MmuINT0125808 @ mm10
Intron Retention
Gene
ENSMUSG00000075028 | Prdm11
Description
PR domain containing 11 [Source:MGI Symbol;Acc:MGI:2685553]
Coordinates
chr2:92965151-92980698:-
Coord C1 exon
chr2:92980511-92980698
Coord A exon
chr2:92975862-92980510
Coord C2 exon
chr2:92965151-92975861
Length
4649 bp
Sequences
Splice sites
5' ss Seq
GGGGTGAGT
5' ss Score
7.93
3' ss Seq
ACCCTGGTTTTCCTTCCTAGGAG
3' ss Score
10.44
Exon sequences
Seq C1 exon
GTACGTGGTCATTTCCCGGGAGGAGAGGGAGCAGAACCTCCTGGCGTTCCAGCACAGCGAGCGCATCTACTTCCGGGCATGCCGAGACATCCGGCCAGGAGAGCGGCTGCGGGTCTGGTACAGCGAGGACTACATGAAGCGCCTGCATAGCATGTCCCAGGAAACCATCCACCGCAACTTAGCCCGGG
Seq A exon
GTGAGTATGGCCATGGGAAGGAGCGAGTGTGCCCTCAGGGCCAGGGACATGCCCATAATGCTAAGTCCACAAGTCTAGGTCAGTACTGATTGTGAAGTGACTCGCCCACAAAGCTAGGGTCACGCCTACAGGACCAAGACCACGCCCACGGGGCTAAGGCCATGTCAACCAGCAAAGGTTACACCCACTCTGAACCACAAAAGCCCAGAAAGCACCTCTGGGAACCTTCCAAGCAAACCAATGAGGAATGCAGTATCGAGCAGTGCAAAGAGCCAGGACAGGCAAGACCTCAGCAAAGTAAGCCAGTGGCCACCCCGAGGGAATTCTCTAGTGTGCAGTCCTGAGAGATCAGCAAATCCCAACCAAATAAATCAGTTGAATAACACCAATCTTGTTACCCCAACACTAACTGATGAAAAGACACTTCTCACTCAGTACCTCAATAGATAACTTCCTGTGTGCTAGCTGGGTTGCCTTCACTTTGCCATGGGATCAAGGTAATGAGAACTAACCTGCCAAGATGTTCTGAGAGTCCGTGGAGCAATGTACTTACCACCGTTGATGCAATCTCTACCTCGACTGTCACTAAGTCCTTGGCTGTAAAATTCTAGACCAGTGATTTTCGTGACATCAGCTCCACCATTGTACAATTGTCCAAACTGAGCTTTACAGAAATGCAGTGACTTACCCAGGGTCACGTGACTAATGAGGACAGAGCCAGCTTTCCAACTTGAGGCATCTGAAGTGAGGATCTAAGTTTTATCCAGACAAAGCCAGCCTTGGTGTTGTTGATCTTGTTCCTGGGAGCCAAAATGATACACAGCATGAAGGAATGGTTTCTACCGGAGGAAGGCTAGTGGACAGGAGAAGATGGGCTCAGGCTGGGAGAACATAGTGGGTTGGCTGTCCATCCATGTGCCACTGGAATGGCTCATTTAAAAGGAACTTGGCTTACTCCCTGCCTCTGGCTCTCCAGCTGTAGATGCCATCCTCAGCCTGGCCAGGGTACACAGGTGCACCCAGGTCCTTTTTTCCAAGAGAGCCATCTTTGCACAGAAGCTGTACATTCACACACCCAGAGTCAATTTGGTCCTCGGAGGCAGAGCCATGCCCAACGTCTTCTCCGCCGTCATCTTAACTAACCTCTTCACTGGATAGCCTTGTTTAGAAGATGAGCGGAGGAGATGGGAGCAGATGACTCACTGAGGTGAAGATGATTAGGAAGACAAAGCAGAACAGGTCTTGGGGTGCCCAAAAGCTGTCTGACTTAGTCAAAAGCATCTGGCAGTTGCCAGCGAGCTGAGAGACCTGTGGGTAAGCCTATCTCCTGACTCCTTTGGAGCTGAGCTTGGGCCATGCTGGTTTCATTGGGATGGCATGCTTCTGGGATAAAGGGTGGCTACTGTTTGGCCTCTTCCTGAAATTCCAGAAGGGTTCCTGTGGGCCTCGGAACCTCCAGAAGTGTTTGGTGAACCTCAGTTGCATCGATAAAAGCAGAAGTGAACAAAAACAGCCAGGGGGGTTCCAGAAGAATCACATTACCCAAAGAAAAGAAAACCAAGATGGGTCACAGCTGCTGTGGCACAGATTCATCTCTTTCCCACCATCTTGGATTCTTCTGGAATATGTCTTCCTGTCTTCTCCAAAGCACCTCAACCTGAATCATCCTCAAGAAGACCTGAGACCCAGGGACATCTCAAAGAGAGGAGAGAGCTTGGGGAAATGAAGGCTCACAGGAAGATTGAGAAGAGAGAGAGAGCGAGCCTTGGAAGATACAGGATTAAGGTATCTATCTGCCCGTGACCAGGCTGGATTGTAGGCTTCAGGAAGAAACCAGCAACCACAGTGGACCCAGCAGGAGCTGTGATGGAAGTGGTCCTTGAGAGTGACCGTGGGACTTGGCAGCTGATGGATGCATGCTAGATGTTAGGTACAGAGTTCTAGACCTTTAAATGTGTCTTGGATGACCTATCAGCCCTGCTTAGAAAGGTCCCCATTGCCCAGTCACTTAAGGTATTACAGCTATATTAGCTTTGTGTGTGTATGTGTGTGCGTGTGTGTACATGTGTGTGTATATGTATATGTGCTATACATGTATATGTGTGTGCGTGTGTGTACATGTGTGTGTACATGTGTTTGTGTATGTGCATATGTGTGTTCATATGCAGGTGCATGCATGTATGAATCAGCCTCATGTGTCATTCCTCAGTAATCGCTTTGCTTTTGAGACAACTCTCACTGACCTGGAACTTGAAAAATGTGCTAGGCTGGCTGGTCAGTGCACCTCAGGGGTCTACCTGAACCCACCGTCCCAGCACTGGGATTGCAAGTGCCTGCCACAACACAGAGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTGTTTTTAAATGTGAATTCTGGAGATTGAAACTTAAGTCCTCATACTTGCAAAGCAAACGTCTTATCAGCTGAGCTATCTGCCAGTCCCCCCGCGCCCCCTTTGTGAGACACAGTTTCATCTATCCCGGGTTGGCCTTGAATTCCATATGAAGCTGAGGCTGGCTTTGAACTCCAGAGCCTCCGTCTCTACCTCCCAAGCACTGGGGCCATTGATGGGCACCACTGCATCTTGCTTTTAGAGAGAGGAGCATCTTCATGGTCAGAGGCTGCTTAGCCAGATCGTACTTATTGTCGTTTTTTTTTTTTTTTTTTTAATGAAAGAGTGTTGTGTGGAGCCCAGAGCTCCTGGAGAGGATATTCTTTATTCCTTTGTGGTTATCTTTGAAGGATACGAGTCGACACACTTAGGTGATCTGTGTGATTTGTGTGGGGATTATAAATTTTTTTCTTTGATTTTTATCCATGAATGTCGTGGAGGATTTGGAATAGAAGTCATGGTGACCTTTATTAAAGGTTGTCCGTGGACCAGGGATTTTACATGGAAGCCACAAGTTCAGAAGGCTTTCCTGCTCAGCCTAGAAAACATGGGTGACTTTATCTTCCATTACAGAGACAATGAGAGTCTTCTGTGATGTAACACCCAGCATCTTCAACGGTCTGATGTCTGGGGAGCCCAAGACGAGGCAATAGGGCACCCTTGACTTTTCAGAGATTCAGCTTGGCGAGCACCCCACCTGTCCTGTGACACAAATACCTTGCATTACATTTTTAAAATTGAATTTGATTTATGTAGTGTATGTAATGGGTGTTTTGTCTTCATATATGCCTGTGTACCGCATGTATGCCAGCTGCCCTTTGAGGTATCTTCTGGGTACCCTGGGACTAGAGTCTGTCACAGAGGGTTGTGAGCTGTCATGTGGGTGCTGGGAACTGAACTCAGGTCTTTTGGAAGAGCATCCAGAGCTTCCAATCTCTGAGATGTCTCTCCAGCTCACAAAAGGCATTTTTTAAAGGGCTCCATCTCGCCCCCGAGCTTTCTGCAGTTCTGCTGGCACAGATACAGGGGCTTCTGGGAGCCGCCCGAGTGCCAGGAGTCCGGGATGAGGTTGTTGCTTAAGCAGCGCCTGTGAGGACAGAATAGGGACTTGAGTGGCTTAAACCCTGCTGTGCTGTTTTCTGTGGGAGCCTAGAGGCGTGAGGGAAGCAGCTGGGGGAGGCCAAGCATGGAGCCTCCTGACCTTCACCCAGGGCCTATCAAATCCTTTCACAGAAGCCTGGACACTGAACAGAGGCTCAAGGTTGCAGCACCAGGACCCTGCCCAATTCAGGTGGCCTTTGAGATTGCGCAACCCCACAGGTTCTGCTGGCAGAACCTTCTGAAGGCTGGGAAACAACTCTCCTCAGCATGTCACCCCCTGGGCATCCCAGCACTTCTGTAGCAGTCTGTGCTGGCCTCACTAAAGGATCTAAAATAGCTTACTATTGGTGATCTCACCAACATTTCAAGGTAATTAAAAATGAAGGAAAGAGAGGCATCTTTTGACAGGTGGGGAAATGGCTGTATCTGAGAATACTTTGGGTTTCGCAACTACCTTGCCCTAATCTTGAGGGAGGCTGATACTCTGGTATGTTTAGGAATCTTTCCCAAGGCACCCCCACTTCTTTTTTCAACCTTAGCCATGACTGAGAACCACAAGACTTTGACCCATCTTTCTTTGTGTATTTCTTATCTTTAGACTGCTGGGAGAATAGAGAGGCAGCAGCTGTAGGGTGGCTGTTTCCCTTGGCTCTCTGGGCCCATGAGCATGGAGGAAGGCAGGGCCTGTGCTTCCCCGTGCTTTCTACTGAGGCCCTGCAACCACCGTGTAGTCTCTAGGTCTGAAGGATAGCTTGTCCCATAGCGGGCAGACAGACACTCAGCTCTGAAAGCTGTTGCATTAGTCAGATGGAGTGAGATGCTGTCTCCTGGGGTCATAGTATGGCAAGCCCCATCCCCATAGGATGATGACTCCTTTTCAGTCTCCGCTTGAGACATATGCCAACTCACAAGTGTAGCATTTATCCATGTGAGGCCTTTCTGTAAAGGTCCTGTGACTCTAGAGCCCACGATCCGTTCTTCTCTCCATTTGGGTCTCACCTGACCCAGATGGTCAGATCCAGGTGGATGTGTCAGGCAATCCTCTCGCAGAAGGCCTGCTCTGTTCCCTGTCAATTTCTCTGTTTGGGGCTTTCCCCCACATCTTCACACCCTGGTTTTCCTTCCTAG
Seq C2 exon
GAGAGAAGAGGTTGCAGAGAGAGAAGGCTGAGCAAGCCCTGGAAAACCCAGAAGACCTAAGGGGTCCCACTCAGTTCCCTGTGTTGAAGCAGGGCAGAAGTCCTTACAAGCGCAGCTTTGATGAGGGAGACATACACCCTCAGGCAAAGAAGAAGAAAATAGATCTCATCTTCAAGGATGTGCTAGAGGCCTCACTGGAGTCTGGTAACGTGGAAGCCCGCCAGCTGGCCCTGAGCACCTCCCTGGTCATCCGGAAAGTCCCCAAGTACCAGGACGATGACTATGGTAGAGCTGCCCTGACGCAAGGCATCTGCAGGACCCCGGGGGAAGGGGACTGGAAGGTCCCTCAAAGGGTGGCCAAAGAGCTGGGCCCACTGGAAGATGAAGAGGAGGAGCCTACATCATTCAAGGCTGACAGCCCTGCAGAGGCCTCTCTGGCATCTGACCCCCATGAGCTGCCTACCACCTCCTTTTGTCCTAACTGCATTCGCCTGAAAAAGAAAGTGCGGGAATTGCAGGCGGAGCTAGACATGCTTAAGTCTGGAAAGCTGCCTGAGCCCTCCCTTCTGCCACCACAGGTGCTTGAGCTCCCAGAGTTCTCAGATCCTGCAGGTAAGTTCCTCAGGATGAGGTTGCTGTTAAAGGGAAGAGTGTGCAGTGCCACTCGTGCGCACTGTGTGGAGGGTGGCCCAGAGCGCTCTGCTCTGTCACAACCACCTGCCAGGAGACCAGAGGAATGCAACTCAGCAGAGGCAGCCCCCTCTTGGGGTGGGAGCCCAGTCCCTCAGGTGACAGAGGCAGGCTGGCTTGAAGATCGGGGGAGGGAGGGCATTGCATGTGCCAACCTGTATATCCTCCTTGTCAATAAAATATGTCCCATTTGCAGGAGGGCTGTGTGCTGTGTTCTTGACCTGGTGTTTTCTCTTGGGGGCGGGGCCCACTGTTGTCTCCCCTGACCCAACTTCTCTTCCCCCAGTCTCTGCTGGGAGCTTTTACAGCTCCCCAAACTCAGGCCAGGAGCACAGCCTCGTCCACTTCTTCCAGACTCTGTCCCACCCACATGGTGCTCTGTTCCCAGCCTGGAGTTCTAGAAGGATGAGGAACCAGAGAACCTGGGGCCGACAGCTGTGTGACTGTCCTTTTTTGCTGGCTGCCTGGATCTCTTCAAGTTGTTGGACCAAGGAAGAACTGTGGTTTGATTCTGTGCAGATTTGCAGCTAAGCCTGGCTGTTTCCCTCAGGTTTCCCTTCTCAGCCACCCTCAGAATGGGTTGGGGTGGACGTAAAAACCACATTTTGCCTCAATATCGAGGCTGCCCGCAGTTAAGAGCCACATGCTCACCCTGACCATAGCGGTGGGCATTCCAGAGCCAGGTCCTCCAGTGTAACCTGAATGTGTGACATCAAACATTCTGCCTCTTCTAAAACATTCCACCCCAGAAGCACCCACAAATCAAAACTGAGCTCAGGTGCAGGCAGCATGGAGCATAGTGAGTAGCGTCCAAGAACACCATGGGCAACTCATGGGGAGGTAACCTCACTGTGGAGAGTAGAGTTACCCTTGACTCAACTCCAGGCTGGGCTTCCATCTCTGTGGGGCCCGCTCTCCCTCAGAGGCCCTTGCTGAGTCTGTGCTGTCAACAGCCCACGCGAACTTCTCCTTCCCCTCTTATTTTCCAGCCTCAGAGAGTATGGTCTCCGGCCCCGCCATCATGGAGGACGATGACCAGGAAGTGGATTCTGCAGATGAATCTGTCTCCAACGACGTGATGACGGCAACCGATGAACCCTCCAAGATGTCCTCTGCCACAGGACGCCGCATCCGGCGCTTCAAGCAGGAGTGGCTGAAAAAGTTCTGGTTCCTACGGTACTCCCCGACCCTGAATGAGATGTGGTGTCACGTGTGCCGCCAGTACACGGTTCAGTCCTCACGCACTTCCGCTTTCATCATCGGCTCCAAGCAGTTTAAGATCCACACCATCAAGCTGCACAGCCAGAGCAACCTGCACAAGAAATGCCTGCAGCTGTACAAACTGCGCATGCACCCGGAGAAGACTGAGGAGATGTGCCGCAACATGACCCTGCTCTTCAACACCGCCTACCACCTGGCGCTGGAGGGGAGGCCCTACCTCGACTTCCGGCCCCTGGCAGAGCTGCTGCGGAAGTGCGAGCTCAAGGTGGTGGACCAGTATATGAATGAGGGGGACTGCCAGATCCTTATCCATCACATCGCCCGGGCACTGAGAGAAGACCTGGTGGAGCGCATCCGTCAGTCGCCCTGCCTCAGCATCATCCTGGATGGGCAGAGTGACGACCTTCTGGCTGACACAGTGGCCGTCTATGTGCAGTATACCAGCAGTGATGGACCCCCAGCCACAGAATTCCTATCCCTGCAGGAGCTAGGCTTCTCCAGCACAGAAAGCTATCTCCAAGCACTCGACCGGGCCTTTGCTGCTCTGGGCATCCGCTTACAGGACGAGAAGCCAACTGTGGGCCTGGGAGTGGATGGGGCCAACATCACCGCCAGCTTGCGCGCCAGCATGTTCATGACCATCCGCAAGACGCTTCCGTGGCTGCTGTGCTTGCCCTTCATGGTGCACCGGCCCCACCTGGAGATCCTGGATGCCATCAGTGGGAAAGAGCTGCCCTGCCTAGAGGAGCTGGAGAACAACTTGAAACAGCTCCTCAGTTTCTACCGCTACTCACCACGCCTCATGTGTGAGCTGCGCTCCACGGCCTCCACCCTGTGCGAGGAGACCGAATTCCTGGGGGACATCCGTGCCGTGAGGTGGATCATTGGTGAGCAGAATGTCTTGAACGCCCTTATCAAGGACTACCTGGAAGTGGTGGCTCACCTGAAGGATGTCAGCAGCCAGACACAGCGGGCTGACGCCTCAGCCATAGCCCTGGCCCTGCTGCAGTTCCTCATGGACTACCAATCCATGAAGCTCATCTACTTCCTCCTGGACGTGATCGCTGTGCTGTCACGCCTGGCCTACATCTTCCAGGGCGAGTACCTCCTGGTGTCACAGGTGGATGACAAGATCGAGGAGGCAATCCAGGAGATCAGCCGGCTTGCGGACTCCCCGGGAGAGTACCTGCAGGAATTCGAGGAGAATTTCCGAGAGAGTTTCAATGGGATCGCCGTGAAGAACCTCAGGGTGGCAGAAGCCAAGTTCCAGTCCATCAGAGAGAAGATCTGCCAGAAGACACAGGTCATTCTGGCTCAGAGGTTTGACTCCCGAAGCCGGGTCTTTGTGAAGGCCTGCCAGGTGTTCGACTTAGCGGCCTGGCCCAGGAACAGCGAGGAGCTCCTGAGCTTTGGCAAGGAGGACATGGTTCAGATCTTCGACCACCTGGAAGCCATTCCTGCCTTCTCCCGGGATGTGTGCCGCGAAGGGACGGACCCCCGGGGGAGCCTGCTGATGGAGTGGAGAGACCTCAAGGCTGATTACTACACCAAAAATGGCTTCAAAGACCTCCTCAGCCACATCTGCAAGTACAAGCAGAGGTTTCCGCTCTTGAACAAGATCATTCAGGTCCTTAAAGTTCTCCCCACCTCCACAGCCTGCTGCGAGAAAGGCCGGAGCGCCCTCCAGCGGGTCCGCAAAAACCACCGCTCCCGCCTGACCCTGGAGCAGCTCAGTGACCTGTTGACAATTGCTGTGAACGGACCGCCCATCGCCAACTTTGATGCCAAGCGAGCCCTGGACAGCTGGTTTGAGGAGAAGTCTGGCAATAGCTACACACTGTCAGCCGAGGTCCTCAGTAGGATGTCTGCCTTGGAGCAGAAGCCCATGCTGCATGTGGTGGACCATGGCTCTGAGTTCTACCCAGACATGTAGGGGGCCTGAGCTCCAGAGGCCACAAAGCCGGTGAATATTTTTTTAATCTATACTCATAAGCTTTGATATATTATATAAATATATATTATATTATATATACATATATATATATATATAAACCTACACTGAAATTTTTTTAAAGACTAAGTTAATTATGTCCACCAGAAGCCACTGGCAGCTTTCAGAAAGGAGCAATGTTGGCAACTGACTCTTGTCTCCGCACTTGGCAGCTGCAGCCTCCACGGCAACTCATCCTCACTTACACGAGCGTGTTCTGGGGCCACACGTGTTCCCACCAAACAGTCAAAGCGGCATAAGCTAAATGATGATTCTCTTGTCACTTTTAGGTGGCTTCTTCTGTTTCTGTTCTCATGTGTTGGTAGAGGGCTGGGGGTTGGGTGCCTGCCTTCTCCTTTTTTGGTATGGTTTTGTGGCGGGGGCGGGGGGGGGGGTGAACTTTGTGGTCTCCTCATTGGCATCCTGGTCCAGTTACATTACATCTGGGTTTCCATGAGGGTGAATTGGATTTCTGGACTAGACTATCTGGTCTTTCTCCCCTCACCTGACTTCAGCTTGGGAGATCTTTCTTTGTTCATTTTCTGATTGATTCCTTCCCTTGTCCCACCGTCAAATGGTCAAATGCATCAACCTCCCTCCGCTGTGAGCCAGCTGCGTTCCCCTCCACCACCACCCCCCCCCCATGTCGCCGCTCCCCTGTGTCACCTCTGCCAACCCTAGGTTGTCAGTTCCCTTCTTCAGGCCTCTGGAGTTTAAAGATATGAGCTGTTACACTGAACGTAATTTTTTTTTTCACATACGAGCTTGAAACTTGGGGGTGGAGGGAGGGTAAGCTTTATGCCTCCCCCTTTCCAGCCGCTGGAGGATAAAGTATATACTTCCATTCATATCTTGGGCTGTTGGGGAGACAATGAGCCACGAGATCTAAACTCCCAACAGGACCATGATTCTTTTGGCTAAATACAGGTAAAATGAAAAGTGTATATTCAACTTTCACATTGTTTTCATCTTTATAATTATGGGATGTGTTGTGGGATTTGTGTTTCTTTTCATAACCAAGGAGCAGCTGTTTTGTAGTTCAAGGGCAGAGCAATCAACGAAAGTCATGCCCTGGGCTACCCAGAACTCAGAGAGTGCCTAGAGAGGTTTTTCCTTTTGCAAAAGGCTGATAATGTGTTCCTCAGCCTTGCAGGAAGGTCACAGGACACCAGGCAGTGCTTCTCTGCCTGTGAACTCTTCTTATTTTGAGTAGAGTTGAGATGTCCTATAGAATAGGAGAAAACAGGAAATGAGGTGGGATTCTCAAGGTACAAGCATGTATACATACCTACACACACACACACACACACACACACACACACCACATGCACATACATGCACACACACCACATGCACACATACACACACAACACATGCACATACATGCACACACATGCACACACACCACTCACACACATACCACATGCACATACATGCACACACACCACATGCACACACACACACACACCACATGCACATACATGCACACACACCACACACACTTTGCAACTACATATAAGCTTTAGAAATGCCTCTCGCCTCCCCCCATAGCGGGGAAGAGAGTGGTTTAAACTAGAGGAGTCTGACCAATGTTCATTTATCTACCAGTATACCTCGCAAAGAGTTTTCAGAAATGTGCATGAGCTGTTAAAAACTTCTCTCTAATTTCCACATCTGATCTGTGTAGTCTGTGCAGATCTCAGAATGTGGATACAGGGTTGTCTTGGGGAAGGGAGGAAGGTCTGAAGGACCTGCCCATGGTCAGTTCTGCAGAGAACTGTCCCTCTCCTTCAGTGGAGTATTGGGGGTTCAACCACAAGGAAAGGCCCCCGTACCCTCAACCTCCCTGGTGGGGCCTGCAGCTATGGTAGCTTCCTTCCTTCTGGGTCTGTCTCACCTCTGAGGCCTAACAGAAATGTCATTAACACTGAACACGTTGCTACCCTTTCCTGGTTCTGCAGTCTGTCCGTCCTCCCTCAGAGCCTCCCTTTGCCTCCATGGTCTTGGTGCTAAGATAAATTTAGAATCATTGCTGCTAGCCAATAGCTTTTCATGATATAAATATTATATATATATATTATATATTATTTTTGAAATGTTTTTGTTTTCAACAGTGATGTAGCATGTTAAAACAAGAAACAAAACTGAACAAACGAAAATCTGGGTCTTTCCAACTGTCCCACTGCCAGGTCTCTTAATGCTGCCTTCTTCAACAAGTTGATACACCCCACCTGGTGACTTTCACCCCTCATCTCACTCTGGTCCCCATCTTAACCCCTCACCCTCTGAGCAGGGAGAGTTAGCAGGAACTAGGTAGGAAAACTCAAAGCCCCTTGCAGAGGCCTGGGAATCCCCCAGCCTCAGCACCCTTGCCCACGCTGAGTTTGTGTCTCTCTTCAGCTGCCCCTCCTACCCCGGCCCAAGCCTAGCTGGAGCCACACGGGCAGCTGTTGCGAAGCACAAGGTCTCCACTTGCCTCGCTCCTGCCTCAGGACCCCATCTCCTCACAGACACAGACTTTGGTCTGGGACAATTTTATTGAAAATTGAATAGGCCGAGGTGGGTTCAGAGTAGGGATGGGTGGCAAGGCTGGTCTCTCATGGGCAGCCTGTAGGCATAAACCGTGGCCTGGGCCCTTCCTTCTTGCCAACAGTTGCCTTACATCTGTCCTTCCCAGTGCATGGGGCTCCCTCACCCAGGAAGGGAGCTCTCCCAGATGGTCCTAAGCCAGACATGTAAAACCAGGACTGACCGTTCCCTCCCAAGGAGCTATAGCTGAGTGAACTCAGGTCCTCATCCATAGAGACAGGTTCTGCCAGGCCAAGCCATTGTTACCTGAGTCTCCTCAAGATACCCAGGATCAGTGGACCTGTCTTGAGGCCTAGAAGAATGAGCTGTTCTGGCAGTATCATGTGGCTTCAGAGTCACCCATTCCTTGGTCCTCTGTCTCCTCAACCCCACCTCTGTCCTCTGCTGCAATGACCTCTGCCTCAGAGCCACTGAGAAGCTGAGCTCTACACGTGTCTTCTGCTCAGTCTCCGAAACTCTGGGTGCTGGTGACTGTGCAGCCAAGCAGGGCTGTGACAGATGCACCATGGGCCACTTTGCCTCGGGATATTGAATGACTAAGGGACACTGAGGTTGAACCCCTTGTAGTCAGCTTGGATGTTCCCTGGGAGGGTCAGGGCTTCTGCCCAGTGAGTTCCATTTGTGATGCCCTGTGATTTCAGACCTGTTCTTATCCTCCTCTTGGAGAAGGGCTTGGGTCTGCCCACCCTTCATGTCTGGCCCGAGAACCATATGCCTGGCTCACCCCATATCTTGGCTGGGTTAACAGACTGTGGGAAGGTAGGGCTTAGAGTGTATATGCAGTCATTTCTGATGGGACAGGGACTGTAATTCAGTCTCTGGAGTAGAACTGGTAGTCACGGGCATAGAATGAAATGTATCTGAGGGGCTGAGACTTATTCTCTCTGGGCTGGTAGTGGCTTTCATTGGTTCACGTTGGTGAGAGTAAGAAGTGAGGCAGTGTTGAAGACTGAGGCTTGTGGCCATTGTGCCAAATGGGTACCTTGCTGAAACACAGGGTTACAGTGTGCCCCCCCCCCCAGCAAAGGAAAACAATGACCACTGAGACAGGTGGACCACTCAGCTGCGTGGGCAGCTCCTGCCCAGTTAGAATCCCTCCAGAGACATCAGAGTGCGGGCATCAGAGGTGCCAGAGCTATTGTTTTATAATGTCTGCTTGTGGCATCTCCAGCTGCCTTACCCCCTCCTCACTGGGGAAGGAGAGTGCACTCAGCTCCGGGACTCTGTGTAGTTAAGTTCTGCCTGGAGCCCTGAATCTGAGGTCCCAGAGCTTCTGCCCTCTGCTCTGGCTGTGTGTTCCCAGCCTGCGTTGTTTTGCTGAGGTTTCTGTTTGACTTGTTCAAGTCAGATCTTTGATTTTGAGCAAGGACCTTGGAGTGACTTGAAGCACCTTTTAAATGCCTTTCATTTGTGTGAAGGGGGAGGGGATGGGGGAAGGTGTGGAGAGGGTGGGTGTGGCCGAAGAGAGGAAGAAATGGACTTTAAGATGTTACCCAGCCTGAGCTGGCGGTCCTTTGCTGCCCACCTGGAGCCAGGTGATGGGGGCCAGGAGATGCCGGATGGGTTGAAGTCTTCTAGAACACTCCTTTGTTTTTTCATTTCTGCCCCCTTGGAAGGCATCCCAACCTGTTTTCAGTGGATAGTCTGGGTTAAATTCTAACCCGGATTTGTGCTTTTTTTTTTCTTTTTGTGATCCATGCACCTCATTTGGCTGCAGGCCCCAGGTTCACTGGAGCTCATGTGTGCCCTGGATCTCCTCTAAGAAGCAGCCCAGCCAGACTGGGCATGCAACGGAAGCAGGGAGAACAGGGCCTCTGGAGTGAGGAAAGGAGGGCAGAGCCGACAGTTAGGGTGGGATCACCCCTTTACACACTGCCCTGGATTCCAGCCTGACGGTTCCTCCCTTCTTTGAGGGGGTGGGGAATGTGTGCCGGGTGTGCATGGTCCTCCTACTCGGAGGAATGCTCTTTTCTACTCCTCTGTTAGTCAGGGTCACTTTAAGAGTCTTTGAGGTAATCTTTGCATGTTAGTGAGAGGGAGAAAAGTGCTCTCTGGAGAGAAAAATAGTCTGGCCCTCCTCTCCCATCTAGCACTCTCTCCCCTCCCCCCATCCCTTCAAATGGTATCACCCTAGAAATACCTATGCAATGCAGTCTCCCCAGGAGGCTGTGCATGGAGGCAGGGGTATGTGCAGTGTATCATACTGATGCTAAGGCATATCAATTGTATATACGGACATATACAGTACGTATACATGCAGAGTAAGAGAGTAAATCACGTCTATATATCTATAAATAATATCCTATATATTTATACATTTTTATGTTTTAAATAGATATAAAAATAGTCTATAGAGCTGGAAGGGTGGCGGGGAAGCCTGGTGCTGGGTTGGGCTTGGGGGGAGGAGACAGGGCTCTGGAGAGGAGGTGGGGATAATGCGCATCAGAATGGGTTGCTAGCCACTGAGATGGGGGCATCTTTCTTGGGGTGTTGGAGAGGAGGGTGGCTGAGCCTGGGCTCTCTCTCCATGCACTTTCTCTCCTTTCCTGCCAGCAAAGGCTGAGATTGGAAGGAGATAGCCCTGAGCTGCATGCAACTGCAGTACCCTACCTCCCAGCACCACCAGCCTGCACTTAGCTGCTCACTGCTGCTTAGCAGTAGGGGGTTGGACTTGGTCCCTGACCCCCAGTGAAGGGACCTCTTGCACAAACTCCCCAATACCCGCCCCTATCAGGAGTGAGCAGCATTGATGGCAACGGGAAAGGGGCACCCGGGACAAACCGTGGTCCAGAACGATGTCAGTCCCATTTCCCAATGCCTCTGCCTACCCCCTGGAGGCCAAGCCTCCCCTGCCTACCCCCTGGAGGCCAAGCCTCTGACACACAGTCCTGGCCTCCTTCACCCATTTAACCACTGTCTCTAGAGCACTGGGAGCTGGGGAGGGCGGCGTGCACTTCAGGTGCACTTGATGCCTTTCCCCATCCAAAGGCCCCACCTGGTGGAAGAGATATATCTGCACACTGACATTTTCAATGGCAACTCAAATTCAGGAGCAGGGCCTTGGCCCACCCGACTCTGCACAGCTGCAGCAGCTGCTGGCTGTACTCAGGACAATGTTGTCCCCTCTTCCCAAACCAACCAAGCAGCCCAACCACCTCCGCTGTGTCAGCAGGTTTAGGTTTAGTTCACAAACACTGTTCTCATTCTGTGACCAGATACCCAAACCCACTCTTTCTAGGGAGGGTATCTTCTTCAGCTTGTCCCCAGGCAACACCTCCCCCCTCAAGCTGGGTAGGGATGTCTGTGGTCCCTGGAAGTCCAGTCAGCTTGCTCCCAGCATCCTCTATTCCCTTCTCTCTCCTGGAAGTTGACAGGGTCTGATGACAGATGCCCTCCCTGCTCTCGAGGAGCAGCCTGCCTTTGGGCTCCTCAGACACACTCATTTCCCATACCGAGCCTTCGTAGGTCTCTCCCTGCTTCTCCTCACCATCCTACCAACGGACCTCAGTCTCCAGCAGACCAGTCCCATACCACAGTTGAGACCAGGTCTGCTCTGCCAATGCCCGTCTCCTTGAGCCACAGCTAGCTGCCAACTGGGCTGAACACCTCCTAGTGCCTGGCTCAGTAGAGTTCAGGACCAATGGCCCAAGCCTTCCTCCCACTACAATGGGTCAGAGCTTGGCCAGGGGATAGGCATTCCCAGTAGCAATCCCACAATGCACTGTACCTCAGAGAGAGAGAGCATGCCACAGGGCATCTAGTGGACCAGTCTCCATGCAGAGGAGGCAACGGCTCACAATACTGCTCACGAGAAGACAAAGGCCAGGCTGTCCTAGGGCATCCCTCAGTCTACCCTTTGGCCTCTCTGGAAGAACCAGTAATCTTTTTCAGCCCTGATCTCTCTCCTCCTCTCCACCCCCAAGCTGCTGAACCATTTTTCATGTCAATCACAAAGAAAAAAAAAAGTGGGGGTGGGGGGGGACTCCTAGGAGCCTATTACCACATACATATTAATATGTTAATACTTTCTTTATTAAAAACAATTCTCAATGTTATTATTTGGCAGACTGTGCTTTCTAGTACCTGTGTGTTGGGGCTAGAACACTGGATACAAATAGAGCTATGCTGGTTTATAATCTGTATGCAGCGTCTTTCCTTTTGTCACATTATCCTTGTAATGTAAGAAGATTATTAATAAAAGCATTTAAATTGCCACCCCAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000075028:ENSMUST00000111274:6
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.109 A=NA C2=0.412
Domain overlap (PFAM):
C1:
PF0085623=SET=PD(43.6=64.1)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types