RnoEX6030777 @ rn6

Exon Skipping

Gene

ENSRNOG00000032552 | Zfp799

Description

zinc finger protein 799 [Source:RGD Symbol;Acc:1359692]

Coordinates

chr7:15069254-15073052:-

Coord C1 exon

chr7:15072926-15073052

Coord A exon

chr7:15072633-15072693

Coord C2 exon

chr7:15069254-15071228

Length

61 bp

Sequences

Splice sites

3' ss Seq

TTTCTTGCCCTGTATTTTAGGAA

3' ss Score

11.21

5' ss Seq

AAGGTAATG

5' ss Score

8.99

Exon sequences

Seq C1 exon

GAGCCAGTGACCTTGGAGGATGTGGCTGTGGACTTCACCCTGGAAGAGTGGACTATGCTGAACTTATGGCAAAAGCAGCTCTACAAAGAGGTGATGCAGGACACCTTGAGGAACCTGTGCTATATAG

Seq A exon

GAAACAAACAGGAACACCAAAATATTGAAAATGAGTATGAAAATCTCTGGAAAAAACTAAG

Seq C2 exon

TAGTCAGTTGTTGGAGAAACTCTGTGAATATACGGAAGGTCATCAGTGTGCAGAAATCTTTACCTGGGCTCCAGAGTGTGCTGGAAACCAGAAATCATGTCCAGGAGTTCCCCCATACGAAAGCCATGTCTACGAAGAAGTGGTTATTGGCCATTTATCTCTGAATGTCCCCCCTCATTCTCACCCAGGACACAAACCGTATGATGTTCAGGAATGTGGGAAAGAGTTGTATAAACACAAAGAATCTGGGAGCACCTCCAATCCTTCCACACCCTTTCAGAAGCAAAGAAGAGTCCACGCTGAGGAGAAACCTGAAACTAGTCACTGTAAGGAAGACTCTAGGTGTCTCATCTTCAGTCACAATGATGACAGGACATCCAGTGGAGAACAGCACTATGAATGTAAGCAGTGTGGGAAAGTGTTCACTTCTGCCAGCTCTTTTCGAAGGCACGAGGAATATCACAGCCGAGAGAAAGCGTACGTTTGTAAGCAGTGTGGGA

VastDB Features

Vast-tools module Information

Secondary ID

ENSRNOG00000032552-'1-3,'1-2,4-3=AN

Average complexity

A_C1

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.088

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.1),PF134511=zf-trcl=WD(100=8.2),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=3.6),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=4.4)

Main Inclusion Isoform:

ENSRNOP00000038590