RnoEX0101344 @ rn6

Exon Skipping

Gene

ENSRNOG00000004268 | Zfp386

Description

zinc finger protein 386 (Kruppel-like) [Source:RGD Symbol;Acc:2985]

Coordinates

chr6:143901280-143917575:+

Coord C1 exon

chr6:143901280-143901386

Coord A exon

chr6:143909822-143909948

Coord C2 exon

chr6:143914266-143917575

Length

127 bp

Sequences

Splice sites

3' ss Seq

TGTGTTCATTTTGATTTCAGGAA

3' ss Score

9.16

5' ss Seq

TGGGTGAGG

5' ss Score

6.74

Exon sequences

Seq C1 exon

CACACCCGGTCCCGCGACCTTTGCGTTGGAAAATGTAGGCGTGATTTCCAGCTTTTGGAAGCCCCGGTGCTTTACGAAATCACGGTAGCCGGAGAGCCATGGAGATG

Seq A exon

GAACAGTTGACCTTCCGAGATGTGGCTGTTGACTTCTCTCCGGATGAGTGGGAATGCCTGGACCCTCCTCAGCAGAGGCTGTACAGGGACGTGATGGTAGAGAACTACAGAAACCTGGTCTCTGTGG

Seq C2 exon

CTCTTTCTCATCATTGTACCCAGAACTTTTCACCAGAACAGATCCTAAAATATTCCTTCACAAAAGGAACTAATGGAAGTTGTGGCCTTAAGAGTTTATACTTAAGGGAAGATTGTATATATATAGATGAGAGTAAAGCCCACCATGGTAGAGATATGCAATGTCTAATTACAAGCAATACCAAAGATGTCATTGACAGCAGAGATCAAGAACACAAAACCGCTCTGACAATAACTCCTGTGAGGCCAGATACTTTGGATGAGCCAAGTATCTATAACTGTAAATATCCACAGGAAAGTTTTCAGCATGACTTAACTTTGAAAGAAAGTTTGGAAGATCTGATAGATGGGTTAATGTTTCACCCAAACAGTTCCATAGATAAAGAATTAAGAAGCAGAGGACTGATATCAACAAGTGATCAAATTGAGACTTTCTATACTGAAAGATCCTTACTCTTCAGTCAGCAAATAGCTATCTCCTATGACCCAAAGCACAATTCT

VastDB Features

Vast-tools module Information

Secondary ID

ENSRNOG00000004268-'0-11,'0-3,8-11

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.035

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8)

Main Inclusion Isoform:

ENSRNOP00000005648