MmuINT0085513 @ mm9
Intron Retention
Gene
ENSMUSG00000034402 | Kcnh5
Description
potassium voltage-gated channel, subfamily H (eag-related), member 5 [Source:MGI Symbol;Acc:MGI:3584508]
Coordinates
chr12:76066112-76077710:-
Coord C1 exon
chr12:76077458-76077710
Coord A exon
chr12:76066309-76077457
Coord C2 exon
chr12:76066112-76066308
Length
11149 bp
Sequences
Splice sites
5' ss Seq
TAGGTACTG
5' ss Score
5.9
3' ss Seq
TGTCTTGTCCTGCTTTCTAGGGA
3' ss Score
10.59
Exon sequences
Seq C1 exon
GTCCTCTCCATCTGTCCCAAGGACATGAGAGCTGACATCTGTGTTCATCTGAACCGGAAGGTTTTTAATGAACATCCTGCATTCCGATTGGCCAGCGATGGATGTCTGCGTGCCTTGGCAGTGGAGTTCCAAACCATTCACTGTGCTCCTGGGGACCTGATTTACCATGCTGGAGAGAGTGTGGATGCCCTCTGCTTTGTGGTGTCCGGGTCCTTGGAAGTTATCCAGGATGAGGAGGTGGTGGCCATTTTAG
Seq A exon
GTACTGTGTACCTTCCTGACTCAATGACAAATGGGGCACTGTCCTGGAGTTTTAGCTTCCCAAGTTTCTAAACAGAAATCCCCTCTGTTTGGTGGCTTTAGAAACTCGGTCACTAATGAGATGATGAATTTCAGTGAAAACTGGTCACTGTTTTGGCAAAGAACATTAGTCTCAGTCACAGCTAACAGGGAACATTGGGCGGAGTGACATTCACTTATACAAAAAGTGACCGCAGCCTAAGTGGCTTTGCATACTCTCATTGGTAAGTGGAACCATTGTTGGATGAGTTATAGAGGGAGTTGATTTCAGAGACAACAGATGTATTCAGTTCAGCCTGTTTCTTTACTCAAAAGCCAGGCAAGGCTGGAAAAAAGTATGGAGACTTGCCCAGCTAGTTAGTAACCAGTGAGGGCTGAGTTACTTCAGCCTGCTCCCTACAGTTCTGCCTCATTATGGTGGATGGATGAAGTATAAAGAAGATGGTATTGAGGATGCTAATAAGACTCACAGGAGTGAGCACAATGGGGGGAGATTAAATTTAGGCTTATGGAGGCGGTTCCATCCATCTGTCTTCACAAGCCAGGAAAATTAGTTGGCCAACACTTTATTCTAAAGTTCAGACACTCAGAGGGTAAGGTTACCAATAGCACAACACAAAGGGGTCGATGCTCCATGAACTTGACAAAACAAAACAAAAACCTACAGCTTAATGTACGTGGCAACAGTGTAAGTGAAATATGCATATTTTCGCAAGCAAAATCGCTGAAGGAACGTGGAGATCACTTTCTGCTCCAATGCCCGCAGCAGGTTCTACACAGATAAAACAGAAAGAAAGGAGAGGCCAGGTGACATCACTCCTGAGTTTTTCTCAAGTAAAATACCTTAGGGTCGCACAATGTCAACTCCACTTTGATCACATTTTCCATGCCTTGTGTCTCATTGAAAAATGAGTTCGATCTTTAAGCTATTGGATTTTCTCTTTCTACTGAGGTCATCCCACCATAGCTTGACTGTACTGATTCTCCTAAGAAAAAGACTGATTGGTGGATTTTAGAAACTGCAGAAGCAAAAATGGAAACTGATATGAAATAGAATGCAAAGAGTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGGAAACCTTATTTCAAAAAGTACAGTTATTGGAAAAGACAGAATTTAGAATGGAGAGGAAATGACCTTTTATGAGAAAGCAGTTGCTATAAAAACAGTAGAAAATGGATCAAGGCAGCAAAAAATAAAATAGCATTCTTTGCAAAGCTTTAACTATTTGGAAATTACTTTATTGCTACTGTTAGGTCTCTTGCAGAAATTATTTTTCTTTAAATATTTTTGCAAGGAAACAATAGAGTGCTTGGAATAAGCATCTGGGGTGCTTGCTGCTGCCTTCCTTCCTTTGCTTTTGTCTGTTGGAGTATAACGGAGGCATAATCTTTCATGAAAGCTGTATGTCACTGGAACAGCCCTTTGTGGTAAAATGAATCATAGTTGTGCTATGTCCACTCTTACTTGCTAAAAGAATAAGATAAAACACCCCCCCCCCCAATCAGATGTATTTGTCTTTTACTTAGCCCTTCCTTGTCAGGAGGGGCTGATGGGAAAAACAAGCATCAAATACATGGTATGGGTGCCATTTATTTGGCTTCATTTTCTTCCTTACACTGCACCTTGTAACTCCTCTGACGCCTGGAAAAGCTGTGAGGACAGGGACTCTGGCTTGGGTCTGTTACAATGGAGTCATTTGCTCAGTGAGACAAATGCATTTTCCTTCCATCTGGGAAGGAAATGATGGCTGCCTTTGCCCAATGATACTGTGACTATGAACACAGGGTCCTCGGGGTTCAGGCTGGTTTCTGAGTGTACATTTTTATTCTTTATTCTCCCAAGTCTCAGGACTCAGTTGCTTGCTGTTTGCATCACTTAGTGAGTCAGATTATGTGGACACCTCTCTGACAACCTTCTTCCTTTTATATTTTTAAAATGGGACTTTAAAAGAAACTGCTTCAGCCAAGAGGCTATTAAGAGTACTTTTTTTCTTTTTCTTTTTCTTTTTTCTTTTCTTTTCTCTTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTCTTTTTCTTTTCTTTTCTTTTTTTTTTTTTAACATTTAAGACACCTGAGCAATGCTTCAGGAGAGAAGGAGGATGAGAGGGATGCTAACTAACTCGCCAATGAAACCTGGCATGCAATGACTATCCCTTACTTTCTTGCTCCTTTCTTTTAAAAATTTTATTAGCCTATTTTGAATAATTCTAAATTGGAAGAAATTTAAAAAATTCACCAGGTTGCAAGTAAGCTGTACTCAACCTTCTTTGTCCTTATCCTCCAGTACCCCCCTCCCCTTCCCTCCCTCCTACCTCCATTTCCCTCCCTCTGTCCCCTTCCCTCCCTCTTCTCCCATCTCTTTCTTCTCCCTCCTCTTTTCCTCTCCACTCCTTTTCCCTCCCCCCTTCATACCATTCACTTCTCCCTCTCCTTGTCCCTTGATAAGTCAGATGTTTTCTAAACTTTCTTCAGCAGCCTCACTTTTCTTGTTCAGGACTCATTTGCCAGATGAAAGGTAGCGAATAGAGGTCACTTTAAAATTAATTCAAATCTCTGGATCCAGAAGCAAGTGCAGTCTTATTCTTGACAGGGCACTATTCTTTAGTGTGTCCAAAGTGCCAAGCAGTTTACAGAGTCAGTTCTGAAGCATAACTAATTAGAGGAAAGATTAAAAAAAATAACGCAGTCAACAAATGCCTTTATTTTCACACTGGGGGCTGGATTCAGGATGTGTTCTTTAAATAGGGCATATGAATGTAATCGCAGTTGATGCCTTTTTCCAACTTGAAGTTCTTTACAGTTCTTACACATCCACGCATTTTTTTTTCTTTGACCTTCCCATTTTGTATGAAACACAAAGAATTCCAAATTAAGTTCATGATGCATTCATATTTTATATTCGCTAATGTCTTTTTACTTTTTACTTCCTACTCTATAATTATTTAACTCGAATAGATTTGTTGGTATGGTTGAAATAGCCAGGTTACTTCCAAATGTCTTGACAAGTATATTGTACCTTTCAGAGACTGTTAAAATAGTAGCTTGCTACCAACAATAGGCCTTGCTCCTAAGAGTTGGGACTTGTTTTCTTCACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGCTTGTCGTTCTTGATATTCAGAATCACAGGGTTGGAATCTTAAACTAAGGAAATTGCTGTCTTACGCCTTTCAACTTTAACTTCAAATTCGCAGGAGAACTAGGACTGTGTATGTAGAGGTTGGATGAGGAGTGGGACACTCCTGGAAGCTTGGAAGGAAGTGTAAGGGGGGAAAATGGAAGGGGGACAAACGTAGAACAAGGAGGAGGATGAGCTAGGTCAAGATTTTACTCTACGTGGAATTCACTTTACATGGAATCTTTAAGCATTATGTCTTATAAGCATTTGTGCCTTTCAGGAAAAACATAAACCATTGTTTGCAAATTCAAAATCTGCGCCTTTATTTTCTTCTGAAAGGAAAATCAGATCTGAGATGTGAACAGCTAATTCTTTACTCTTCTGAGACCTGGGAAAATGGGACATTCAGCGGTAGCTATTGTCTTCACTCTACCCTTGCTATAAGAAGGCAAGAGCTTTGTACTGTAAGCTCCTGGAATGTATTATTTTTTCTTTTTCTTTTTCTTTTTCTTTTTTTTCTTTCTCTCCAAATGCTCATGTTTTACATGAGCTGTGAAATATGTAGATTTGAACTGTGTATTATGAAGACAAGTATCTTCAGTGTCAACAAATTCACTCTTTTTATTTCCTTGAAGCATACCTTTGCTGCGTTTTAAATGATGCTGATTTTAATGGTTTAAATGGCATTTATGACATTTTTCATCTAGAGCTCTTAGTATTGCCTCCGAGTGCCTCATGCAGTAAATATCACCAGGGCTGTGAAAGCGTCTGCCTTCTTGGGGGTTTCAAACTCTCTCCCTAGCACTCTTTAAACTAAAGTCTTTTATTGTATCTTGTGTGTGTGTGCATATGTGCACACTTGTGTCTGCATATGTTTCTGCGTGTACATGTGCGTGCATGTATGTGTCTGTTAAAGAGAGAGGACATGAGTATTGCTCTTTGTGTATAATCAGTCAACTTTGGCTTCTGAGACAGCATTTATTATAACCAGCCTTGAACTTGCTGGCCAGCAACTGAGCCTCATGAATCTGTCTGTCTCTACTTCTCCAACTCTTGAAAGTGTGTGGCATAACTTTTTGACTTAGGTGTGTTCTGGAAACTGCAACTCAAGTACTCGTGCTTGCAAAGAGAACATTTTACTGGCTGAGCCCTCTCCCAGATTTCTACTTTGTGTATCTTAATATTATAGTTACGATCAGTAACTATTACTATTGCCCTTACAGTTTTTGTTTAAAGCCCTCACTGCCCCAGTTTGTACCCAGCTTCAAACCTCCATTCTGTATTCTCTGGCACCAGAGTGGCATTGTGTCCATCTCCTTGGGATTTACACCATAGCTTTCCAGCCTTGAGGATTATCTATCACCCCATTATCTGCCTTCCTTATTAGCCTGACTTGGGTCATTCCTTCTCTACCATGCTCTTTTCTGAATTTCAGACACATGCAAAATAAAAATAAAAACAAGTGAATATAGGTAAAAAGGGCTCTATTCTAATTCCCCCATAAACTTTTCATCTTTAAATCTTGTCATCTTCCTTCTTTTCTTCTTTAAAATATTACTTGATGCCACTTAAAGTTTATAAATAGTCATAGTCCATTTAAAAATGTAAATTTGAAAAAAACTAAAATGACTACATTTATGATTATGTCTTCATACTAAAGTTTATGAGCCAACTGTCACTTTTGCTTATAGCGATGGACTGACTAATAAATTAATTATGCAATTCATGCCCAGTATTTCCTTGTTCCCTTTCTGTTTTGTTGATGAAACATCGTCGAATGTGAGGTATTGAAATCTCCTAATGATACTATATTACTGTTTCCTTCTTTATCTCCTGTCAAAGAATATTTCCTTTATATATTTATATACTCCACTTCTACATAGTTTTACAACTGTGATGCAGTCTTCGAAATTGGTCCCTTTATCATTAAGCAGTGACCTTCTTTTTGTCTGGTGATCTCTTTTGATGGCTGTCTCATATTTTCTTACATACTTTTAGCCTGAGTTTGTATATCTTCAAAGATAAAAATGTATCAACTACAGGCAGTATACATTAAATTTTTAAAATCTGACTATATTACATATTCTATTCACCACTAGCCACAACTGGATATTGATTGCATTTAACCCCTTTGTGTCTTTGATTGGATTGCTGCATCTATTCACATTCAACATTCTTAACATTCTTATTGATAGGTGGACAATGGCTACTTTATTACTTGTTTTCTATCTGGTTGTGTCTCCTCTATCCTTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCATTCTCTCCCTCTCTCTCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTCCTTTTCTCTTTCTTTCTTTTGTCTTTATGATTTGGAGAATTTCTGTAGTGCTAAATTTTGATTTCATGCACTTTTTCTTGAGTATCTATTATAATTTTTAAATGGATTTTTGCTAAATAAATACATTTTTAACTCCCCTGGCTCATGAACAAATGTACATGTCCATTATCTGAGATAATAGATAAATATTAATTTGATTTGCTGTGGTTACAATTTACCTACATGTACTTTTGCTGGTTAGTTTTACGATAACTTGGCAAAGGCTAGCGTCATTTTGAGCCGAGAACACCAACTGAGAAATTGTTCCCATGAGATTAGCCTGCAGGCAAGCCTATGGTACATTTTCTTCATTGATGTTGGCTATAGGAGGGCTCAGCTCACTGTGATTGATGCCATCCCTGAGTTGGTAGACCTGGGTACTACAAGAAAGCAGAGTGAGCAATCCATGAAGAACAAGCCAGTCCTCAGAATTCTTCCATGGCCTCTGTATCATCCCCTGCCTCTAAATTCTTGCCCTCAGTTCCTGCCCTGTCTTCCCTCAGTGATGGACTGTGATGTGGAACTATAAGCTGAAATGAACTCTCATCAAATGTGGATGGAACAACTCATCAAATAGAACCATAGTCATGCTCCAAACATACTCAAGAAACTACCTAAGTAAAGTTCAAAGGACCTGTTGGATACATTCATTATCCTCACCAATGAATAACTGTGATGCTTTTTATACATTTTTAAACCTACATCATCAACATGCTAGGTAATGTGTCTAAGGTAATAGAAAACCAAATCCGGCTGTCAAACTAGCCCCATAGCACCACATCCCCCAAGCTGGTTACAGCTGTATTACTCTTTAATCATCTTGCAACTCTACCTCTGTTTTGTCTTTACATTTTACAGTTTCTTACTATGTGGACGTTAAGCACTAATTTCTATTTTCCAATCCAGTTTCCTGTGGTTCAGCAGTGAAATACTTCATAAGGCTTGATGCAAAGAACTGAGAAAATATAAATAGAGCAAACAACAGCTTTCCTGTTAAGTGCGAGGTTCCTTCCTATTTTAGGGCTTTGGGGGAGGCCAGTTTGCTTAAGAGCCGAAATGTTTACCGCAGGGATGACTTGCACCCAGCAGGAACTGACCTAAAAACTGGCATCAGATACTCTGTAGTCATGAAGACAAATGGGAGCTTCTTTGACTGAAAGTGTGTAAAAAACCTTTGCCAGGCAGTAAAGGCTGTGTCTTTATTGGGTACTCCATGCATTTTGCACTATGTACACATTGTGTGATATTTTTCTCAGAATGTGTAAAGTTTGGAAGATGCCTTGAAGAGGAACATTAATGCGTTCTGTCCCACATGGTAAATAAGTCGTTCACTTGCATGAAGACCACTTTCCCACACTTGTAGTAAAAGAGTGCTGTGAATCGAATGATATATTACATGACATGGAGGGTGGACTTATAATTTGAAGTGAATGATAGGACAAATGCTCAGCTTTTATATGACATATACTCAGGGAAATTTTATTTACTTTATTTTCTGAAGATTTTGATGAGGAAGTAGAATTACCCAGATTTGTTAATTTTGTTATATTTCTCTCATAATTTTGAAGGACAAGTAGGAGACAAATTTAGTCATGGGTTAATAGTCTGGTTTCTTATTATCCTTTTTGCATCATAGATATTTTCCCCCAGAATCCCAAAATAATACATGATTTTAGAATGATCATGAAGGACAATGGTAGAGTTCTCAACTAACATGCTTGAGGCCCCAAGTTTGATCCTTAAATTTGAAAAGAAAAAGATCAATTTAAAAACTTCAAAGTAGAAATAGGTTAAGATTTGAATTTTTCAGTTAGGTAAAATAAAATGACTAGTTAATATTTGAATGCCTACATAATTCACAACTGTGTGTTTCGGTAAGAGAAGATTGTACTCATTTATTATCTTTGAACTCCTGAATCTCAACTACCAATCAATGAAAATTTATTGACTTCTTTTAGGACAATATTAGAGTTATCCACATTTGTTAATTCTGCTGAAGTTCTCTAATGTTTTATATTTGTACATGCCTTAAAATTTTACTGTTTATCTATGAATTAGTTTGCTAATTTTTGCTCCTTTTAGTAAATGCTATATATATATATTCATCATATATAATATTGAGAAGTTGCATAATGAAAAACATAATAAACATTATTTAAAACCTTTATTTTTATTACTGAAATGCATTTTCTTTTAGTCGTTTTTTTTTTTTTTTATCCCTTATCTAAATTTGTTTTGATGACAACTTAATCCTAGCAAATTGACTACATATCACGGCAGAATTTGTACAATGCACTTTGGTTCCATCATGAAAACTTTCTTTAAAATGTATATTTTCTGTTAATAATTTTAGTCTTTGTGCCTTAGTTTTATTTTATATACTTCATTATGGATGTTAGAGGCAGTTGCAGATTGTGCTGATTTCATAAAATGAGTTCTCCTTCAGCATCCATGACCACATTAATTCCAGGTACTTACCCGGGTTCCAAGAACCAGAGATGATTTTCCTTTGGATGAAGAGGCCATATGTCCAATTACAGAATTGTTGGTGGCTCCCAAGCTGTGGGTGCCACAATTGCACCCTTTGCATTATTATTGTGACATGTTGGACAATGTTGTAGTTTATAGACTTCATAGATGGGCAGGACCCTTGTCTACTACCTTCCCATGGAGTCTCGCTTGGCATCTTCTGCTGCTACAAAAGCAGGCCCCTGGCCCTACTACAAAGTAAAGAAACAGATGACGCAAAACACCGATAAAAAATGAACAGCAAAGTATCACAATAGACACCAAAGGGATCCAAAGGAATACCTTAAAAGCCCTTACTCTACAAATTTGGAAAGTCTGAAACAAATTAATTTCTAGATCCATTCATGTAATTATTTAATCCATTTTTGATCTCGTAATATAAGATAAACATTTTGTATGTTATTTGTAGAAACTTATTGAAGTCTTTATTTATTGATATTTTATACAATTTTATGTAATTTCTAGTGGTTTTGCATGGATGGTGTTTATTTTTAACTGCCAGGCTGTGACTGATAGCCCTACCCTGTGAGTTACTTGTGATGGGTCTAATAGTTTTATAAATTCCTAGACCTGGGACTACTCAGTCAAATACATTAGCTAATACCACAGTGCCTGAAAATCAGACAGTCGATCATAGTCAGGAATGGTGTAATTGGTAATTTGAGAAAGTATAACAGAAATGAATCTGAAAGAAATATAATCCTTTTCTATCTCTTTAAGGAAGAGTAAGAGTCTAATGATAGTATAGAATATGTTCCTATATTAGAGATTTTAAAAAACCCAGAAAAATCTAAAAGTGGATCAAAATAACCTTAAAAACTTGTTTTAGCATCAGAGACTGTGCTATTATCACTGTTATTGATGTCTTGTCTTTACAAACAATGCATGTACATTTAAAAGAAAGCCATGCATTATCCCTATAGCTCTGAGAGAAACTACCATATTAATGCATTTGTTTCTAAGTTTTATACACATGTATGGGTGATAGGGTAGGAGTGTATGGTCCATAAAATGCTACATTGTATGTATCATTTGATTTTCTGATTTTATAATTTGATTTAATGTGAGCATTTCTGTCTGTCGTTTCATACAATCTATGTTACTTAGTGGCTATCTAGTGTTTCATTATTTATCCCCTGACCTTCATTTTACTACACTTCATTGGACTGTTATAAATATTTGAGCATTTTCACAAGTAAATGTAGCACTTCTGATTATGCAGTTAGAGTAAACACTTTTAATTGGAATTGCTATCTTAAAGAGAATGCCACATAAAGATTTCATATAGGATGTGGTCTTATCATGTAAGTTTCTGCCTTTAGTATCACCAGGCTATCGTAATACTGTATCCCTTGACCATTTAGCTCCTTGGTTTCTCATTTTATTTCTTAGGATGACTGTAGGTATCAAACAACTGAGTCATTAAACAGTGACATCAACTTCAAGGATATTTTAGTGGATTGAAAAACAAATGGATTATTGAAAATGAATTGGGCACCTAACATGATTATTTTATGCCAGTCATGTGATCTGCATGGTGATCTGGTCACCTTCATAATATCTTACATGGTTTCTGCATCTACCATACTGTGCCTGCCTGACCATGAGGGTTGGCCCATCTACTACTCTATTCTAAGAACTACCCAGCTGCCCATTTCAACAAAGAATCTTTGATGTACATCACCAACTTCTCTGTTTCTTTCTCTCATTTCTTTGATTACTTCCGCTTTCCTTTCTAGTGGTGTTATTGTCCTTCGGGGCTTTATGGAACACTTCTTCTTTCCCCTCTTCTGATTTTAATCTGTAAGATGTAAATAGGTATTTGTTCCTCTGTGTGATTAGAATGCATAGAGAACAAGTCATGCATGGAACGCCTCTAGGAAAGCTTATCCCATCAGAGAACATCTCTCCTGTCTTTTCCATTTTAAAACATATTGGCAGAAACAGAACAAAGAGAGCAGATGGCTGAACTTTAGAAGCCAGAGGGCTCATAGAGAACCTTCCTAAGCAGACAGGCCTTTGAGGGTTATTGGCATTTGACATTTCCTCAAGCCCTTTGTCCAACCGGGCACTTCTGATTTGGAATGGTGGATGTTCTCAAGCATCAGTTGATGGTGCTGCTGAAGTGAATAGGTTGTTCTGCAATTGTAGAATCTTAAAGATGCATTTGCATTCAACTCTAGCATGTGGCTTTGATTCCCTGGGATTAAAAGTGTGTGACTCTCTTCGCCTCCGACAGTTCAGTTTCCTGCGCTTAGGAAATCATGGTTGGGGGTCTCTAGAGCTAGACTTGAGACCCTGTCAGGTTTAACTATGTAGAAAGAGAAGGGCCTACTTTGAAGATAGAGATATAACATACTTTAATGTGCTTGGGGAGTAATTCTTAGTTACTGAATAATTCTATTAATGTATATTGCATCAATTATAGATTTATAAAGGCTATAACAACAGCTTCTTGGATATTACATTTTGTTTTGTTGTCAAAAATTTCCTAAAAAACATGAGAAAAAAAGAAGCTATTTTTGCTTTTTCTACTCAGAATGGGAAAAATTAATGTTGCAAAAGTTATTGAAAGTATTTATTAAAATGAGAGTAATGGCTACTCTAACAAATGGCATTTATTTCCCCAACCCTAGGTTTCCATCAACAACTAAAATTTGGGGATGTCCTCATGATGAAAATGTGCTGTGCAATATTACATATATACAGAGGGATTCATGCTTTAAATTATATAGATCAATACTACCTACTAAACAACAACAAAAAAAAACATTAGTGGGTATGGTAGAAACTGTTGTCTTGTCCTGCTTTCTAG
Seq C2 exon
GGAAAGGTGACGTGTTTGGAGACATCTTCTGGAAGGAAACCACCCTTGCTCATGCGTGTGCCAATGTCCGGGCCCTGACTTACTGTGATCTGCACATCATCAAGCGAGAAGCCTTGCTCAAGGTCCTTGACTTCTATACAGCATTTGCAAACTCATTTTCCAGGAACCTCACTCTCACTTGCAATCTAAGGAAGCGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000034402-Kcnh5:NM_172805:9
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0002724=cNMP_binding=PU(45.5=47.1),PF078836=Cupin_2=PU(64.1=48.2)
A:
NA
C2:
PF0002724=cNMP_binding=PD(53.4=71.2),PF078836=Cupin_2=PD(34.4=33.3)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types
Other AS DBs: