCATTTGCTCATTAATGGCTCTGAGGTCATGGAGCAGTCTCCACTTTCCTGACTTTTTCTTAATTACAAAAATTGGAGTATTCCAAGGTGAGGTAGAGGGTTCAATATGGCCTAGTTTTAATTGTTCCTCTACCAGTTGAATCACAGCTTCCAGTTTTTCAGAGGATAGGGGCCATTGAGGAACCCACACTGGATCCCCTGTTTTCCATGGTATGGGTCGTGCTGCCCCAATGGCCACTAAGGAAAACCCAGACCCTGTCTGTCTTGGTTTCCATTAGGTGAGATGGGCTCTATCCTTCCCTGTTCTTGATGCCCTAACCCTTTTCCTTCTTTATAACCCATCTTTGCCATGATATTTTTTGCTTTAGCTGAATACCCTCCCGATGGGGCGTTTTCATTGGACAAAATAAGGCCCAAATGCTGCATAATATCCCTTCCCCAGAGGTTAACCGGGAGTGGGAGCACATAAGGTATGAATTTCCCTTGTTGCCCTTCAGAGGATTCCCACGTCAAGGCAATGGAGCTTATAGTGGGACATGATTGATAACCTAGGCCCTGTAATGAATGAGATGACTCTGTGGTGGGCCATGCTTTGGGCCACCAATGTGTAGAAATTATACTTTTATCTGCTCCGGTATCAAGGATGCCTTCAAACTCTTTTCCGTTGATCTTAAGGCGGAGCTTAGGTCTATCATTCAAAGATACAACCAAATAGGCAGAATCATTTCCTGAGGAGCCCATTTTCTTTATCTCAGGTCCTGCAAATTTCTCCCTGGTATTATCAGGGAGGAGCAGCAGCTGAGCTATCCTATCTCCTTTACTAATAGAAAAAACGCCCTTAGGGCTTGAGCACAGGACCTGTATTTCAGGGGAATGTTGACAATCCATAACTCCAGGGTGGACTACTAAGCCCTGCAAGGTGAGTGAACCCCGGCCGAGAATAAGGCCCATGGTTCCCGGGGGCAAGGATGGTATAGGCTCCACTGGCACCGGCTGAATACTCATTTGAGGCATTAATAGGAAGTTGGAGGCGGCACGCAGGTCCACCCTTGTGGGTCTTCCTGGGTCGCCTCTCTGACTGCTTCCTGGGTCCTGACAAACCGGTTCCCATATCTTTGAGGGCCCTGGGACCGAGGGCCCGATGACCCGTTTTTTGGCACATAAGCTGATTGACTATCAGGTGGGGGAAGGATTCTGCCCTTTATATCCCTCACAGAGCGACACTGGTCGGCTCTATGATAACCCTTGCCACACTTAGAGCAAAGAGTGAGAGTCCCTCCCTGTTTATCTGGAGCTCTGCAATCTTTCTTAAGATGCCCAGGCTTTCCACAGTTAAAACATGTCCTCTGATCATTTCTGCCCATGGAGCGGTTTTGGGATTGAAGGATGGCAGCCGCTAAACCTGCATTGCTGAGAGGTCCCCCAAGCTCTCGACAGACCTGAGCCAGTCTTGTAAGCCTTTGTTCTTTCTTGGGGCTATGGCCGCTTGGCACTCCTTTGTGGCTTGCTCATAGATGAGCTGTTCTACCAGAGGTGCGGCTTGCTCTGAGTCTCCAAAAATACGCTCTGCTGCCTCTGTCATTCTGGCCACAAAATCTGAGAAGGACTCCTGAGGTCCCTGGACGATCTTTGTTAATTGCCCAGTGGCTTCACCTGCTCGGGAGAGCGCCTTCCAGGCCCTAATAGCCGTGGAGGAAATTTGGGCATAAGCTCCCCAATGGTAGTTTGTCTGATCAGCAGAATAAGCTCCCGTTAACAAGTCAAAAGTCCAATCTCTCTGCTCTGGAGTCAAAGCAGCTGCATTTGCTCAGGCCTGCGCTTGTGCAGCTTCGTGCCAAAGAGCTCTCCATTCCATATATTTGCCCATACTAGGGAGAGCGGCTTTTACAATCGTTTGCCAGTCGGCAGGAGTTAGTGCCATGCCGGCAAGCCTGTCTAACTGCACCAAGGTAAAATTAGCATTGGTTCCGTATTTACGGACCGACTCGGCAAGTTCTTTAATCTGCACGTATTCTACCGGAGCGTGGACACGCCCACCCTCGGCTCCTTCAAAGACCGGAAATGCCTGTTGTATTTTCCTTTGTTCCTCTCTGGGAATGAATGAGTCTGCGCATTGCCTCTCTGCGCATTGTCTCTCTGCGCATTGTCTCTCTGCGCAGGGCTGACGCACTACGCAGGGCGGGGGCTCCGCATAGGGCGGACCTTGCAGCCGACTGCCCGGAGGCTGAACAGCATGCTGGCTTTCGACAGCCGCTTTTGGCTTTTTTCTTGACCGATTAACTAGCACTTTATCTGGCTGGTAATGAGCTGCTTCTTCCTCCCAGTCTGTTTCTTCAGAGGTGAATTCTTCATCTGCTTCAGAGCTACTAAGAGCTGGCTTCCTGAGCTCATCTAGTGACGAGTATCTCCTAGAGACCTCCGCTAATTGATCTTTTTTCTTTTCTTTTTTCTTTTCCTTCCTTCTAATCTCTCCCCAGGTATTCTTACCTGACCTAAACTTTTCCTTGGGTTCAAGACCCTTGGAAAGGCCTGTATACTTATTCTGTGCACCATATTTCCTCTTTGCTCCTACTCTCTCTCCCCGCTTTACTTCTGATAGATTGTCCTGAATTTCATCTAGAATTTTCAGCCCTATCTTAATCACTTGATAACATGTGAAAAAGAACAAAAGGGCTCCTAACACTAGAAAAAGTTCAAGGCCAAACATACCTTGTAAAGCTATTTTCCACTTTACTTCTGATAGACTGTCTTGACTTTCCTTAGAAAGTTCAAGACCAGACTTACCTTGTAAAGCTGTACTCACTGGTACTCCTGTTCCCCAGCTGAAGAGTTCTGAATTCATGCAGTTGAATCCTTCTCAACAGTCTGTTTTACGGGAACCTTTATTACCGTGACCCGCAGTTCTGGTTCCGGAATGAGGGATCTTCCTTGCGCTGGTGATGGTTAACTCCCGTCCCGAGTTTTCTTGTATTTTCTCGTCCCGGGTTTCAGCACCAACTCTTAAACGCGTTCTCACGACTGGCCAGGAAGAACACAACAAACCAGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGAGCCAGGAGCGCAAGCCCCAAGCCCCAAAAACGAAAGCCCCCCAAAAACGAAAGCGAAACCCCGTCCCTATTTAGGAGAGTTATCCTTCGCCTAGGACGCATCACTCCCTGATTGGCTGCAGCCCATGGCCGAGTAAAGGCAGAGTACATGTAGTGGAAAATTACTCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGGATGTCAGCGCCATCTTGTGACGGCGAATGTGGGGGCGGCTCCCAACATCCCACTGCAGCGTTTCCCGTTGGAATTAGCAGACACAGACTAGCCAAACATGCTACAGCTGGAGCTCAATGTCTACTCTCTCTTATGAGACTATGCAGGGGCCTAGCAAACACAGAAGTGGATACGCACAGTTAGCTATTGGATGGATCACAGGGCCTCCAATGGAAGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACAATATGAACTAACCAGTACCCCCTGGAGCTCCTGTCTCTAGCTGCATACGTATCAGAAGATAGCCTAGTCGACCATCAGTGGAAAGAGAGGCCCATTGGTCGTACAAACTTTATATGAATCAGTATAGGGGAACACCAGGGCCAAGAAGTGGGAGTGGATGGGTAAGGGAGTGGGGTGCGAGGGTATGGGGAGTTTTTGAGATAGCACTGGAAATGTAAATGAAGAAAATACCTAACAAAAAATTTTTAAAAATTAAAAAATGGCAAAACAGTGGGCGAGGCTTATAATTTTACTTGTAGCTTAGTTCTCCGCAGAAATTATAACTTACCATCACACTTGTGGGCACATTCACATTAAGACTCACCAAGGTCATGTTCTCTTTATCAGTTAGATACATAGAACTGCTTGTATAGCAAGCAGTCACAAACTGTATTAGTAAGAACCTGTTACTGCTAACAGATTTCCACATGAGATCAGTGGCTTAGATAATCTTGGCTATCTTGGTTTATATCTTATCCTGAATGTTCATAAGGTTGTGATAACAATCTCTTGAGACATCACAGAAGCAGAGGCCTGATGAGTCCAAGCTAGGAACTGTAACTCCATGACTAGACTCTCTGCTTATTTGGCTTACCTCACAACCAGGTCTTTCATATTATTTCTACATACACTATTATTCCATAGAAAAGAACCAGAAGTTCTAGAAAATAACAAAATTCAGCCCTGGAGAAGGGAAATCTAACTATAAGTCTAGAATATACTGTTATCCAAAAATCAGAAAATGCCAGTATGAATGACCAATATAGCAATGGGTTGCAATAGTTACTGATGTTCATGAGTGATTAAATATAGAGAGGGGTAAGCAGCATTAGAATGTCAACATAGAGCCTGAAGAGATATCTCAGTGGCTAAGAGCACTGGCTGCTCCTCCAGAGGACCCAGGTCTGATTCCTAGTAACCACATGAAAGCTTACCACCATCTATAATCTCAGTCTCAGGGGATCTGACTCCTCCTTCTGGCCTCAGTGGGCATTACACACATGTGGTGCAAAAAAATTTGAAAGAGAAATATCAGTGGAAACAAACAGATGAACAGTGTCAAAATATTTTCACTTATAAAAATTTAAAAAACTATTTAAGGAAAACCAACTCCCAGCAGAGAGGGTAGATGAGAACACAGTGTAACCTAAGTGGCTCCTCCCAACAAGGAAGACGCTCATGGCCCAGTGTGCCCATAAGATAAGGAGATACTTAGAAAAATACCTCTTATAATCCTAAGAAAAGAAAAACTTAAAAGGGTGAGGAATCATCACTGTGTCTGGAAGACCAAAGAGACAGCACAGATAAGCCAAGCATGTGACACCAAGGGTGTCATGCCAACAGCTGGCAAGCCTAGTGGCATCTGTTAACCATCCTATCATAAAAGTTCCAATGTGTAACCAGAATCCTAAGCTAGAAAATGATCTGGAGTGTGAGGTAGCCCCAACAAAGTTTTTTCTGGAAATTAAACTAAATACAATAAAGAGAGATAGTTAATTTTGTATTTCCTCTGATAATGCAGGGAAGAAGAGCGATGTGACATGTCTTCAGGCTGTGGACATGAGTGCTGAGATGATATAAGAAAGTGAAGGAGAATCACGAGTAGTCAGATAACTAAATCTGGCTGATCGTGGGCTCAGTTCTGGTCACACAGAACTGAATTCCTAGTGTTCAGAAAACCGCTGTTTCTAAGGCTGCATTTGGTACTGAGCAAATCTCTAATGCGCGTGCAGGTAGGGCGAAGCAGTCTCCACTTTCTTTGCAGGATAGAGACCTGTCAGAGCAGAGATTCTAGAAGAGAAGCTAAGCAGTTTGTGCTCTATAAGAGGACAGCCCCTGCTTAGGGGACAGAATTACCATGCAAGGCATTGATGCTCCTGGATGTTATAAGGGAAAAACTGAAGACTTCTGGATGCCATTTCGGAACTCTGTGGGAGGATTGCTGACTGTTGTCAATTTGATCCTCTTATCTTGTAATCTTCATCTTTGAAAGGGACAATGACCAGGTTTAGATGTGCACTTATTAAATGATAGGCATGCTTGTCTGTACAGTTAAGCAGGAATGTGACTCCACGTTTAAGACAGGAAACAGATATAAAATGAATGCAGAAAGAATTATTCTGTTTCTAGTTGCCAGGTATGGATTTACCTGGCAGTACAGTTCCAATTAACAAACTAGAACCTTTGCAAGGGCAGCCTCTATGTCCCTGACTTTCTTGTTAGGAACTCATCATTGACACCTGCTTACACTTTGAAATCTTATTTAATGCTCTAAGATATGTTCTACTTTATTTTACATATGTAGATACATGTCTCCGTGTATGCACATACGTGAGCTGTGTTATGGTACCCATGGAGGCTAAAAGTGGGCATTAAATCTCTTAGACCCAGAGTAGCAGGTGTCTGTGAGCCTCCTGAGGAAGGTGCTGAGATTTGAACTCCAGTCCTCTGAGAGAGTAGTAAATAAGCTTAATCATTAGCTATCTCTTCCTTGTAAGGGAAGATATATATATATATATATATATATCATTCAATGATTTTGCAATGCAGCCATTGCATGGAGTATCAGTTACATTTATTAAATGAATTTGAAAAGCCTTGAGTCTAGTCACACATTCTCTCAGACAGCTCAGGCTCCTCCCTTCTATTGTCCCACAAGAAGACATTTGACCTATGATTCTGACGTTCCATATTCAGGGAAACACTCCACATTCAATCACTGTGAGACATAAAGAGCTAGACATACAGCCCAGGGTCCATTCAGGATTTGCAGGATGAAACTCAAAACACCAGTTCCTGCAGGTAGCTGAGAAAGTATTTCATCTTCTGTTTTATTTCCTGTAG
Seq C2 exon
GAAAGCGAGCTTGCCTCGGAGAACAATTGGCCAGGTCTGAGCTCTTTATTTTCTTCACTGCCCTTGTGCAAAAATTTACCTTCAAGCCACCAGCCAATGAGAACCTGAGTCTGAAGTTCAGATTAGGCATCACCATTTCCCCAGTCAGCTACCGCATCGGTGCTGTCCCTAGACAATGATGCTGGAGAAGAAAAGGAGAGCAGAAAGAAGTGAAGAATGCACTGAGTCACTGAGCCACTGCCCATATATGGAGGGCAAGAAGGAAGGTGACGGGGAAAGTTGGAAGGAATTAGACTAAGGTCAGTGGACCTATATTCTGGACTGCTGAGACCTCCAAATTGGTTGTGGATAAATCACTTACATGCTCAATGATAAATCTTTTCATCTACAACTGCAAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000028571:ENSMUST00000107078:6
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.067 A=NA C2=0.178
Domain overlap (PFAM):
C1:
PF0006717=p450=FE(13.6=100)
A:
NA
C2:
PF0006717=p450=PD(1.4=13.9)
Main Inclusion Isoform:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types