GgaINT0054022 @ galGal3
Intron Retention
Gene
ENSGALG00000011858 | KCNH5
Description
NA
Coordinates
chr5:56150758-56164606:+
Coord C1 exon
chr5:56150758-56151010
Coord A exon
chr5:56151011-56164409
Coord C2 exon
chr5:56164410-56164606
Length
13399 bp
Sequences
Splice sites
5' ss Seq
TAGGTACTG
5' ss Score
5.9
3' ss Seq
TTTGTCCTGCTGTTTTTCAGGTA
3' ss Score
11.91
Exon sequences
Seq C1 exon
GTTCTCTCGATTTGCCCAAAGGACATGAGAGCAGATATTTGTGTGCACCTAAACCGAAAAGTTTTTAATGAGCACCCTGCCTTCCGGCTGGCCAGCGATGGCTGCCTGCGAGCCCTGGCCGTGGAGTTTCAGACGATCCATTGCGCCCCGGGGGACCTCATCTATCACGCTGGGGAGAGTGTTGATGCTCTTTGCTTTGTGGTCTCAGGATCCCTAGAAGTCATCCAGGACGACGAGGTGGTGGCTATTTTAG
Seq A exon
GTACTGTGATCTCTACTGACATGGTGGTGCTTGGTATACATTTGACTTCCATGTAGGTTTGAATATTTGCTACTATTGCCTTACACCAGCTGAGACTACAGGAGGTTAGTGGTTGTCATAAGATAAGGATGTTAGTTCTCAAGAGATATCGCTCTAGGAGCAAACCCTTCATCTTTTATTCCATTGAGAATGCTTGTTCTGCCTAGTATGGTTCGCTGGTCACAGTTAACAGCATCCCTAAGCAGAAGAGAATGGCATCTTTTAAACAGTCTGCTGGAGGAAATGCATATTGTTTTATATCTGTCTCTCAAGAGGATTCCACATTAACCTTTGCACTGGGCTTTCCATTTGTCAGTATTCTAGCCAAGAATAATGCCTTCAAACAGTATCTTCGAGGAAGCAAAATTGTTTTTAGTGAAGTGGTTCTACAAAAAAGAAACAGTTCGGTCTGTCTGTGTGAAGAGATAGGGATGCACCATATATTCCAATTTGATTAATGTGAATTCTGAGTACTGGGGGAGTGTCTCGCTCCAATTTATAGGAGGGGGAGGAGGTTCTTTGAAATATGTATGCCCGGCGTGAGATTAAGAAACAGCGGTTCAAATGTTGGTCCGACCAGTTTATTACAAATGTTAATAAGGGAGATGGGGAAAGGGGAGGACGGACGCTATTAAGGATTGGGGTGATGGGGAAGGGAAGGCGAGCGATAGAAATGATAGAAAGAGGCAAGAATTGCGTAAAGCGGGGATAGTCACCACCAGGATCCGGCAGCAGTCCCGTTGCACGACGTTCCGACGGTCCGAGGCCGAAGGGCAGGAGCAGCGAGGCCGGTCTTGGGCAACGAGAGGGTGCAGGTCGGGGAGGAAGCAGCAGGTCTCAGGTAGCAGGCCCAGGGAAGTCCGTCAGCAAACGGTCCGTAGAGGAGGATCGGAAGGCAGGAAGCTCGTGTCGTGGTGAGAGATCAGTCTCCACGTAGAGATCCGTCTACACGTTGCGGTGAGAGATCAGTTGGCAGAGAGAACCCCTCAAGTCTGTCGTGGTGAGAGATAAGCCTCTCCCGTTGCCGTGGTTGTGGTGAAGGATCAGCTTCCACCGTTGTGGTTATTGGACCCTCTTTTATCCTCCATTTTCTGCTGCCTACGTGACATTCCTGGGGGCTTGAGCAAGAGTCCGGTGCATACCTCCTGAGATGGCCATTTTCCTTGAGATAAGTCCACACAAAAAGACCGTTTCCCGGCCATTAGCGGCAGCTTATCTCTCTCTCGATGCCCCTGGCCTTGTCCATCTGTGCTCCTTAAAGGATTTCACAACCCTTAGCCAGGACCTGTCCATCAGTGTCCTCAAGACAAAAGATTCCTCTGCCTTTGCCCAGGACTTGCCTGGACTTGTTCCTCAGCAAACTTTGAGTCAATAAGAGAAAAGAATAGTCTCTTACACCACCCCGTGACTCAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGAGGGGGGGGGGGAAGGCATCAGTCTCCCTTGAGCTTTTGTTCTGGCCTGCAGTTAAATAATTTCTATAATATGAGTGTGGGTAATCCATTCATCAAATGTCGTGGAATACCTTTTCTCCAGCCCAGAGTCCAAAGTCCATTGCGTTTATGATCAATGCATTGTGTCCCCGTTTTTACTGGGGATGAAACCTTTTTGGTTTCATTAAGTTTTGAGCTAGATGGCCTGGAGGTAAGGTTGGCTACTGCAAGCCTTACTCCTCTTGGCTCAAATTTACTGGAGGTAGAAACCACCGGCCCATATTTTCTTCTGTAGTTAATTAATTTTTGGGCAACCTCTCCCCAAGTCCACACTTTAGATCCTGACTGGTGGTTAGGAGTTACAGATCCCTCCAACGCTGCCCAGGTTCTCTCTCCCTGAGACATGGCTTGTATCTTTCCTTGGAGTTGTATACCTATAGGTTTTAACGATTCAGGAAGTCCCCTGATTAGAGGTGTCAGTCTCTCCGGATTAACAGGTAACATCATGGGTGATTCATGATGTAGCTGCAACTTTCTATCATACATCATTTGGAGACAAGCAGCTTTCTGAACATTCTCCACTAACTGGTCGATTGTTCCGGTAATAGCAAGAGGGTCCCCCCTTTCTAAAGGGTTGAGACCCCCTGCCCAATAGGCAGCCCTCTGTGTTAAGGACCAGGGAGCACGATTATTGCCAGTGGTTAAAAATACTCCTGGTCCCCAATAACCTTCAGCTTCTTTCTCTGTTAGTAGGATCTGGTCTCCGCCAGTGAGACTAACTCTCCAGACGTATTCTGTTTCAGACTCCTTTGGGGAGCGGCTGAAATCCTTTTTCAGTGTGGCCAGTTCAGTGGCCGAAAAGGGAATTTCCTTAACATTCAATTGAGGATCTAGATCCTCACTGTTATCGAAAGTATATTCAGTTTTTATCAAAGGACGAATGTGTGCTGGAGAGGCCTCTAATTTATCTAGCCTTTCCTTCACCTCTTGTAATTTCCCTTGAGGATAAACTTTTTCTTGAGGTGCACTGTGAGCAACAGTGTCACCGGTGTCCTTACACGTTATCAGCTCCTTAAAAGCTGTTTGCAACAGAACCGAATTATGTTTTTCTCTTTCTAATTGATCCTCAAGACTCGTTATTTGGCTTTGCAGAGATTTTACCAATTCTTGCGTCACTTTAACCGATTCCTGTAATGCTTGAATAGTCTGGGTTTCCGTAGAGTTCTTTTCCTCTCGGAACTCCACAGCTGCTTTTAAAGCAGCACCGAGTACTGCACAAATAAAAGATTTCCCTTTTCCGGCCCGAGTACGAGCCTCATTTTGTAAAACACGAATACGGTCTGAAACACTTTGCAAATTATACCAGTTCTGTCGTGCCCAATCCACCCCTGATACAGAAGGCCGAGCACCATGCTTTTCTAAAAGATCAAATAATACATCTTCACTTTTCATACTGGCCATACTGTTGCTCATTTCTAAATACGCAGAAAGATATACACAGAGAGGAGGAGGTACTCCTATTCAAAAGTACAAATAACTCCTTATCGCCTCTCCCACAGAGGCACACCACACCTAAAGAAATGTAAATGTTCCGATCGCGCCTCCCTTTGTTGAGGAAAGCACAAGGACAAAGAGGCTAAACCAACTTAAAATCGCTCCCAACTTCCCTGCGAAGCCACACAAAAAACTGCAAACACCACACCAAAGCAAGGCACACTTCGGTTTCAAAACCCGCAGTTAATTTTAAGCTAAAACAACACTTTCTAGGATTCAACAAAGCGAATAAACTTCTTGGAGAGGCGCACACGTTTTTTAAGTCAAAAAACGTGTATCACTTCCTCACTTCTCCAAGAGGCACGCACGAAAGAGGTTCAAATTTCACACTTAAGTTGCAAGATCCTTAAGTCACAAAATGCAGAGAGATCTTCCCGAGGAGGCACACACGTATTAAATGCAATTAGACAAGATTCATACGTCCTCGAGAGGTGCATACATAAACAATTTTCAGCAAAGTGAGTAAACTTCCTGGAGAGGCGCACAAGTTTTTTAAGTCAAAAAACGTGTATCTTACTTCCCCAAGAGGCGCACACGTAGAGGGGTTCCTTAAACCACAAAATGCAGAGAGATCTTCCCGAGGAGGCACACACGTATTAAATAAATGCAATTAGACAAAATTCATACATCCTCGAGAGGTACACACATAAATAGTAAAGTTTCAGAGTATGAAGCGATCTTCCTGGAGAGGTGCTCACGTCTAAGTTATCAAAAAGTATCGCTTCTTGCAACTCCAGGAGGTACACACAGAAAGTTTCAGACTATTATCTGGAAGGACAACACTCTCACGGCGGGTATCCTGCTTCGACTACGCCATAAAAAATGTCTCGCTCCAATTTATAGGAGGGAGAAGAGGTTCTTTGAAATATGTATGCCCGGCGTGAGATTAAGAAACAGCGGTTCAAATGTTGGTCCGACCAGTTTATTACAAATGTTAATAAGGGAGATGGGGAAAGGGGAGGACGGACGCTATTAAGGATTGGGGTGATGGGGAAGGGAAGGCGAGCGATAGAAAAGATAGAAAGAGGCAAGAATTGCGTAAAGCGGGGATAGTCACCACCAGGATCCGGCAGCAGTCCCGTTGCACGATGTTCCGACGGTCCGAGGCCGAAGGGCAGGAGCAGCGAGGCCGGTCTGGGGCAGCGAGAGGGTGCAGGTCGGGGAGGAAGCAGCAGGTCTCAGGTAGCAGGCCCAGGGAAGTCAGTCAGCAAACGGTCCGTAGAGGAGGATCGGAAGGCAGGAAGCTCGTGTCGTGGTGAGAGATCAGTCTCCACGTAGAGATCCGTCTACACGTTGCGGTGAGAGATCAGTTGGCAGAGAGAACCCCTCAAGTCTGTCGTGGTGAGAGATAAGCCTCTCCCGTTGCCGTGGTTGTGGTGAAGGATCAGCTTCCACCGTTGTGGTTATTGGACCCTCTTTTATCCTCCATTTTCTGCTGCCTACGTGACATTCCTGGGGGCTTGAGCAAGAGTCCGGTGCATACCTCCTGAGATGGCCATTTTCCTTGAGATAAGTCCACACAAAAAGACCGTTTCCCGGCCATTAGCGGCAGCTTATCTCTCTCTCGATGCCCCTGGCCTTGTCCATCTGTGCTCCTTAAAGGATTTCACAACCCTTAGCCAGGACCTGTCCATCAGTGTCCTCAAGACAAAAGATTCCTCTGCCTTTGCCCAGGACTTGCCTGGACTTGTTCCTCAGCAAACTTTGAGTCAATGATATAAAAGAATAGTCTCTTACACCACCCCGTGACTCAAAGATTGCTTAAAAATGGGACACTGGGCATCCATTGTGGTGAGAAAAAGATAGCAAGCATAAGGGTAAAGGAGGGAGGTGTTGGGGAATCAAATGTTTCATACAATCATTACAAACGTTACAAAGTAAATAGGGGATACAACATCTTGTATAAAACATGGAATCATACAAAGTACAAACATAAGAGTTGCAACAGTACACAATGCAACTTGCCATAGACACCACCCCGTGATTCTTCAGGAGTGGTAACATGAATATTACATAATGAATAGAAGAGAGAAAAGAGACAAGCGTACATTTGACAATAACCACTAATAATAAATAAACAAGTAATTAACAAATCGTTTCCTTTAGTCGTGAGCTTCCTAATAAACATCCACCCTTCACCCTCCCACCCACCTCCCGCTCACCTGGGAGGGGGGGGGCGAAGGCATCAGCTCCCCTTGAGCTTTTGTTCTGGCCAGCAGTTAACTAATTTCTCTAATCTGACTGTGGGTAATCCATTCATCAAATCTCGTGGAATACCCTTTCTCCAGCCCAGAGTCCAAAGTCCATTGCGTTTATGATCAATGCATCGTGTCCCCGTTATGACTGGGGATGAAACCTTTTTGGTTTCATTNNNNNNNNNNTCCATTTGGCTAGGGAGCCCTTTAACCATATCAAGTTAAAGTGAATTACCTCTAATTGCCAAAAATGACTTTGATTCTGTCGTGGCTGCTGACAGGCGATCTGTGGGCTCACAGCTGTGTTCATTGTGTACCGTGGGGATGGGTGGAACGCGTAAATCTGACTTAGAGTGAGATAAACTGCTTATTTTAATCATAGGCATGAGAAGTTTTCTTTTGCTCTGACAGATTATTTAACAGAACAGCATACTGGTCCTTATATTCTACTGTAGGAGCAGGAGAATAGCAGGACACTTAGCTCCTTTGTAAAGCAATCCATTTCCTAAGCTTGATAAGGAGCTGGTTACTATTTTAATAGTGTTTTTCATCCAGGTGTTGTAGTGTGATTTGCATTGCAGAGAGAAGGGGTGGTTTCTTTTTGCCATGCTTGCCTGTAGAGGGAAATTTTGATGTCTTCTTAGGAAAATCAGTCAGGAAGGTGCATCAAAATGGATTACGAGCATGCATCTTCTGTCCCTCACATTCATTCGTGCTTCTCTCCAAAGGTCAGGGCTTTGTCCTCCCTTGGATCCCAGCATAAATTGCTTCTCAACACTGCTGCTTTTTCCTTCTTCCTCTTCCTTGGCTGCAGCTCCCTCTGTTGCAGCCATAGAAAGCTGGTGCAGACAGCTTCCCTCCTTACTAAAATGGTGTCCTCAGGAGCTTGGGCGTCCCACCCAAGTGCTATTCATGGGCTTTAAAAGATAGAGAAAATGTGTAGTAGCAGTTTTGCTGGCTCCAGGGCCCCAGCCTTGGCACGTCTTATGCTTGAAAACTGGTGAAACCCAGTGACTGACATCATTATATTTTCATTCACCCCTGATTCCAGTTCGTTCTCATTTGTGTGTAATTAAATGCCCAGCTACTGCAGTAATCACCATTACAGAAATTGGTAAACTAAGAAAATGAACCCAACTGAGCCTAGGGATCTGTGGTTTATAGGAGTCACTAATGAAGATACCCAGGCACCCAATTAGGTGTCTCCTCATTAAGTGTTTCCCTCATTAGGTGTCTTTATTTCTTGGGGACAGCCTCCTGCCTTTCACAAGCTCTGACCACTGCTCTGGCAGAGTGAGCACTGTGCTCACAGCTGGAGTTAAGGGGAGCTGCTTTGCTGGGGAAAACCAGATCCAGTCATTTTAACATACCTCATATGCAGTTGCCAGGATAATGGAGAAGGGCAAACAGTCGTGTCTCTAATTAAGCAAACTTTCCTCATGGGAGAGGTGACCCTGAGAAGGCACATCTGTAATTGTCCACCACCTCAAGCAGAAGTAAACAACCAATCTGCCACTGCTCTGCATGGGGAGATGTTCCCAGCAGAAATGTCTCAGGAAAGACGAGGGATGTGAAGTCCTCTAATAGAACGAGGCATCTGCTGGCAGAGGGCAATGAGCAGCTCAACCTGCTGCAATTAACCTGAATTTACTCCTGGCAAGGAGTTTTGTGTAAGGGGCAATGCAAGCCCAGTGCCTGCAAACCGCTTTGCAGCTCCCACTGTTAGCACACCTGAGCGTGTGAATTGTGTAGTAACTTAAACCAGGCAGATGGATCAGCAAGGCTTAGAGGAGTCCTTTGGCCAACAAAAAAACAATGACTCACCATGTTCGAGTGTTGATTGTAGGAACTGATCAAAACTATTGCTCAAACTGTGTAGTGATAGAAATGCATTGAGCAGTGAATTCCTGGCTGGGGGCTGCTGCTGAACACATTCCATTTTGATAGCCAAGCCAGGATGAATATAAATTTAATGGCTTGTGTTTCAGCCACACTCAGGATCCTGATCCCCTATGTATTCAATTGAGTTGTTCTTTATCTTCATGTGTTGCATGTTAATTTGCAGCATATTCTGCATACAGTCCCAGTGCAACACTGTTGTTTACTGGATTTATTCTTCTTAGACAACCCAGGCTCCATCGCTCTATTCCACACACATTAGTAATTCAGAACTTGGGATCCATGCATCAACACTTTAAATTCCCATGGTGTTTCTCAGCTGGGTGTGTGCTTCATGCAGGACAAGGCTGATCACGTGTGACAGAGTGCATGGTGTGAAAAACTGTCAGTGCAACCCCATCTCATGGCATTAGTACCTAATCCTGTGATTTTAATTTACATAGTTGCAGCTTGAGTCACCTCTCATTTGGAAGGAAGGTAGAACATTTGTCCTTACCTAAAATCAGCTCAATATTATGTAATGATTTTTTGTTTTTTTAAGTGAAGCAAAATAAGTCAAGATGGTTTTGAGAGTTTCCCCAGCTTCATAATGTGCACCTGGTAGCAATCTGCTGTTCTGTAGATCGCTACCAGGTGCACCTTATTACCTGTGCCCTATTGCATCTGTAGGATAACTCCATTTTGTTGCAGTGAGCTAACGCTCTAAATTAACTAATGGGCAAATGATTCAGAAAGGAAAGCTTTTCGGCCAGCAGGACTGCAATAATTAAGGTGATATAGGCTGTTTTTCAAGTGCTGAATCTGAAAATATTTTGTACTGTGTTCAAAGGAGTATCGATCTGAGACGCGGTGTGATGTGCAGCTTTGCACTGTGCAGTTCTTCTTCAATGTATTTCTTGGAATGAGTCCTATCTTATAGGTATGGGTTAACATGCATAGTACCATGTAAGATTTATTCCTACTGTTACTTGTTCAAAGGTGTTATTAGCTCTTACTGACAAAGTTAAAGGGAGTGTTCAATTTTTCACATCATTTTGTAAGTTTAAAATATTTCTGTCTCTGTCTGCACCACAGTTAACTATAATACGAAGCATCAATCTTAATTTAGTGCCAGCTGGTGTGCTGTAGATGCAATCTACAGCCTCCAGTGTCAGAAAGATTCCTTCCACTGAATTGAGATGTTTTTGAATTAGACCTGCATGTTTCACTGCCAAACCCAGGAGCTCAGAAGTCTTGGCAGTGCAAGAAAAGTATTATTTTACAATCATATGATATATTTCTTTTAAATCAGATTAACAGTCTGAGGCAATCTGATTTGCCTTATGAGCATTGAAGATGGTGGGTACGGTCGTGCTTTCAAGTTTATTTCTTCAGTCAGGAAGGATGGATACTTGTTTAAGTATCAAATCAAAATAGAGATTTTCCATTGTGAGGAACTGGGGCTTCTTGAAAAAACAAAGAGGAGACTTGTGCTAAAAGTGTGAGAGATGGGGACCATCAGCCCATCTGAATACAGGACAGTATTGACCTTTCCCTTTTCTTGCAGCAGCCCTGACTGCTGGACGAAGGGTGTGTTTATTTTGTGTATTTAGGTGCAGATGGGGAAGGTTGCACTGTATTTAATAATGTAAACTGCCTTTGTCAGCATGGAGTTGAATCTTGGGCACAGTCTGGTAGTCACCTCTGCACATTGTGGACTGTGCTCATAGGGAGTGATGATATCCCAGCTGGCAGGAGACAGTTGGTGAGCTTGCACCAATCCTTCCTTATCCCATTCCCTCAATGTCTCATGGTAAGGAGCTGCTTACCTGCTCACCCAATGATTGCAGAGCTGTGGGCTGCTGCAAGTAACTGCAAATTCCTTCCTTCCTCGTAAGATGTCTTCATCTGCTTGAGATATATCTGTCTGACAGCCAGAGGTTTCACTGCAGATGTATAGGCACAGACAGGTGTATGTGTATGAATATGTGCACCGGTAGCAATGTAATTATGGCTGCAGGGACTTGGTATTTGTTTCCTGACCTCCGTTTCTGTGCACCTGCCATCATTTCATGGCTGTTGGTACCTGAGCAAATTAGGTGAATGTTTTCTGTGTATAATGCAATTTTAGTGATTCTGCAACAAAATTGGCATGTATTGCCTCTGCTGTTCATAAGTAACAGGTGATTTAAGAATATCCTGATGGAAAGCCAACATTATTCATCATGTCTGGCTTGTGCTCGTGTGACTGATGGGTCTTGGGAGATGTTTTAAAGCAGGGAGTAGTATGGCTGGCCTATTAGCTAGGAGTGCACCGCATATATTTTCCAAATGTGTTCCTGTCCACAAGAGCTATTGCCTTAAGGAGAAACCTTTGCCCCTTTAATTTGTTTTGCCTCTCAGTGCAGTTTTCCATCAGGGATTCATTCTCACTGCCCATCCAGACTTTCTCCCAAAAGCTCTATCAAGTTATCGTTTCTACTGATACATTTTTTAGCTTGATTTCTGTCTGAAGAAAATAAATTTTGCCATTTCATAGGTACATAGGAGTTCTGAGAGGATGTTGAACGAGAGTCTTTCCTCCCTGTGAATTCGAGGACTTTTTCATTTCCTTTTCCAGCATCTGAGGAGTTTCATGTAGCCTCACCTGAGATGTCCAACCGTGAGCTGCTGTCTCACAAGCTGGAAACTCAGTCCGTGGTGCAAGGTGGTGAAGAACATCAGTCCCCTGCTTCTGTGTGGCAGAGTTATCCATTCCCTATATGTGCAGGGATACGTGTGTATGTTTAATGTATGGACATATACATAAGTCACTCCACAAGTAATGCCTTCTGTTTATTTCCATGGAAACTAGAACGTATTGAAAGAGCACAGTGACACTATTTGATAGAGCAAATTCTCAGCTACAGTAAATTATTTTTCAACACAGCCACCATCATTAGCTATGGATTTTGACCAGTGTTGAACAAGAGCCTGCATGTTGTGTTTCTAACAATCTGTACCAGTGGAGGTGAGTTCTGAGTAGCTGGGGTTTAAAACCTACCAGGTACATTCTGAATTATAATTCTAAGGAAGAGGAAAAAATCCTGTTAGTTACACTTTGTAAAATAAAACTTGAATGAATAATTACTGCTCTCCACTCAGTGAGCTACAGTTAACAGGGATGAAGTATAGTGCATTAATCTCTGCATTTATGAGGAAGCGTGCATTGTTTTGGAGAATCTGTTTGGGTGTTTTCATGCAGTACCATTCTTAACATGTTCACAAAGGGCAAATGAGACTTGGAAAGGTGTGGGGAAGACATCAAATTCAAAAAGTCATAATTGCTTCCAAGGTTCTGTACTTTCTGAAGTACACTTTCTTAAAGGAAGCATTTGGGCCTCTTATAGTGACCTCCTGTGAAACAAGGAGCGTTGGCAGCAGACGAATACCATCTTCACCTTTTAAGTTGTCTCTTCAAGTAACCACTTCCCCATTTAAGTGCACTGACTGCTGACCCGTGAAGGAGTGCAGAGATTCAGTTTATCTTCTCAGCCTCATTCAGGGGAACGCGGTGTCGTTCCTGCCTCACTGAACTGCAGAAGATGAGGAGATCTCGGTTTTATGAATGGTGATTTTATCCGTCTGTGATTGGGGAATGTTCTTATCGCGCAGTTTCTGAGTCAGCATCCACTGCTTTCAGCTTGAATTATTTATATATTACCTTAAATATAGGAGAAAAAAAAAAAAAGTATTTTGCTCACATTTCAGCAGGAAAATCGTACCAGGCCCCATTACTGAATTCTGTTTAACTGCAGTCTGCAGTTGCTGCAGCCAAGGCTCAGTTCTGCCCTGTGTCCACCTCAGAGAGCAAATCCATTAAGCAGTTTTGTGCACTTCCAAAATGGTCTATTTTCTATAAATTATGTAACTGTGCTGAGTGTGTCTGTGAAACAGGTTTTAAACTGTGAGTAGAGAGAAGGGCAATTAACTGCAAAGGGTAATTTGAAACAGAGTGTTAGATAAATTATATATTTTGTAGGAAATGCTCTGTGATTAGGAGAGCATTTTAAGGCAACTTGTTTTATCAACTGTATCAGCAATCTTATGTGTTGCAGTTCATCTTAATAGCATCTCAATATGTAGAATTATTTTAAAGCAGCTCAGTGAAAATGATGTAGCCTTTCTGAGTGATGATTCTGCTGTACAGGCTGCATGAGAAATGTTAGTCCTGTTACTGGATACGATACCTGAGGCAGAAATGGAAATAGAAGAATAGTCTCTGACCCCAAAGAGCAGTAAGGTTGGATAAATTATTGTTCTGTGTTCCTGAAATAGGGCAGAGTGAAATGTTGTAAGTCCTTAGAGTAAGAAGCATTAAAATGTATTACCTTTTCTTTCCTCAAACTATAAAATCACAAACCTTCACCAAGGGGCTGCTTGAGGTACCTAGAATCAATAGAGATACTACCACTGACTGATTGATTTCTAGTTTCCTCTTAATAACTACAAAAATAAAGAGCTGGGATACCACTGGGGACCAAGGCAACCTTCTTTCATAAGCGCCCTTAGTACCACAGTTTCTGCTTCAGAACCTGAGCTGTTAGCCACGAACCACATGTTGAGGCCCTCAGCCAGCCCATGGTGGTGATGGGCGGCTTCTGCCTACTTCACTTCTCTTTGTAGCCCTCCATGGGCCTCTGTCCAGCAGTTCAGTTCCCTGTCTTTTTTGAACTGGGGAGCCCAGACCTGGACACAGTACTCCCGATACGGCCCCATCAGGGCAGAGCAGAGGGGGGAAGGATCACCTCTTTTTCATGCACCCCAGGACACCATTGGCATTCCTGGCCACGAGGGCACACTGCTGGCTCATGGCCAACCAGGACACCCAGCTCCTTCTCTGCAGGGCCCCTCTCCAGTAGGTCAGCCCCTAACCTGTACTCACGTGTGCAGAGGTTCACGTCTGGCTGTGGTTATTTAAATATGCAGGTGTCTAAGGGGTCAGACCCTTTCTTAGTCAGCAAATATTTAAAAACAGACTTAAGCAGAACCTTCTACGTAAGTGGATGTGTTTGAATTTGGGAGCTGGCTGTTGGATCTGCTTAAGATTTAGAGCCAGGTATTTAGAGGTTAGAAGTCTCAGGGATGGTTTTAGTGGGTTTTTAGAAGGAGTGTTGCCTTTCTCACTGAAGTAAAAATGTTTAATGAGTGTTTAAGAAGTGATCCGTGGCATGTGGAAGCTGGCTCTTAAACAGCACTGCAGAGCCGTGGTGATAAAGTAGCCTGAACGACATAGGCTATCAGTGAAAGCAGGGTTCCTGTGTCACTTAGGAATGACCCTCAGAAATATTCAGTCACTTCACCATTAGGTAACTACTTATTATGTTCAGGGGCTTTTGAAAAATCCATTACCTGCATGTTCAGCTACACGGAGACCTTTACAGTCTGGCTTTTACGCTCTGTGACACTTTGCAGAGCTATCTATAAATATCTTAAAAACCTGGGGCTATTGCTAAAGATGCTCAAATACCTCAGCTATTTTTAAATCTTTTACCCTTATTAGCTTTCACAGCTGGGAGCTGATGTTAGCTTATTCGGAAGCATAAGAAAGTTTGGAAGGAAATCATTTGCATGCTGGAGAACACCACGTAAGTGTTAACTTTTAACATATTTTGTCCTGCTGTTTTTCAG
Seq C2 exon
GTAAAGGTGATGTGTTCGGTGATATCTTCTGGAAGGAAACCAGTCTAGCCCATGCATGTGCCAATGTACGGGCTCTGACTTACTGCGATTTACATATTATTAAACGAGAAGCCTTGCTTAAAGTGTTGGACTTTTACACTGCTTTTGCAAACTCCTTCTCAAGGAACCTCACGCTCACCTGTAATTTGAGGAAACGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000011858:ENSGALT00000019345:9
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0002724=cNMP_binding=PU(45.5=47.1),PF078836=Cupin_2=PU(65.1=48.2)
A:
NA
C2:
PF0002724=cNMP_binding=PD(53.4=71.2),PF078836=Cupin_2=PD(33.3=31.8)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]