RnoINT0041819 @ rn6
Intron Retention
Gene
ENSRNOG00000010903 | Crb1
Description
crumbs 1, cell polarity complex component [Source:RGD Symbol;Acc:1309947]
Coordinates
chr13:56395250-56408285:-
Coord C1 exon
chr13:56408146-56408285
Coord A exon
chr13:56395433-56408145
Coord C2 exon
chr13:56395250-56395432
Length
12713 bp
Sequences
Splice sites
5' ss Seq
CTGGTAAGT
5' ss Score
10.65
3' ss Seq
TCTGAACTTTTATCCTGCAGGAT
3' ss Score
9.83
Exon sequences
Seq C1 exon
TTACCACTGTGACTGCACGGGTAGTGGATTCAGAGGGATCCACTGTGAGTCCTTGATTCCTCTTTGTTGGTCAAAGCCTTGTCACAATGATGCGACATGTGAAGACACTGTTGACAGCTATATTTGTCACTGCTGGCCTG
Seq A exon
GTAAGTGACAAATACTTTATCAGGTTTTTTTGCTGATTTTTTTTTCATTTTTACTTACACTAGAAACAAATTGCTCACAGAAAGTAAACATTATTGTCATTAAAGGTACTAAACCAGCACCTTCTCCAGTTTTCCTCATTGAGTTGCACTCATCATTATCCACACAGTATTGATATTAGACTATGCATTGTTGTAAGACCGGCAACCACAGGACCAATAATGACTAGAAACCTCTAGGTTCAGAATTAGGACAGTGGAAACCTGAATTCCACATTGTTTTCCTGAAGAAACATTCACTGAGATTGCTTTCATCTACCCATTCTCCTAGGCACCAGAAATATATAAAAGCAATGCGTTAACCTTTTCAGAGTTTGTCCTGTGATTCATGAAGTTAGCCCAGCTCATAATTATGCTGCCCAGACAATGTATTGAATGCTTCCCCCAATAATAAAGAATTGACAATGGACATTCTTATAAGATCAACAAGAATATATGTTAAACACATAAAACTATAGTGAAACTAACATATACTTAAAGAGTAAAGATGTTACAAGAACCATCAGAAAGCAGTTGGTAGCACTTGAGATATATTATTGGTAAGTAGAAAATGTTTTATTAATTCTGGATAACAACTTGATATATTTATTAATTTAAATTTTCCCTCTCTTATTTTTAATCCACTGAAAAAATGAAAACTCATAAATACTTTATATTGTATCATATAGACTAACTGCTTATCTATCTTTGTTTCCACTGATTTTTTTTTTCTTGTCAGAAAAAAAAAGTTAACCCTGTATTGGAACACGAGATGAACCAATCCAGTTCAAAATACCTTCTGGTTAAGAAATGTTTATTGTCTAGGGAATTCTGACTGACAGTTTTGATCAAGGTACAAAAAGAAGTTTTGAATTCCCTGGTTTGCAAATGTCAGTATGCTATGTTTTCTGTTTCAGAAAATGATTAGGAGATACCTGTTGTCCTCTAGTCATCATTATGCTATCAAATACTGGTTTAATAAAAACTATACTATCCTGTATTCTCATCACAGGAAATTCAGTGTGTTTGACACATTTGAAAGTATCTGGGAGTCAAAGGTGCATATCTAATTCTGACAGGAATACAGTGTGGTAAAATTCAAGTTGGGTGCATTAGGAAGTTATCATGAAATTATATTAAAGAAAATATTACTGTCTAGAAAATATGACTGAGTCTGGCTCAGGGACTTTGGACAAGTAACAAATCTACTCTTCAGAGTGATATTTCACTCATAAAAAAAAGATGTTGACAATAATGTTCACCCCCTTGAGGTGTTTTAGAAAAAAATTCTAGTAATGAAATATAAGGATCTTAGGTCCGCTTAGAACATAGAAGTAACTCAATAAATACTAACTATTTAATAAAATTAGGTTGATCTTTCTATGCTCTATAATTAGCACCAAGCAGCAGGTGATTTATTTTAGGAAGGAAGTGAGGGAGGGAAGGAGAATGGAAAGAAGCAAGAAATGTGGTAGGTACACATAGAACTTGCCTTGACTGACCTGTTCATTTACAGAGAGTTCTCTTACAGTTTAGTGTAAGCTAGTTGAGTGAAATAAAACTAAAGATGCAAGAGATTTTTAAACAGTACTGAGTAACTTGTCAAAACTAAGACAACAGTGGTGGGGGCATGGATGAGTAGATGAGCCATTGTTATGGCTTGAATATAAAATGTCTTCCACAGCACAAAATCAGGGAACCATTTCGGGGGCGGGGCCCAGCTGGCAGAAGTAGGGCACTAGAAGTAGTACTTTGAAGATTGTTTCTATCATTTGGTCCTTACCACTACATGTTTCTGCCACCTGTGACTGAGCCATTTCTCCCATGCCTTCCCTATTGCGATGCACTCCAGGACCCAAAACTATGTGCTCTTCTGTTATGATATGTTTTAATTACATCTATGAAAAAAACAATTAAGTGGGTCACGTAAGAGGTAAAGAACATGGATATATTCAGAATCTGGGTTTCTATCTGAGACCACCGTGTGGCTGTTGGGTTACCCTAGATAGAAAAGAATGGCTTTGTACCCTCTGCTTATTGTTGAATATAATGAGATTCAATGCTACAAACCACTTTAGAAGTAAGAAGAAAAACATTTCTGACTGTAAAAATAGTCCTTAAAAAAAAATTGGCAAGAATCACTACGACATTTGTCTAAAGCCCTTATTTCTAAAGCAAATGATCTTGAGAAGCATCTCAAAACTTAAATGTTTATTACATATATAATTGGGTGTGAAAACAAAAACAAGCAAACAAGCAAACAAACAAAAAAAATCCACAAACCCAGAGGGTCTGATTCAGTATCGGGTTGTTTCTTAGTACAGAGATTTATAGAGAAACTTGTTAAAAATATTGACTGTGGTCTTGACTGAAGGAGTCTATTTATATCTGGTTAAAGAGAACAGCAACTAAAATTCCCTCCAGAGCCTCGGTGGTATGGACAGAACCGGCAAACACATAAATCAGGGCTTCCCCCCACGCTCCCGATTGAATGAGATAATGCACGAGCCGGAAAAGCAGGGAAGGATTTATTACAGTTCTAAATCTCTTCCTAACCTGGCTGGTGTGTGAGACTTGAGTCTTAGCACAAAAAGAAAATTACAAACAGCCTGTACCTCTCTCTCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTTTTTCTTCTTTTTAAATAAAGTCCACTATATCAAAATCCTGATACGTAGCAACCTACTGTGAAAACGATTGTTCTGTAGCAGTTTATAAGCATGTAAGTATGAAGTGGAAGGATTTTAAAAGCAGGCATTCTCATTGAAGACATTCAAAGGGTTCTTTGGGGAGCTCACCATAAAGAACCGTGAGAGCTTTATCTGACGTGCTTCTTAGTTCTTTTATCCAATGCTTGAGTTTCTTCTTCAGATTGTTGAGAAAGGCCCCAGGGGTTACATGAAATAAATATATTATACTATGGCACAAGGTGATTTATGCTGTGGTTATTATTTGAAATAGGATCTACTCAGGATTTTATTCGAGTTACAAAATGAGCAGTCAGATTGTGTTTTCGTTACTGGTTCATTAATAGTTAATTCTCTAGTTATTCACTGAGCCGGTTTTAATTCAGTTGTTGTCATTTTAACCATTAATTAGTACTATTTATGCTCACTCAGTCATTGATCGGAGGTCAACTATTTATGTATTGCTGGGTAGTGAAGTGTTGAATAAAATACACACAGTCCTGTTTATGTGGGGCTGACAATCTGTTGAAGCAGACAACTACACAGACAAATAAACACATCATTAAAAGTTGTCAAAAGAGCAATGGAAGAAGGAGGCTGAGGGAAATGACAGGAAACCAAGGCATTTTATTATGTTGCAATTCCGTAAGACAGAAAAGAGTAATGTGAGGTAAAAAGTCTGCAAACTGAGGAAGAGTTGGCCAAGAAAAGGCTTGGAAGAGAATTTCCCAGGAGGGAAGAGAGCAGTTGTTGAGTCTGTGGGTAGAAAGCATCATCAGGGAGGGAGAGCATGCTGGGATGGAAAGAACTCATATTCCAAGAGAGCTTTTAGGTCATATTAAGGATCTTGAATGTTATCCGATGTGAAAACAGGAAACCATTTTTAGTGTTTTAAACTAAAAGAAGACTGTGGCTTGATTTCCAAGTTTTGCGACTTAGGACTATAAAATTTACCTTAAAAGTAAGACGCAGTGTCAGCCCTCTTCTTCCTCTCACAGTCTTGTCAGCTGCTGTTCCTGTGGGCCGCTCTTCTTGATTCACCAGGCCCAGCTTTCTTGCAGGCAGAAAATTTGGTCCTTACCTGTGGTCCTCGAGGCTCAAGTTCGCTCATGGGTCGCTGCCCACCGGCGGCTCTCTGCAGCGGCAGCAATCAGGAAGACCTGTGCCGCCCCTTCCGGGAGCTTCAGTGCACCAGGGTTCCAGATGGTCTTTGGCTTTTTCCTCTGGCGTCCGAGGATGTGTGTGCAGGGAGCAGTCTCTTCTGGTTTCCCAGGCTTGTCCTGCCTCTCTGAAGGTTTAGCTCTCCCTCCCACGGGATTTGGGTGCAGAGAACTGTTTATCTGGTCTGTTTCTTTCAGGTTCCGGCGGTGGTCTCAGGCGCCAGGGGTCCTGCCGCCTCCTGGGCCCTCCCCCACGGGAGCCCAGAGGCCTTATACAGTTTCCTCTTGGGCCAGGGATGTGGGCAGGGGTGAGCAGTGTTGGTGGTCTCTTCCGCTCTGCAGCCTCAGGAGTGCCCCACCTGACCAGGCGGTTGGGTCTCTCTCTCACCCGGGTCTGGGAGCAGAGAGCTGCTGCGGACCGGGATCCGCGGGTGTGGGACTGCTTCCGCTGTGGTCCGAGGCTCCTAAAAGGTAGAAGTTTTTTCAGTAAACTAAGGTTGACATTATAAGACATTACTTGTGGGTGTAGGTCTGTGGTCCTTGAAATACTCCATGCATTTGTTGTACTGGCTCACAGAGTACCTGACGCTATTTCGGTGTCCACCCGCTGATAATGTCATGTCTGATAAATTTATATTTTGGGACTCGAACTACACACCAGCACAAGCAAACAAGATAATCTCGTGATGGATAAAATATGAAAATGATAGAACACATTTTTGGGGACAAAATTTATTAACCATGGTGAACCTAGGGAAAATAAATATAACAACATATTATGAAAACTTAAATTTGGTATAGCAAATGTTCAATGGGTATTTAAGTGTACTTGTTGGTGGTATGACAGCAGTGATTACCACTCCACCTTGTTATCATCTGTCAACCTTGGTCTACAATGACAAACATGCATAACCTAAAATACAGTAAGCATCTACGTTCAGCTCAACTTCAATGGCTATACCTAGACAACACAGTAGTTGGCACTGTGAACCGTTGTTCAACTTCATGAGTGCTTACACATTCCACACTTTAGGACATCTAATGGTGAGGTAGAGGTTAGAGATGTCATAGGAACTTAGAGTAAACAGGGAGTAAACACGGCAAGTCATAAAAGGTCACATGCTAAAACATCCATATATATTAAAATCCCCATCACACAATAAAGTCAGTAATTTTATAGGTGTCTGTGTGTAAAGACCACCAGAAGCAGATTGCATAGAACAAATTCTCTTTTGTGATGGATATTTACAAAGTCATTTATTGTTTAAAATCTTAGTCATAATGAAATTACCTACTAAATCTACGGAAATATGAGAATAATCTACTTCTGGCATGCCGTTAATAACTCTGGCCTTACTCTCGACCTTCCAGCGGAAATCCGTGGGATTTCTTCTTGATGCTGATGCAAACAACATGACCAGGCAACCTTGGGAGCGAAAAGGATTATTTTGTTTGTACTTCCAGACTCTAGTTCATCATTAAAGGCACAAATTCTACCCAAGGGCAGAAAACCTGCGAGCAGAAACTGATGCAGAGCACATAGTGCGAAACATGCGCATTACTTGCTTGTTCCCTTTCTCTATAATAATACTAACTTGCAGCAGGTTGACATAAAACTAGCCAGCACAAACCATGACACCGCCCTTGTCCCAGTTTGTGAGTCACACCAACTTGACCACACAGAGTGTCACTTGCCAAGGACCAGCCTCAGCTTGGAGATCGGTTCTAAGAGAATTGGCATCCTTGAGAGCACTAAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTTTTTTTTTTTTTTTTTATAATTGAGTATTCTCTTATATAACATTTCGAGTGTTATTCCTTTTCCCAGTTTCCGGCAACATCCCTCCGCCTCCCTTCCCTTATGGTGTTTCCTCAACCCTCCCACCTTCCTCTCCCCACTAGCTGTCACTGGGGATTTCAGTCCCTTACCAGGACCAGGGCTTCCCCTTCCACTGGGCTCTACTGGATATTCATTGCTACCTATGGGGTCAGAGTCCCAGGGTCATCCATGTATAGGTCTTTAGGTACGTGCTTAGTCCCTGAAGCCTCTGATTGCTTGGCAATTGCTTGTACTTTGGGTCTCGACCCCTTCAAGCCTCTTCAGTTCTATTCTCTGATTCCTTCAATAGGGGACCATTCCTCAGTTCAGTGGGTTTGCTGCTGGATTCGCCTCTGTATTTGCTGTAATTCTGACTGTGTTCCCCAGTAGGATCTTACATCCGGACTCCTGTCGTTCCTGCACTATTTGCTNNNNNNNNNGCTGTGGTCCCGAGGCTCCTAAAAGTAAGTTTTTCAGTAAACTTAAGTTGACATTATAGACATTACTTGGGGTGTAGGTCTGTGTCCCTTGAAATACTCCATGCATTTGTTGTACTGGCTCACAGAGTACCTGACGCTATTTCGGTGTCCACCCTGATAATGTCAGTGTCCTGATAAATTTATATTTTGGGACTCGAACTACACACAGCACAAGCAAACAAGATAATCCTCGTGATGGATAAAATATGAAAATGATAGAACACATTTTGGGGACAAAATTTATTAACCATGGTGGTAACTAGGGAAAATAAATAAACAACATATTATGAAAAACTTAAATTTGGTGATAGCAAATGTTCAATGGGTATTTAAGTGTACTTGTTGGTGGTATGACAGCAGTGATGCCACCTTGTTATCATCTGTCAACCTTGGCTACAATGACAAACATGCATAACCTAAAATACAGAAGCTCTACGTTCAGGCCTCAACTTCAAGGCTATACCTAGACACACAGTATTGCACTGTGAACCGTGTTTCAACCTGTCAGTGAGTGCTTACACATTCACACACTTTAGGACATCTAATGGTGAGGTAAGAGTTAGAGATGTCATAGGAACTTAGAGTAAACAGGGAGTAAACACGGCAAGTCATAAAAGGTCACATGTAAAACAATCCATTTATATTAAATCCCCATCCACACAATAAAGTCATATTTTATAGGTGTATGTGTGTAAAGACACAGAAGCAGATTGCATAGGAAAATTTCTTTTGTGATGGATATTTTAAAGTCATTTATTGTTTAAATTCTTAGTCATAATGAAATTACCTAGCTAAATCTAGGAAAGTATAGAATAATCTACTTCTGCATGCCGGTTAATAACTCTGGCCTTACTCTGACCTTTAAGGGAAATCGTGGGATTTCTTTTGATGTGATGAAACAACATGACCCAGGCAACTTGGAGAGAAAAGGATTTATTTTGTTTGTACTTCCAGATCTAGTTCATCATTAAAGGCACAAATTCTAACAGGGCAGAAAACTGGAGGCAGAAACTGATGCAGAGACCATAGTGGAAAACTGCTTACTTGCTTGTTCCTTTCTCTCTAATGAATCTAACTTGCAGCAGGTTGACATAAAACTAGCCAGCACAAACTGACCCCTTGTCAGTTGTGAGTCACAAACTTGACACACAGACGTGTCACTTGCCAAGGACCAGCCTCAGCTTGGAGAGGGGTTCTAAGAGAATTGGCATTTGAGAGCAGCTAAAGAAAGAACTCAAAGTCAAATCATGTGTTACAAGCTGGCATCTTATGTTCTGCTTGAGACAGCGTTCAGGTTGCTATTTCCCTGTTCTGCTTTCTCTGGAGAGCTCCAGATAGCACTTTGATCCAGACAATTTTTTTTGCAAATCTAAAGCCTCTCTGGACTGCTCACTTCTTACAGATCAAAAGCCTAGTCTTTTATTTACATAGCAACTCAGTCTTTACTCTAGGTTCCCTTTTGATTATTCCATGAATCAACAGCTCCTTGATTCTTAGAAAGAGACAGGAAGCATAAACACAGACAATAAGATAGCTAGGTGGGATCCTGCCTTGAAATTACCATTCCTACCATGTCTGGGCCTGCGCACTAACTGCCTCTGCCCTAGGCTGACCTTGAATTTAGAAATCTGCCTATCTTGTGTCTGCCTATCTTTGCATTCTTATGACGAGGTGGCCTACAGCGCATCTGCCTCTGTTCCTTTATGTTTGTAAATCAGCTCCCTATACAATTCATAATGTATCCTTATATTTTTCATAGTTGAGAAATTATTTTCTTTCAAACTCATGTTTTCAGTGTTCTTTCCTACAGCCTGAAGGGCTGTCCTGAAGGTCACAGCATTCTCCATGTTGCTGAGACATAGTGTCCTCTCCTTCTGAACTCATGCTGTCTCTGATTATCACGGAGTCATTAACTTTGGCAGAGAGGACATTCCTCAGAGGAGGAATGTGGAAATATGTACACTATTATACAAACAAACCTTTCGCCCACAGCAACACATGGAGGCCCACACCCTGCTGGCTCTGTTCCAGAGGCATGAACCCTGTCTCACTGTCCCTTACATACAGCCAAACTGGACTCCACAATCACTGTTAAGCAATCACCTTTCCTTTCTTGTTCATCCCCAAGATCACACATTGATATAAACACCAAAATATGAAACATTTTTGCAAACTTAAAAAGTCCCACAGTCTCTTTTAGAATCTAAAGTCACTCAAGTGTTGGTTCCTATAAACGTTTTTTAAAAAATTGAGTTAAATACTTTATTTAAAGAGGGAAGAATCAGTGAATGGTCACAGTCATATCAAAGCAAAACAAAACTCCGATAGTATAAATCACTCAATGTCCAGTATCTGGACACTCATGATTTTTTGGGCATCTTCAAATGGCAATCATTTCTTTGGCTCTGCCCTCTGCAAAACAAACATTATCTCCTAGGCTCTTGCTGGCTCAATTCCATGCCTGCTGCTGTCCTTGGTGGCTATCCCATAGTACTGACAACTCTAAAATGCCAGGTGTTCATGCTGCAACTGTGCTGTACTCTCACCAATGCCCTCTCCTGAGCTTTTCTTGAAGGATACCAGTCCTGAGGCATGGTGCCAAAACTCAGCTGCTCTCCATGACCCCCTTCTTCAGGCCTTCAAAACCAGGACCACTTGGGTGACTCTTACACTACCAAGTTAGGCTCCACTCATAAAGTATAACCTTGGTTGGCTCTGGAGCACAGCTTGAATGTGTTGACTCTAAGGAAATACTATCAGAAGATTTCACTTCAATAATGCTGGCCTCTTTGCTCTATTTCTCAACTCCAGCTAACCAGACACACTAACTATCCCACTAAAGCAAAAATTTTATTTCAGTTGTTCTGGTATCTTGTTAACCACAGCTGATTCTTCAGCACCAGTTTAAAACAAACAAACAAACGAAAACCCCCATAGAGTCTTAACTTAAAAATAGCAAATAGCCCTGATTGAGTCATTAAGAGACTTTCAAACTTCCCCTGAAACTTCACAAGTCAGGTTCCAATGTCTGCATTTCTTTTGACATTATCATTTTTAAAACCCCCACACAACAGCCCACCAAACTTTGAACACCCAGCAGCTTTTCAAACTCAAAGTTCCAAAGTCTTTCCATAGTCCTCCCCAAAACAAGGTGGGAAGACCTATACTGGTGCCAATTTCTATCTTACTCTAACTTTTAAGGGTACCTTAGGGTTTCTGATGCTGTGCTAAAATATGGTGACCAAAGCAACTTGGGAAGGAAAGGGTTTGTTTGGCTTTTACTGCCATATCCAGTCCACCATTGAAGAAAGCCGGGTCAGGAATGCAAAGAAAGCTGGAGCCTGGAGGCAGGAGCTAATGTAGAGGTCTTGGAGAAATACTGCTTACTGGTTTGCTTTTTCCTCTGTGATGACTCAGACGGGGACTTGGAGTTGGCTATGTAGATACTGCTGCCTTTTCAGATATTCTCTTTAAAAGTTTCATTTAAAAACTGATAAACTGAAGTTAATGGGTTTCCACTTTATGCAGTGTTCAGATTAAATCTTATCTACCTTGAAATTCCACTTTATTTCAAGCGTTACTGATTAAACCTTTCCAAAATATTGACCCAAATCATACATCTTTTAGAATTTATTACGTATCCCTTATCCATTGCTACTAGAATCTGTTTCCAGGTAGCAGTCTCTTACCGGCTTCTCCTGCTAGTTCTTTGAGGGTGGGCAACCTTGCTAATTGGCACCAGCTCGGTGGTGAGCCTCTTTTAAGACATGTGCCTGGCATTCCAGAGCTTTGTCTCAGCAGCTCCTCTGAACTTTTATCCTGCAG
Seq C2 exon
GATACACAGGTGCTCTGTGTGAGACGGACATAAATGAATGCAGTAGCAACCCCTGCCAATTTGGGGGGGAATGTGCCGAGCTGTCCTCACAGGATCTATATGGAAACACCGCTGGCCTGCCTTCCTCCTTCAGCTACCTTGGAGCCTCGGGCTATGTTTGTATCTGTCTGCCTGGATTCACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000010903:ENSRNOT00000032122:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0000822=EGF=PD(43.8=29.2),PF0000822=EGF=PU(80.6=52.1)
A:
NA
C2:
PF0000822=EGF=PD(16.1=8.1),PF126612=hEGF=PU(69.2=14.5)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]