RnoINT0048687 @ rn6
Intron Retention
Gene
ENSRNOG00000005451 | Dnah11
Description
dynein, axonemal, heavy chain 11 [Source:RGD Symbol;Acc:621088]
Coordinates
chr6:145898344-145912252:-
Coord C1 exon
chr6:145912110-145912252
Coord A exon
chr6:145898506-145912109
Coord C2 exon
chr6:145898344-145898505
Length
13604 bp
Sequences
Splice sites
5' ss Seq
AAAGTAAGA
5' ss Score
6.91
3' ss Seq
TCTCACCCTGCTCTCTACAGATG
3' ss Score
10.88
Exon sequences
Seq C1 exon
GAGACATCCCAGGTCTGTTCAGTGACGAAGATACCGACAAGATCATTTCTGGGATTCGTAATGAAGTTCGAGGCCTCGGCATAACAGACTCCAGGGAGAACTGTTGGGCATTCTTTTTGGCCAGAGTCCGACTACAGCTCAAA
Seq A exon
GTAAGAAATGTTTGCTTTACCTTTGTATTGCTTTAAAGCTGTTGCTGACACTTGAATGTGCATCTTAGTCAGGACTCATATTATGGTTTAGTTCAGTGACTTCTTTGAAGGGACTGGTGCGTTTATCTAGACCGTGTTTGTATTGTATGTCCCTAAGATCAGGTATGATATTGATCTCCTGGGAAGCCCTGGACTGGGCAATATTGAAGGCATGTTCCTCTGTCTCAGAGAAGCTGACATTGTTGGAGGTAAGGCATGTCACCAAGAACTTTCCTGTGGGACAAGTACAAATAGGCCCATGGGAAGGCAGGAAGGGACAGCCTCCTCCTTACTGGGAATAGGTTTATCCTGGAGGAATGGTGTTCCATTACCAGGCATGGGTAGGAACTCAAGGCACAGGCATTTAGGGAGAAGAAACAATATTGTTGGTTTTATTTAGATTTACTCATTCTGTTTCATGGGTATGGATGTTTTGCCTGAATATATGCATGTGCACCATATAAGTGCCTAGTACCCATGGAGGTCAAAGGGGTGTTATATTCCCTGGAACTGGAGTTATAGATGATATATATATATATCATATATATGTCATATATATAAATAATATATATATAAATAATATATATATGATATATACATATATCATATATATATTGTGAGCTGCCATGTTTGTGCAAGGAACCAAACCTAGGTCCTCAGTAAAAGCAGCAAGCAGTCTTAACCACTGAGTCCTTTCTCAGACCCCTTGTGAGAGGAAACATGGAAGATGAACTCTGAAGAACCTGTTTTGAAAAAGCTGAGAGAGCTCTAAAGGGTCAAAACGTGGAGTTCGTGTAGGGAGAACGTGATCACTGGAGCTGGAGATGTTCACTGTGATGAAGTGAGTTGCTTACATCATCACGTGAGCAGTAGTTACGTCCTGTACTAGTGTGTCCTTTGTGGGATGTGATTCAGGGGTGTTGTTTGAATATTCTTAAAGCCCTTCCATTTAAGATACACTTGGCTTTGGGGCGTCATAGAGATTGGTGCAACTAACCACTAGCATCAGTGAAGGTCAAGTGTTACAAGAAAACAGACACTTCCGACCTGGAGATGTCAACCTCCTAACACTGCTGTAGTGATTTGTAGTGCAAAGTTGGAATCCTTAAGCTATTGCTTTGCTGGTTCTTCTAGTATCTCTATACCTATCAGTGCGGTGGAAAACTTGTGTTATCTACAGAGCACGAGACACTGGAGAGGGATGAATGGACAGCAACAGTGGCACCAGCCAGAAACGTTCAGTTCCTTAGGGAGAAGCCTCTGAGGCAACTAAATCTTGGATGTGAACCTTCTAAACTCAGCCCAGAATTATTCAGTAACATTGACATACACATCCAAATCATAGACCACTAAGAAAGCTTGCTCTTCTGTCAAGTTTAGACAAGGTAGTGACAGCCTTGGGAGTTTCTTGTCAGCTTAGAAAAATCTCCTCTTCCTCATCTTCCTCCTCCTTCTCTTACTCCTCCTCCATTTCTTCCTCTTCCTCCTCTTCCTCAACCCTTTCCTCTTCTTCTTCCTTCTCTTCCCCCCTTTCTCTCCCTTCTCTTCCTCTTCTTTCTCCTCTTCCTCCTCTTCCTCCTTCCTTTCTTCCTCCTCCTCTTTCTCTTCTTCCTTTTCCTCCTCCTTCCTTCTCCTTTCTTCCTCCTCTTCCTCCTCCTCTTCCTCTTTCTCCTCCACTTCCCCCCTTTGTCCTCTTCCTCCTTTATCTTCCTTCTTTCTTTTTTCCTTCCTCCTCCTTTCTTCATCTTCAATTATCTTTTACCCTCTTTTCTTTCTTGACGGAACTAATAATGTAGTTCAAGCCAAGTTGAGATCCAGCAATCCTCCCGCCTCTATCTACCCAATGCTAGGATTGCAAACACATGTTACCCTGCCTGATCTTCCAAGGTCATCTTGCTTAGAGCAGCTGTTCTCAACCTGTGGGTCATGATACCTTTTGGGATGAGTGACCCTTTTACAGGGTGACATATAAAATATCCTGCATATGATATATCCAAATTATGATTCATAACAGTGGCAACATCACAGTTATGAAGCAGCAATGAACATAGTTTTATGGTTGGGTCACCACAGCATGAGGAACTGTATTAAGAAGTCACAGCACTAGGAAGCTTGAAAAGCTCCAGCTTAGAGACCGTTGTAACTCACTGTGGCTATGGGGGAGAAAGTCCAGCTACTCTAGCTAAGAGCACCTCAGGACCACCTGTCAGCCCAGCCTGGCTCGCTAACCCTCGGAGATCTATGGTCTCATCAGTCTTAGCATCATCTGGATGTTCCCTTCCTCCTCATCTCCAGGGAGAGGAGGAGGAAGAAAAAGAGCTGGTTACCTGTTTCAGAAAACTAAAACTCACCCCTCCCAAAATATGCTGAGCTGTTGTCCTTGTGACCATAAGTATGTCACAGCTACAGTGGGCTGAGGAGAGGGAATACTTGATCTTCACACATTTTTTATGACAACATCGAAAATGACTTTGGGAACAGAAGCGTGCCTCAGCTCACCCAGGGTGATGTCCCAGTAAGCCCACCGTAGGTCAAGCGTTGTAAGTTGAAAATGCATTTCCCCTGTGGGATGTCATAGCTTAGCCCCACAATGCACTAGGCCCTCAAGACATCCAGGACCACTGGTCATCATCGGAGGACAGCAGCCTGTATGCCACCAGCCTAGGAAAGGTTAAAATTCAAGATTCTCAGCATGATTTCTACAAATGTGTGTTGCTTACATGCCATCAGAGAATTGAAGAATCCCAGCGTTAACAATCACAAGTTAGGTATGATTTAGTTTTTAAGGAGTGCTACCTCTAGAAAATATTTCCTACTGTATAAAGATGAGAAGAGTAAGATGAGAGACATCAGGTTATCTTAATGCCAGGTGTTCCTTTCCCAACAGTTTCATGCATCTCCTGTAGTAAATCAGGAATAATTGTGGTTACAGTCTTTCTGGATTCTCCGTTCTCTTTCCTTGCTAAGCTCCATTGGTTTTAACATCACCCTATACAAATTAGCAATACTTTCTTATGTATTCTAGCATCTAATTACTGTTTCTGATCAAGCTTTTCCTTGTTCTCCTGTGTTAGTACGTGTGAACAAGCACTAGCATCATGGTGTCACATTATTCTGCCACCATCTTAATTCTGATTAAATCCTGCTAACTACTTAATTTCTGTAAGGGAGAATTTGATTTTTATGATGTAATGTGTTCTACCGTTTGATAAGCTGTCTATTATTTTAATATGAAAAAAATACTATCTTCTAATTTTGGGACTATCTGATCTCCTGTTTTACCAATCTGGTTGCTGGTTTTTCATGTATATGTATGAGCACGTTCACATGAGTGAATGTATATGCAGGTACGTGCGTACACAGGTGTACACTGCATATGTATGTATGTGAGTTAGAGATCAGAGGGACCCCCCTGTCACACATCCAGTGCCTTCCACCTTTTATTCAAGACAGGGTCTCTCAGCATGCTAGAGCGTCATCAGGTAGTCTAGGCTGGCTGAGTCAGTCTTCTAGGATTTCCCTATCTCTGCCTTCCATTTCACCCTTGCTAGAATTACACGTGCACAACAACCAACTTTTATTATGCTATTTGAGACCTGGTTATATGGCCTGAGCTAAAAAAAAAAAAAAAATCGTTTTGAATGTGTGTCTTATCCCTAATGCCTTGATAAGGACTGCCAAAAACAAGTCCAAACAGGGATGCTAATGGTGAGGACTGTGTCTAGATCCTGACTTGGGCAGGAAGCCTCTGATGCTTCACAGTAATATCTCCTATTGGCTTTTGATTTCGCACATCCATTTTGTCATGGAAGTCTCTCCTGAATTCCTTTTCAGTGTCTATCAAGATAATTACATAGTTTTTCCTTGGGCTTATTAATATTCCCAGATTGATGCCCTGCTGTTCTGCATTTTCATACTTTTCTTTTACAACCACCAGTCTTTCTTCATGCATTTCTTTTTTTTTTTTTTTTTTTTTTTTGGTTCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCCCTTCCTAGGTAAGCGCTCTACCACTGAGCTAAATCCCCAGCCCCTCTTCATGCATTTCTTTCACTCCACCCACAAGCACAGTCTGCTGAGATAGAGACCTGCTTGTGCCTTACTCAATCTGCTGACCTCTTCACCCAAAGGAGAACTGGTATGCAAAAACGGACCACCTGGCAGCTTTCGAATTAAAAGACAGCTTCAGTCTTCACAATCTCTTCATACAGCCCTCATATATATTATCTTTAAAAGCTGCCCACATTACTCTGATGTTTTCACAGACCATGCAGGCCACAGACTAGATTCCTGAAGAGTTGGTATCTTCTTTGCCCATGCTCCTGATGAAACGGGAGCTAACTGTGCCACAGGGGTCGCTGATGCTACCCATCACTCATGTTAACCACTAAGCACTGTTCTGGTGGAAATGCAGGGCTGAGAGAATCTATTGGCACATAGGGGTTGACTTCTGAGTCCACAGCCTATTCCCTATCACCAGTGATCAAATGCACGTCCTTGGATTACTGCAAAGGAGCTAGTGGTCTGAGCCTATGTAGTATGAGACTCCATACAGGATCCTCATCTTGTACTAGAGAAACATCAATTTCCTCTCTCCTCCTGTGGGCTTGGATTAACCCAAGACACTTTATTTTGTTTCCTTTCCTGGCCCTGTGACATGGGCAGTATTTGGCTTATTTATTGACCTCTACTCTTAATTTAGATATCTGTCCATTTCATGACCTGACTGCCTGTCTAGGCATATGCAGAGAGATGCATTTCTGATAATACAAGAAACATAAAGTCTTTGTAGAGAATGTAAGAAAGAAAATAAAATGCATAAAGAAAATAAAAACAATCTTTAATTATATCATCTAAAGATAGCATACTGATAAACTTCATCCAAGTTTACTGCATAGAAACACTGTATTATATTTATATATAATGAATGTAAATTCAGGAAGGCTTTAGGTAACTTTTCCCTGTCCTTTATTTTTTTTATTTAATGTTTTTTAGGTTTGAAGGTCTACCTGGAAAAAAAAGTAAAATATTTCAGGAATTTGATGCACAGAATAAACCATTTAAGGCAAATGTCATCTATTCTAAATTATATTATTTATTAGAAAGTCTCTAATAAAATATCTTGATATTTTCTAATATTATCATATTTTCACCATGAAAAGTTTACTCAAGTCTCCTATTGTATAACTTCTCCTCTAGCCAACCATTTTTTGAAGTATTGCCTATCTTTTGTATTAAATTAAATACCTTCATATATGGGATACAATATCTAAGAATCTCCTTAGGTCCAATTGATTCGCTCACCTATGAACAATAATGAGTCAGCTGTCTACCACTAAGACAAAACACCCAAGGAAAGAGTTTGAAAAGCATAGGATCACAGTTTCTGTGGCCTTCATCCATTTTTACTTGGGCAGAACATCACAGTGGGAGCCACATGATGGGGCAGAGATAGTCACCTCACGGTTGCCAGTTAGAGTGTTGAGGTCCTAAAGACAAGACAACCCTACTAAGGCAAGAACCCAGTGACCTGACCCCTCTCACTGCATCTGCCTCCTAAAACATCTTAGCTTCTTTAACCGTATCGTCAGATTGTGAACAAACTGATTCCCTGATCAAATCAGAGTCCTCACAACACAGCCACTTCCCAACAGCCCCTGCTCTGAGTACCTCTGCACTGGAACCAGTCTTCAACAAGATGATCATGGAGCACTGTTCTAGCCAGGGGCGCGTTATCATCCATACCCCTTCTGCTCAGGATTCTCTTGCATTGATGAAGAGGAAGTTAAGGGCTAGCTGCCTAGGGCTAGGTCCCTCTCTCTGTTTTTCTAGGGCCTTACTTGTTGGGACCACCACTGTGGCTCTCCATGTTCTATGACCGTTGGTAAATTGCAAAGAAATTAAGGTGACAAAAGATGATATCTGTATCAGTTATTTACTTTAGAGGAGAAAGGGTGTTTGTTTTGGCTTATGACTAAAGGGGCATGGAGCCCTTCATGACAGAGAGAACATGGAAACAGGGAAGGCAACCAGCCAGAGCAAGAAGCAGAGAGTGATGAACCACAAGAGCCTATGAGGGATTCTCTTACTCAAGCCACCACACTACCTCGTGCTGTACATCTGAGTTTCACAAACTTTGATATGATAAGCCAGCACAACCTCAAAAACTTATGACACAAATACTAGTATTCTGTTTGCCCAAATGGAGCTTCTGAACTGCTACCATTTAGACTTTTGCCGTTCAGCATGTGTTTATTGGGATCCCGGGATGTGTCCTGGGGAGATGACAGGAGTATGACAGTCCAGTCCCAGTCCATCTGGAGCCCACCTCACTGCAGGGACAACATTGGTCCAATGGCTACCACAAGTACTATAAGATGAGAGGGGTATTAGCAGCCATAACAGAAAGCACAGTGATAAAGGTTTCACTGAGGGAATCACTGAAAGCAGATGTCTTTTCTCTTATTTTATCCTCTAAATGGTGTGTATGTGTATGTATATGCACATGTGGGAGTGAGTGTTCATATGTCTTTAGATGAATGTTACGTGTGAGTGCATAAGCACATGTATAAGATATGGATGCCAGAGAGCAGTTTTGGGTATCACCCTTTAGGTGCTATCTACATTCTACCTCTACCTCTACCTCCCTCTCTCTCTCTGTCTCTCTGTGTCTCTCTCTCTGTCTGTGTCTCTGTCTGTGTCTCTGTCTCTCTCTCTGTCTCTCTGTCTCTGTCTCTGTCTCTGTCTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGGGTCTCACTGGCCTGGAAGGTCTACATAGGCTGCACTGGCTGGCCAGAGAGCTCCAGAAATCCCCCCAACTCTGCCTCCCCAGGTGTGAGTCTGCACCACCACACCTGGCTTTTTCATATGAGAGATTTTTCAGGGTTGAACTAAATCACAGAGCTATCCCCATCAACCTCTAAAAGAACTTTTAACACAGGCAGTGAAAGGCTCGGTCAAAGGTCAGAGAAAAGGTCAATTTACACAGAATGTACTTTGTATCTAGAAAAGCGGTTTGTGTTCATAGCCATTTTCCAGCAGAGTGTGAGGCCTGTCCTTAACACACATGGAAGGTGGCTGCTCTAACAGTGGTGCCACCAGAAACTGCATGAGATGTCTCAAATACTGACCTATTTTCAAGAAAAATATCTATCAATTTAAAAAAAAACTAACAAAAATGAAAGATTCCATTAAGGAGCTGAGGATTAGCCTGCAAAGCATTACCCAATCACTGCAATCCCAGGGACAAATCCCAGGGGAAGGAGCCCCTCCTCCTGCCTGGGTGCCTCAGGATCAGATGCATTCTTAGCTATGGAGATTGCATGCTCATTCTTTGTAAGTTCAATGACTTCCTTGTTTTAAAAAATGGAAACGGGCTAAGGAGATAACCTAGTCGGTAAAGCACTTTCTGTGTAAGTGTGAAAGCTTGAGTTCAAATCCCAAAGCCCACATAAAACTGAGTCCAGTAGCACAGGCCTGTAATCCCAGCACTCCTACAGTGAGAAGGGAAGTGCAGATGAATCCCCAGAAGTTCTTGAGCCAGTCTGGTTTCTTTGGGTTTTACTGTTGTGAACAGACACCATGACCAAGGCTTATAAAAGACAACATATATTTGGGGCTGGCTTACAAGTTCAGAGTTTCAGTCCATTATCATCAAGGTGGGAACATAGCAGCATCCAGGTAGGCATGGTGCAGGAGGAGCTGAGAGTTCTACACCTTCATCTGTAGGCTGCTAGTAGAATACTGACTTCCAGGAAGGTAGGATGAGGGAGGGGTCTTAGTGGCACACCTACTCCAACAAGGCCACACTTCCTAATAGTACCACTCCCTGGGCCACAGACATACAAATCATCATACCTGGCTTTTGCAGCAATAGCAAACAACACAGACATGTCTCAAACAAGGCAGAAGTCAAGGACAGACATGTGCCCTGTGCTACAAGCTTACCCACGTACGTACACACACACACATACACACACACACACACACACACACACACAAGAAATAATCGAAATGAATTGAAATTCTCTGGTACCGAGTATTACTTTTAAGTAAAATCTGAAACGCTTAACATCACAAGGTCAGAAGTTCTGAGATGATTTTATTGTATGCTCTCTAAAGTAGAAGTTCACATCGAAGTGTCTTATGTGTACACATTTCGAAGATGCTTTTAAATCTTTAAGAAGAATCGGAATTAAAAGTTGGATAGATGGAGGATACAGTAAGAAGGCATGAAGAGCATGATAAAGTGACAGTTTTCAGAGAATGCATTCTGTGATAAAGCCCCGTTCCATAGGGGCTGCCTCAGCAAGACTCCGGGCTTATTATTCTTGAAATATACTGGGGCTTTGGATGATGAATGCAAACATAACTTATGGATAGATGCTTTGGAAGTAAATATGTGGGAGGATCCCTTCTACCTGAGAATAAACTACTTCAGCTGGAAAAAAAATACAGTGACTGTAGCAATTCAAATTTCCATTAGGAGAGGAAATGGCCTGAGTCCTGTTAGTAATACACAAATAAATATATACTCAAGGAGGGATTGTAGCTACGGGAAATTGAAACGTGTTACAAAGCATGGTGAAATGTGGGTTATCACAAATGAGTCATAGCACCTGTACGGGGGATGGAAAAAAATAGAAAATGTTATAGTATAGATCCCAAAAGCAAGTTCTTGACACCTGATACCCAAATGTCAAAACTGCGGGAGATGCATCTGTAGTAATTTCAGGGCTGGCTTTTGTGTTTGGGAGAATTTGCTTTTTAGAAACAGCACAGCTGCCTGGGACATTTAACTTTGTTTCCATCTAGGCTTTTAACTTTGTTTCCATCTAGGCATTTGTGTTTCTTCCTGTCCCCACTGATGGTTCATTTGGCATTGTCAGGCAAACCTTTGCAGGGAAGATGATTATTGATTATTCCATAAATCTAGGTACTTCCTTAAAGGTAGCTAAACTGAACTCAGATAAGGGGTGGGGTTCTTTTCTCTTACACACACTAACTTGAGTTTTACTTCAAGGCAAGGATATCTAATTCCGAACCCTGCTTCCCTCCCCAAAGCTTGTTGATTAACACCCCTTGCAACCTGGCTTGTGGGCTCACTACAGTCTAATTCTTGTCTTGTGGAAACCTGACTAACGTTTACATAGCAGGGTGTTTCCAGGCAGACACAGCAGAGCTACTGCAGTGGGATGAATCTGATCATTTGTTTGGGATCCTGTTTACACAGTCTCCAGCTAGGAGTACATACACAGTCTCCAGATAGGGGTATAGGATACAGTTATTAGGACACTTCAGTATCTATGCCTGCCTGTCTTGCTTATATATGAGTAGAGATGTTAGTACAATATTTCTGTTTAACCCAGGTATCTTATTTCATGAATTTAAAAAAAAAATCATCCAGGGTTGGGGATTTAGCTCAGTGGTAGAGCACTTGCCTAGCAAGCGCAAGGCCCTGGGTTTGGTCCCCAGCTCTGAAAAAAAGAAAAGAAAAAAAAATCATCCAGCTGGTAAGGTACTTACCATTGAGCCTGTCAACCTGAGTTCAATCCCTGGAACCCATGTAAAAGTAGAAAAACTTTGCAAAGTTGTCCTCTGACTTTCACATACATGCTATAACACACACACACACACACACACACACACACTCATACATACACATGCACACAACATATATGTGCACAATAATAAATTTATTTTTAAAAATCGTGTCTAACTCAAAGCCGAGGTTAGAAGTTGACAGGAGTACTCTGTACTCTCTGATTAAAACTCAACATTCCTGAACACTGAATTGGACTAATAGTCAAAGCCTCAGGCTAACAACACCCTTCCAATCACTTCATTGGAACTGTGAATGAGCAAGTTTATTTCTACAGTTGAGTTTCCAGGTACTAGTTTAGATGATTTGTGATTCCTAAAATTATCAAAGGTCTCCATTTCATTCTGTGAAGTACTTGACCAACTTCAAAGTCATTGAAAAGGTGACCAGATGCAGTGGTGCACACCATAGTCCCAGCACTGGAAGCTTAGAAAGGAGAACTGCCGTGGGTTTCGACAGAGTGACTTCCAGACAGCCAATGTTACATAGCCAGAGCAGGTCTCAAGATACTAATAAAACCGAAGCTGGAAGCTGTGTCAGCAGGTGAGAGCACAAACTCTCCTACTCAGGACTGGAGTTGGGTCCCCATCACCCATGCAGAGTGGCTCATCACCTGTAACTCCAGCCCCAAGGTATCTTGGACCTTTGGGTTCTTTTGTCATCTGCACAGACATGCCCACACCCACACATATACGTAACTAAAGAGAAAAGTGAGATGTTGCAAATTATTTTGCTTAATTTCCCCCCTGGCAAAGTCAAACTGGCATGCTGTCCTTGTGAATATCAGATGGACCTGGAGGAGTTTAGTCCATTTTGCATAAGGTAAGATTAGTTTTCCCCCTTCTCAGTTCCTCTTGCTCCTTAACATCAGACGTACACACATTGTTTCATGATCACATGTGCTAAGCAAACTGTGGTGACAATGTCTAATTTTTTTTACAGTTCAGGTCTTAGGTTTCTCCTTCCAGCCCTTTTTTGTTCTCCCCACACTCAAAGATTCCTCTTCTCTTCCCAAGATGCTGGCTTTCCACAACTGATTCTCTTTGACTAACATGATTTCAGAAACTTCACTTGAGTACAGCAGAGACAGAGAAAAACAAAACAGCATCTCATACTTGAGGTTCCAAGTATTTTCTTATAACTTCTATATTTAATCTATTCCTATCCTCGACACTGGCATACTGCTGACTCTTAAGAATGTGTCTGAGTCATGTTTATTCAACCTTGTTGGGGGGGGGAATGATCTTTCTGTGTTAATTTACTACCATGAATAAATTGTTTACTGACAGATAATATAACATGGTCTTTCAACAATCTATTTTTGTTTTCCAGAATTAGAGATACTTTCTTGTGTCTTGTTACTAGGAAACGGTTAAACAAGGGTGGGTCATCATCATGTGATTTTACACTGGGTTGGGTGCTAGATAAAGAAGATCCATGGCTCTCAAAAGATACTCTGAGACGTGACTTATATTATAAGGTCCAAGCACCAGGAAGTCTGACTGGACAGACAGTCACAGGGCACTGTGCTAAGCCCATCCCAGACAGGCCAATACTGCATAGTCTACTTATACTAGAGCCACCGAGTTAAACTTGTAGAGGCTGGTACAGTATCTGCCATAGACCCAGGAGACTGTGAGGAAGTCTCTGTGGACAGAGAGAGTTGAATAAATGATGAAAAACCAAAACTAGATAAGATTGATGAAGCTAAAAAATGCATGGTGAAAGGGACCAGATATAGATCTCTCCTAAGAGACACATCCAGAACATATCCAATACAGACGTCAATGCTAGCAACAAAACACGGAACTGAGAACAGGACCCCCTTGGGGGAAATTAGAGGAAGGATCGAAAGAGTTGAAGGAGCTTGCAACCCCATAAGAACAACAATGCCAACCAACCAGAGCTTCCAGGGACTAAACCACTACCCAAAGACTATACATGGACTGACCCAGGGCCCCAACTGCATATGCAGCAGAGAATAGCCTTGTTGGGGCACCAGTGGAAGGGGAAGCCCTTGGTCCTGCCAAGGTTGGACCCCCTAGTACAGGGAAATATGGGGGGCAGTAAGGGGATGTATGGGGGGAATACCGGTATGGGGAGGGGGAGGGGAGGGGATGGGGGCTTATGGACAGGAAACCGGGAAGGGGAATAACATTTGAAATGTAAGTAAAGGATTTAGCTCAGTGGTAGAGCGCTTACCTAGGAAGCGCAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAAAAGACCCAAAAAAAAAAAAAAAAAAAAAAAAGAAATGTAAGTAAAGAAATATATCTAATGAAAATTTTAAAAAAAGAAAAAAGAAAAAATGATGAAAAAGTTCAAGAGATGTACATTCTCCCCTTAGCTGACAGCACCATACTACACACTAATACAATTAAGCAGTGCAATCATAGTGGGAAAAAGTAGGGATCAGCATCTGTCTGTCTTGAAATGTTGACGGTAACAAACAAACCTGTTCAATGAGGTATCATGCAGGTTGATATTTGCTAGAGTTTTTTCTCACATGGACTTAAAAATGCCATGGATAAAAAAAGAAAAATGTCCTCTAAGACAGTGACAACACCCATTGGCTGACCATGCTCTGGACCTCAGTCTTAGAAACTGGAGGGCCTCAGTTTCTACCATCAGCCTAAGAAAGAGATACTCTCCACTCAGGCCTTTCCCGGCGGACAAATAATTACCTAGCTTTCAGGTTATTCTGTATCCTCACACTCCCCCTGAGCTTCCCCCTCTGATGGTCCTCTAACGCTCAGGACCCTTGAAGGGTACGATGATAGGGTCACACCTACTCTGATGACGATGAAGAGTTCCTCTCATCCACTGTCTGTGACAGACCATTGCAACCAACCTCAGGTTCTATTGGCAGAATCCCTGTGTCTAGAGAAAGTATACAAATACACAACTGGATCCTCTGGCTGTCTTGCCTTCATCCATGAATCCTACCAGCTGTGCAGTGAAACTCTTTGAAGAGGAAAACAAACGTATTGCGCGTGCACATTATTTTTATTGTCTCAATTCCCTAAACAGCACAGAATAACAACCCCCTACACTGTTTACCTTGTCCTAGGGACAATAGGTAATCCTAACAGGAAGAACTAATAGGTATCTGAAGGATATAGGTTCTTTCTGTGAAAGTAATATGTTTTTCATGAAAGTGTTTGGAAAATCCTTTGAGTTATGTTGGGGGTCCTAAAACTGATCCCTGGCAGATCCCAAACACAGACCAATGGCTTGTTTGGGTATTAATTAACTTTTAAATCATTAAATAGCTAGTTAAAAAAGAACTTTTAGCTTTCTTCTATCAGGAACTTTTCTTAGCAGAAACATTACCCCCAAGTCTTAACATTTTTCTCTGAAAAAATCTCAGGTAAGAACTAAAGCAGATGTTTTTATTTTAAATGCAAACAGAAATTAGTGTCATTTATGATGATAAAACTGGCTCTATTTTATTATTTTATATTTGTTTTGGGAAGGGTATTTCAGCTTTGTGAAACCCAGTGAATCATGTAACAGAAGCAATTTGAAGGTGCAGTATTGACACTCTTCCTCCATGATGACTTACTTTTTATATGTGACTTGTATTAAGGAACAATTAAAATTTCCCAGTCCCAAAGGGAATCATGAGCCAGGCTTGAGAGAAGAAGCACCACATTTTGAGAAAAACACAACAGTATTCCTGTCTGCCCTGTGGTGCTGTCACCCTGAAGTTCAATGCTGCCTTGCACCAGTGGCTTGGACTGGGGTAGCTGACCAGTGTGTCTGGCCTTGCCCCCTCCCTCACTGTCTGAGATTTCAGTGTACTGTGTGGCATACTCGTCCCCCTGTTGTTTCTGACCTGTGCCCTCTCACCCTGCTCTCTACAG
Seq C2 exon
ATGGTTTTTTGTTTCTCACCGGTTGGTCACACTCTGAGAGTTAGAGCCCGGAAGTTCCCAGCCCTAGTTAACTGCACAGCTATTGACTGGTTTCATGCATGGCCACAGGAAGCTCTGGTCTCAGTCAGCAGGAGGTTTATTGAAGAAATCGAGGGGATTGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000005451:ENSRNOT00000007233:61
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF127802=AAA_8=FE(17.5=100)
A:
NA
C2:
PF127802=AAA_8=FE(19.8=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]