RnoINT0076347 @ rn6
Intron Retention
Gene
ENSRNOG00000048449 | Itgb3
Description
integrin subunit beta 3 [Source:RGD Symbol;Acc:628868]
Coordinates
chr10:92667879-92685484:+
Coord C1 exon
chr10:92667879-92667954
Coord A exon
chr10:92667955-92685395
Coord C2 exon
chr10:92685396-92685484
Length
17441 bp
Sequences
Splice sites
5' ss Seq
GAGGTGAGC
5' ss Score
8.7
3' ss Seq
TCTATGCCTCTTCATTGCGAAGT
3' ss Score
-8.19
Exon sequences
Seq C1 exon
ATGCGAACGCGGCGGCCGGGACAGCTCTGGGCCACTCTGCTGGCGCTGGGGGCGCTGGCGGGCGTTGTCGTCGGAG
Seq A exon
GTGAGCGCGCGGCGGGTGTGGGAACTGCGGTGGGATCGTGGGAGCTGGGGCTGAGAAGCTGGTCCTTCCTCCGGTAGCCTCGAGGGCGCATCAACGGTGGCAGAGACCCTGGCCTGGCCCGGGGAGCAGGGGCAAGATGGGGCTCTGCTGGGTCGTCCGGGTGCGCCGGCAGAAGGATGCTGCTCACCTGCTTGGGTGGGTGTGTGCGCTCTGGGTTGCCCCTTCCACCTCCCCCGAGTTTGTTCCTCTGGCTGCTCCTCTGTTAAGGAGGTACAAGATTCGGGCTCCATTCGTTCTGGGACCGACCTCTCAACCAGCGCTCCCTGACTGTGTGCAGGGAGTCAGCACAGAGGTCCTCGGGGCTGGCTTTGTCTTTTCCTGCGTGTGACCCACACCATCAGCTGCCTGAATCTTCAACTTTCAGGCTCATTAATGCTGCGGGGAACGGGAGTGATGCAGTCCGCAGAGTCCTACGGGAGCTGGAGGTGATGTTGCCTGGGGTGGAGAAACTGAGGTTCCAGGTCAGCTGGAGCAAGTTAAACCCTGCAGATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACACGTGTGTAATACGGTCTCATATATTTCAGGATCCTTCACACTCTGTGTAGTCGAGGGTGACCCTGAACTTTAGACTCCCCTGTGCCCCTCCTATTGAGTGCTAGGATTATAGATCTGTAACACCTCTCAGGGCATATAATGCTGCAGGGAGTTGAACCCAGGGCCTCCTTATGCCAGGCAAGCACTCTGTTAATTGAGCTACATCTCCAGACTGACTATTTGTTAAAGGTAAACTTTATTACGTTGCCTTTGGGGTTAAGCAATCTAAAAAAAAAAACAAAACAAAAAAACAACAACAACAAAAAAAAACCATTTGGGTGGCTACCTTGAAGACCCCTTTCTGATGGTACGGATGGACGTAGACATGGGACAGGGGCAGGGGTTTCAGAACTGATGGTTGGCCTGTGTTGTTGAAGCTTCCAAGTGAAAGATGAAAACCGCGGTCTTTAGCCTACATTGAACAAGCTTCGTGATCACAGAACGGGAACCGGGATCTCCAGCATTCTGCCCTGGAGATATTAGAGTTTCTTTTTGTCAGCTCCTTGTAGCTGTTGATGGGGAATGGGGAAATCCACCAGGAAAGCTGATGTTTCTAACAGATAGGCAAACTTTTATGAACTTAAAGCCTTTAAAAAATTTTTACTTCTCAAGTTTTAATTGGCATGCAATGACAGGCTTTGCTTGTGTACAGCAGGAAAGTGTGTTTGCAGACAACAGATACACTGTACAAAAGGTAGCTAGTCTTTTTTGTGTTAGGCAACTTCCAGTTCTTCACGGCTATTTTGAGATTATATTTGAAACATTTTGTAGTTTGTTTGTATCTCTAACTTTCAAATTTCTGAGTGTCGTCGTTGTCATTGTCATCGTTGTCATTGTCATCGCCATCGTTGTCATCATCATCATTATCATCATCATCATCATCATCTGTAGTTCGAGAAGAAAGTTATAGCACAGTGCACGGTTCAGCTCCAGTGAAGATGAAGTGTATCTGTTATTTCGGTCTCTCACTCTCTTCCCACCTCTCCTGAACCCCTCATTGGTTTGCAGTGCTCCTTATAGGATCACACTACCCTGCTATTCCTAAGCTTGGGTTTAAAGATCCTTTAGTCCTAGGTTGGGAAAGTAGGAGAACTTGAATTCTGTCCCTAGAACCTATTAAAAAAGCCTGATGTAGTGGTGTGCTTGTAATTCCAGTGCCCGGGGAAGACAGAGACAGATGGATCCTTGGGGCTCACACGTTAGCTAGCCTGGCCTACTTGGAAAGCTCAGGATAGAAAGAGATCCTGTTTCAAATTAAGTGATACTTCTGAGGAATGACACTCAGGGTTGTCTTTTGTCTCTGCCCAGGGACAATTGTGCATGAGCATGTATGTACTTGTGCATGCATGTACACAATCGTATACACACCAAAACCAACAAACAACGAAACCTATAGGATATCAGAGTCGTTGTGATTGGAATAATCTAAAGAGGTGATGGCTTGTGGTAAGCTAGCCCCAGACTCCCTCTGAGAGGGTGTAGAGTCCTGCTGAGGAACCGAGGATTTTAGAGCACCCTGTAAAAGAAGTGTCTGTCATACAAGCCGTCTCAGTGTTGGTGGCAGAGTTGCAAACATCACTAGGTCCCTGGGGAAGCAGGTGATGTGGTGACTTTGGGGACACACAGTGTGGAAGGGACACAGAACAGGGTGGAAGTGAGGTGCCACAGGAGGGCTGTCCCAGTAGGAGATTCTGCCCCGAGGAGACTGACTTTCAGTTTCTATGTACAAAAGTAATCTTTTTAGCTTCATCTGAATACTTTGTTTCCAGGCTTCTTGGTAGTGTATTCTCACCTAATTAGGTCAGCAATAATGAGGTGCTTAGTTCCCTTCTCCAGTCTGTATTCTGGGAGCTGTCCAACTAAGGCCCTCAGGATACCTCAGAGACACGAGGAAAGGCTTTTTGCTGGGGAAAGGGGCAGCTGGGATTTAAGCAAGTGGGATGTAGGTTTGATCCTCGGCTTTGCCCCTGATTGACCGTGTGATCTCGTCAATCTTAGTCCAGTTTCCTCACCTGTAAAGTGGAAACAGTGCCTTTCGTTTGCAGACTAAATGAGACACAGGCTCAAATGAAGTAAATGTTCGATGCATGGCGGCTCCTGTGTTCCATGCATGGCGGCTCCTGTGTTCCATGCATGGCGGCTCCTGTGTTCCATTATGGACTGCCGGGCTGTTGCTGCTTTGTGTGTTAGTGTGTTGCAGGCTCCCAGATGAGAATCCAGCTCTCACAGCCTCTTAATTCAGCCCAGTCCTCTCTGGGAGCTTGGCATATTTCAGCCCTTTTGGTCCTGCAAGAACCTACAGAGAAGGCGCAGGAGGAGAGATGTCCACACATTCATTCTTTTTTTCTGAGTCTCAACTATGCATAGAGAGGACGGAAAAACCCACCCGTAAGACTTCAGTCTCTACAGGGAGAGCAAATTGTGTATTTTGTTCAACACTGTGCTCGGTGCTTGGCACACAGGCACCAAAAGAATTATGTAGGGGATGATATAAAAAGCCACCTAGAGGTGATGTCTCTACGTGAAGAAATCTAATATTTACACATTTGTAGCCTTGGGTGTTCTACCTGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAAAGAGAGGGATAGAATCTGTGTGTGTGTTTGAAAGAGTGTCTTTGAGTATATCATGTGTCTGTGTGTGAGTGTGTGTCTCTGTGTGAGTGTGTGTATGTGTATGTGTGTGAATGTGTGTCTCTGAGAGTGTGTTTCTGTGTGTGTTTGTGTCTGTGTATGAGTATGTATGTCTCTGTGTGTGAGTGTGTATGTCTCTTTCTTTGTGTGTGTCTCTCTGTATGTATGTGAGTGTGTATGAGTGTGTGTATGTATGTGAGTGTGCATGGGTGTGTGTGAGTATGTGAGTGTGTGTGTGAGTTAGTGTGTGTCTGTGTGTGAGTGTATGTATGTGAGTATGTATGAGTGTGTGTATGTATGTGAGTGTGCATGGGTGTGTGTATGTATGTGAGTATGTATGAGTGTGTGTATGTATGTGAGTGTGTATGGGTGTGTGTATGTATGTGAGTATGTATGAGTGAGTGTATGTATAGTGAGCGCGCATCGGTCTGTGTTTGATATGGACCCATCTCTGTCTAACAACTGTAGCTGTGTGCCATGTACCCTGCCTCGTGTGAAAGTATCTATATGTGTTCTTACAAAAGGGATCATGGAGGACTTTCGCATAGACTGGGGGTGATCTGTTGTGATGTTACCTTGGTCTAACAATCACAGGGCCTTACCCACAGGACCGATGCTTGGAGGACATTCTCCTTTGAAATCCAACTCAAACGTCCTTGTAAACACATCCAGGAGTACCCTTCTATTAGTACCCGAGTCAAAACGCCTCAGGGTCCCGCGATTCGGGACTGACACCACTTGAATTCTCGCACCAATGCTTTTTATACACCGCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAGGCACAGATTGTGATCATGGCATAAACCGCTCTGTCTCCTGTCCCCACAGATGGGTTTTATAGAATGTCAAAAAGACCAAAGCACAGTGCATAGCCTTTTGAGCCTGGCTTCTCCCATTTGGGATGCCCTCGTCGTCCCTCTGAGCCGTTGCCTGTGTCAGTGATTCTAAGAGCTCATGGGGGGGGGTCATTCCATTCTACTGCAGTGAGGTATTACCCTGGAAGCAGTGCAGCGACCTCCACCAAACCACAGAAGTTCCACCAGTGTCCAGTCGGAGAGACACGTTTGAGGCATTTGAGTTTCTTAGTGCTAGATAAAGAATCGAGAGTCTGGTGGTGGTGCACGCCTTTAAGTTTAGCGCTAGGGAAGCAGAGGCAGGGAGATCTCTTGAGTACGGGGGGGCCAGCCTGGTCTGCAGAGCCAGTTACAGGACAGCCAGGGCTACACAGAGAGACTTTACTCCAAGAAGAAAATCAAAAACAAACAAAAGAAAGAACTGAGGAATTTTGTAACAATCCCTAGTTTTTTAGATTTTCATTATCCTTGGCCTTAAAAGCAACTAATATTTCCAAATATATTTCTATTATTCTTTTATATTTTGATATTATGTATTATGATCATTTTCCTCTCATTCATTCCTCCACCTCCTCTCAGATCCATTCCCCCTCCCAACTTTACATCCTCCTTCTCTTTCTCTGTTTTTCTATAACCCGGTGTCCCATTTGTGCTGTCTTTATACTCATGGATGTGGGGCCATTCCCTGGAGCAGGGTCCACCTACCAGGGACCGAATCCCTGAAGAAAACCAACTTTCCATTCCCCAGAAGCCATCGGCTGTCAACAGTGGCTAAGTTAGGGGCAGGGACTTTTGAGCCATCCCTCGTCCCTGTTGGAAGTCTGACGGCGTGATCTTGTGCAGGGAACCAGAGGTGCCTTGGGTGAGTAGAGCTGTCCTGCCACATCAAGATGCCAGTACTTTACTTTGGTCCCACCCTACATCTGGCTCTTGCGGTCTTTCTGCCTTGGTACCAGATGTTTTGTGGTCAAATAGGACATGTCACTCTTGAGGTCAACGGGCTGGTCTCTACGCCTGGATCCATTCTGCCTCTCATGTATTTGGTAGCATCTCTGAAATACAAAACAAAGCAAAATACCGCCCCCCAAAACAAACAAAGCAAAACAAGTCCTTAAACATCACATTGCTACAGAAGACTACGGCTGTCCCTGCCACCCACTTCCCTGGCAGGTCAGTGAGAAAGAGTGAGGTGCAGATGCGTTCACCACGAGACAGTCTGGTCTGCCCAATTTGGCTCCCAATTTGTGCCAGTTTTGACAGTGGTCACAGTCAGAAAGCTGGTGTTTTCTCCTCAGACCTCCCCGCCCCCTGAATAAGTACAGTTGTCACACGTGTGCCGATATGTTTTTTCTTCTTCTGTACTTTAACTTGTGCTGCATGCAACTTCCTTTTCTGTAGAAAATTTTCTCAGGAAAAGAGAAGCAAGCTTGTGGTTAAGAGCTTACGTCACGCATGGCTTTGTGGGCTTTCATGCCAGTTTGCTGGAGGACTGAGCAAGTCACCTTATCTGTAGGCCTTCTTCCTGGTATCTCAGGCTGTGGAGTGGGGTGAAAGGGCCGATGAGGCTTCTCTCTTTTTCTTTCATTTCTTACCAGAGGAGTTTCTCCTTTAATGTCTCAGTGATTCAGAACTCCAGGCAAAGATTCTTTGTGACGTGAGAAGTCCTGAGGTTAGAGTTGGGCTTGACATATTGCACTAGAAGGGAGTTCCAGGAGACTGTCAACCCTCTTTGCTGATGAAATTCTTAGAGGCAGAAACCCTGGTGTGTGAGCTCTCCCAGATTAGTCCCTTTCTCCAAGTGTTTGTGAGGACTGTATTTGAGCCTCTCACCAGAGGTTGGGGAGTGCCGAGTCTCGCAACTTGGGAATTCTACACTTGAGAACAGAGCACGCTTTGCCCTGAGCGATTCCAGAAGGCCTTGGGATTGGCTGGTCAAAGTTTGGTTTTCTTCATTCTCTTCTATTATTATCATTGATTCACAAATAAGAATTCTGTATCTGGTGTGCAACATAATTTGAAATGGAAGCATTGGGAAATGGCTATATCGAGCTGTAGGACACACGGATTAGCTCACACAGCTACCACTTATTCCTGGTGAGAGACCTAAGCTGTCTGTTTACTTATTTTTTTTTTTATCTTATTTTGTTTTACTTTTTGAGATATGGTCTCTGTCCGTAACCCTGGCTGTCCTGGAACTCATTCTGTAGACCGGGCTGGCCTTGAACTCTGACCTTTACAGAATAGGAGGAAAACCAAGAGATCTATGTATGACATGGTGACTAGAGTTTTCAACAGTGTGACTTATACTTTAAAATTGGTGCTTTTGAAAACAGCTGGGCTTAGTAACTCACACCTTAAATCCCAGCACTTGGGAGGCTGATTTCTATTATTTTTTTTATTTCTTGAGACACTGTCTCTTTTAACCTAGGCTGGTCTTGAACTCACTTTTTTTGGAGGGGGGGTTCTTTTTTTGGAGCTGGGGACCGAACCCAGGGCTTTGCACTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCTTGAACTCACTTTTTAATGAGGCTATCCTTGAACTCTTGATCCCCTCTGCCTCTACACTGAGGTGTTGGTTTTCTGTGTACTACCAATCCTGTCTCTGATTTGTAATAATTGTTGCCAAACAATCTTCCATAAACAGTAAAACTGATCTGCCTTCTTACCAAGATTGGTTGACAGAGCTGTTCACACCACAACTGCCTGGCGCCAGACCATGGAGAGCTGTGTAGGGGTGCCCCTGAACTGCAAAGCTGGATACCTAGGTCACCTCCAGGACACCACTGAGCTGGGTGTGAAACAGAGCATCAGAGCATGGTACAGGCACGTCTCTTCTGTACACCGAGTGAGTCAGTTGTGGGTGGGACTGCCGTGAATAAAATCTTCCAGAATTCTAAAATGCAGCATTTGACCTAGACTTTAGGCCATGAGGAAGAATTATCCACTTGTATACCAAGGGACTTCAGGTCCAAGAATGTTATTTATGGCTTCTAGAGTATTAACGGTCTTGTTGACACCTTCTGGTTCTGAAAGAATATACATTATCAGGACCAATAGCATCTTGAAGATCCTTTAATCAAGTACAGAAAAGTTGAAAGGGAGTTCCTAAGAAGTGAGGGACCCACCCACATCACAAACTAGGTTAGTGACTGGTGAGATCTGGTCCTGGGGATTCCTGTTTCTTGCCAGGGTGACTTTCTCCTTATGTCCCATCATAGACAAAGGGCCTGCTAATGTGTGACCCTGAGGTAGAAGAGAGGTGCAATTATGGTGCTGGAAGCAACCGGGGGAAGGGAAATAGGGAAGATAACAGATCATTGATTGAACAGTTACCGTGTGACTGTTTCATATATGTTACCTCGCCTAAACCTCGTGCAGTAAATATTATGCCCATATTTGGGAGGCTGAATTGGTGGGGAGGGGAGGGGATAAAAATAGCTGTCTGGGCTTTTCAGAGTTTGTCTGATAAAGCTGGGTGGCCCGCTGAGTACTTGGGGGCAGCTGTAAATCTTGAGTAGGCATGTGACCCGGCTTTAAAGAGAGCCCCAGAGAGTTGGGCGCCACCTAGATCATAAGGTCTGCAGAATGGCACGGACTTCAGACCTCTCTGACTGACTACGCTCCCTACCACACCCACTCTGTCCCTCCAGGGCTGTGTTAGCTTTAGGTCACAGTGTTTGGAGGATGGGATTTTCCTCTTCATCCATGGCTTCCTAACTAACCCCTTCAGATGTGATAAGCAGACATGATCTGACTTCACTTGTAAAGGTAGGGTCCTAGTGGCTGGAGGGGGCCCTGAATTGGGATGTCCAGTAGTCAAACACTTTTCTAAAGTGGGTGTACTTGTTTAGGTTCAAATCCTCCCTCAGTTCTACATGCCTAATCCATCAGCAAGTCCTTGGAATAGAGTCTAGAGTCCAACCATACAATCAACACTGCTGCCCTTTCAATACAAACCAACTGTACCCCAACCCATCCATCTTCCTTCTGGCTCCCATCCTGTGCTTGGTGGTCAGGCCAAGTATTTCCCCTTCGCTTCGGCTCAGATTCCTTCAGCATCCCTACTGTGTGGTGCAGCCTGAGCTCCCAACCGAGTGCTGGTCCCTAGTTCTCCAGTCTCCCCTGCCTCTCTCCTCATTCTCTTTCCTCTGTCTTCCTGCTATTTCTTCCACAGGAGGAGGTCCGGCCATCCAACTTTGGCCTTTGTTCTTTGGTGAATGCTTCCCCTTATCCACTCTGTAGCATCATTATAGAAAGTCAACCTCCCAGAAGAACCTTTCTGTAGCCGACACCGGCAGACTAGTTTAGTCCAGACTGCTTTGCCTTGCTGTGTTTGGAAGCATTTGCCTCTGCTTTTGCTGTTTTCTTTTTTTCCCCCCGTTTTTGTTTTTGTTATCACCTTCCTGACCAAAACATGAGCATCACCAGATCAGGGGTTTGTCTAGTTTATCCGTGTGTCTCCAGTGCCTGGGAGAATGCTGAGTGTAAGTAAGTGCTCACTGAATGCTTGTTGAGGGAATGAATGAATGAGTGAATGAATGAGTGCCAAATTGATATACATTGGTGGAAAGTTTTAAAGCTAAAGGACCTCCTCTGACCTTACTCATGAGTGGATGGAACATGGCAAAGTTTCCATTCCAGGATGGCTTTTTATTGTTGTTCCAATTCGTGGAAGTACATAAGGACACACTGTTCATCAAAATAATGTCTCGTATGGCTATGGAAGTGAAAATCCACTTGGAATTAATTTCTTTGGGTTGTTGTGACCAAGTCCATAAACTGGTGACTTAGGACATCAGAAACGTGTGTCTGAGGTTCTGGGTAGAACCCATCTTTGCCTCTTTTTAGCTTCTAGTGGTGACTGGTAGTCCTTAGTCTTCCTTGCTTCTAGCTTTTTCACTGCAGTCTGTCTTTGATGCCATTTGGTGTCTGCCTTCTGCGTCTGTCTTCATGTGGGGTTTTCCCTTCTTACAAAGGCGTTGGTCATCTTGGTCCACACTATGACCTCATCTTGTTTACATCTATGTGACCAAATAAGGTCACATTCACAGGTACTGGGGGTTAAGACAGCAGCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCATAGGTGCATGTATTCAACCAATAATGTATTTTAATATTTACTCTTTTTTTTAAAAGATTTATTCATTTATTATATATAAGTACACTGTAGCTGTCTTCAGACAACACCAGAAGAGGGCATCAGATCTCATTACATGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCGGTGCTCTTAACCGCTGAGCCATCTCTTCAGCCCCTTAATATTTACTCTTGGTGGAGGCAAATCACACACAGTTTGTATTGTTAAATTTCACATTTAATTAGCTTGGATGCACTTAAGAAATGATTTAAAAATCTGAAACCAGATACCCCTGCACCACAGTCTTGGGTTTGATGAGACACTGCAGTCTAAGCTCTTTATTGATGGAGCAATGACCCTTGGAGCCTTTTGTGCTCTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCTCTCTGTCTCTGCTTGTCTCTGTCTGTCTCTGCTTGTCTCTGTCTGTCTCTGCTTGTCTCTGTCTCTCTCTGTCTCTGTCTCTCTCTGTCTCTGTCTCTCTCTGTCTCTTTGTCTCTGCCTCTCTCTCTGTCTCTCTGCCTCTCTCTGTCTCTCTCTATCTCTTTGTCTCTGTCTCTCTCTGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCAACTGATATTGGGGCATCACCCGTGGTGTTATCACATACGGTGAAGCATACAATCTTCAATGAACAATACCGCGCACGGCGGGTTGATAAACGTCAGTTAGCTCTTAATGAGGAGCAAGAGCGCTGCGCCTTGGCTCTCCATTCTACGTTCTAAGTTCTCTCGTTCGCAGTTCAGTCAGTTCGCTGTTCGTCGTCTCGCTTGTCTCGTCTCTCTCGTTCTGTCTCTATCGTCTCTGTCTCTCTCGTCTCTTGTCTCTGCCTCTCTCTCATGTCTCTCTGCCTCTCTCTGTCTCCTCTCTATCTCTTTGTTCAGTCTCTTCTGTCTCTTCTGTCTCTGCTTGTTCTGTCTGTCTCTGCTTGTTCTGTCTCTTCTGTTCTGTCTCTCTCTGTTCTGTCTCTCTCTGTTCTTTGTTCTGCCTCTCTTCTGTCTTCTGCCTCTTCTGTCTCTCTCTATCTCTTTGTCTCTGTCTCTCTCTGTCTCTTTCTTTCTCTCTCTCTTCCTTTGCTACCCTTAAGGGAAAAATAAAAACCAAAAATGTTCCTTGCAGCTTGTTCTTGATAAGCCACGCACGCGTGCACAGGGCCCTTAGCATGAGCTGTTTGGTTCATTGACTCACCCGCCCAGGAGTCTGCAATGGAAGATCAGGCACCACCTGGGTCACCCAATGACCCCCATGGACCTAAGTGGGAAGTGGCTAAATCTCAGGGTCAGGGCTGAGGCTCCAGGCCAGGAATTTTCTCTGGCAGGCAGCAAGAGAGATCTGCCTGGTGGTCATTAGCATGGACCGTGCTCCCTTCTCACCCGATCTAAGTCCTGAAGGTCCCTGGCCTCATCGGGGTGTACTGACGGCCCCTACATTCTGACATCCTGTGTCACTGGACAACATGTCCTCGACACAGCCCTCTCCAATGCATCATAACTTCCCCTGGTTCCAACTCCCTTGCTTCCTTTTTGCCTGTTTTTTTCCCCCACCCTTTATCTTGTTTCTGGTTCTGTGAACCAGGCTGAAAGGCCAGACCACAACCTCACGTTCCCACTTTCCAGGCAAACTTCTTGACTGGCCCTGCCTGTGTTTCCCAGTGACTGTCTTCTCTCAGCCACCGTTCCTAGATGGGGTTTTGAACGCACACCCCTTGCTCTCTTTAGATTTTCACCTCTGATACTTTGGCCCTCACCCTTGTAGCTCGAACCTTCTCTTCAGGGCATAGTTAGCTTTGTGCCCTGTGTCCTATACCGTAACTTTAAGGAATTGGGAAAAAAAATTAGCAAAACATTTGTCTGCTCTAAATAGCTCGAGGCTAAGGATAAAAAGGCAACAACAAAACCAACTCCGGTCCCAGCATTCATTGAGCACTTTATGTCCACCAGCTGTCGCATTCATCAATGTTCATTTAAGTTTTACGACAAGGACGGTCCTGGTCAACCTTGCTTGGCTTCTCTCACACAGGTTTTGGGGAGCCATCCATTGTTTTCTCTGACATTCTGGTGAGGACCCACCCCCACTTCCCCAGAAAGCCCTTCTGGACTACCGAGGCAGAGAAGGAATCCAGGCTTTATGAATGACTGAAAACAGAGGGTGGGAGGAGGCCCGCACGATCAGAAGGGAGGGGCAGCCTGGGAGTAGCAGGCCTTTGAATTAGCTTGGGCCCGGCTCAGAGACCTCTGATGAGTCAGCCACTTTCAACCACTGCATTCCAGGGCTCCTGCCTTGGCTGGAGAGGTTGTTGGTGGATCATTGGTTCTTCCACTATTAACCTGGTATTCAATAAAAATAAGACATCAAGGGAACAGGGTAATGGACTTCCTAAAAGAGCAGTTCAGCCCACCCTCTGAGGTCACTGACTGCTGGTACACTGGAAGGGGCCTGCTGTCTCTTATTTCACATTTGGCAAGGCTTTCTTTTGTGGCTGCAAGTCAAGGACTCATGGAGAATGGGTGAATGGTTGAAGGGGTAAACCGATAGACTGGGAAGGGTTTTGTGGGCTGGGCTGTTTAAATGGCTCAGGAAGGTGAAGGCGATTGCCACCAAGTCTGACAGGCTAAGTTTGATCCTCAAGACCTACACCGTAGAAAGAGGGGGCAGCCCTCAGGTTGTCCTCCGTCTCCACCCATGTGCCCATTCATTCTTTCTCATTCTCCCTCAAACAAACCCAATAAAGGTAGAAAAGAGAACTTGGCTATAGACACTGCTTTTCATCTTAACTCTTTCCCCTTGGGTTCCTCTCCTTCTAGTGAGCTTTGACGGTGGGTGTTTCTGTCCAGGATCACTCTTTGCTACCAGTCTCCATGGAAACTCCCCAAAGGAGTCTCTGTCCAGCCCCAGGGGAACAGCTGTGAGGCTAAGGTCTGACCTGACTGCCCTTGCAGGGAGAAGCCTTGGGTGGCGCTACTGATTTTGTGGGCTCAGAACCTGGCATCTGTGGAAAGATCAGCTACCTTTCCTCAGTAGACCTTGCATTGTTGAGAATTGCCCCCACTCTCATGTGCTGGGGACAGGCCTGGAGCCAGTGGCACAATTGGCATTTTGTAATTTACACACTCAGACTCTCTCACACACTCCACACTCACACCCAGACTCATACACACACACTCAGACTCAACACACAGTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACACTGAGACTCACACACACTCTGAATCTCTCTCTCACAAACACATACATACACATCCACACTCTTTCTCACACACACATTCACACACTCAGACTCATTCTCTCTCTCTCTCTCTCTTTTTCTCTCTATTCATATGTGAGAATAGAGCCAATAGTTATTCACCAGCTTGTGGCGGTGTCTCACTGGTCACATGTGGAATGGAAAAAGGCCTTGGAAGCAGGACAGAGCCCAGCCTCTGAGGAACCCTGGAGCTTTTAAACGGTGCTTCAAGGATTCCATGGACAAGCCAATGTCTTGAGGAGATGAGTGATGAATGCTATCATTATGTTATCTGAGGTTCCATTATATATTATATGTGTGTGCTTATCTAAATCTATACCTAGATATTGCAATAGAATCTTGCTATGATTGGCCTGCTACTTGCAATGTGGTCCAGGACAGCTCCAACTGGACAGTAATCTTGCTGTAACCACCCGACTGTTAGAGTTATGGGTGTGCACCACCAAGCCTGGGTCCGCAGGCCTTATTCTTAAACTCAGTGTAGAGTGTTTAGAAATCAGTTTGTTTGTGGCAAAATAAAACTATTTAGTCCCAAACCGTTCAGTTGGTGCCAGTACGTCTTTGGGCTGCTTTAGGCAGGCAGGCCTCAAGGGTCCAATTGATCTTTCCTTGTTTTTCTCCCTCCTTTCTCCCTTGCATCTTTTTTCCTTTCCTTGTTTTATTTCCATGCTGGGGGATGAAATCCAGGGCCACATGCATGCTAAGCATTCATTGTACTTGTTTTTTCAGCCTCTTAAAATGTCATTGTTAAAAGAGTGAAAGGTACTATGTTCATACAAACACACAAAAAGAACACACATGAAAGATTTTAATCAGTTTAAAGAGTGTGGGGACCGGCAAGGTGTTAGGACTAGTTCAAAAGAGAATTCGAGGAAGGGAGTCTTAGAGTCGGTCAGTCATGTGGAAATGACTTGGCTAATAGATTCTTTAAAAATTGGCCAATGCCTGTAAGAACAATAACCTTTAACCTTCGGGGCTCATGCTCTCTACCAGGTAGACACTGCTGACATTTTTGTTGGATGAGAATCATGTGTGTTTCTCTCATAAAAATAGATTTACATCATCATCAATCTTCTGTGTTAATCTCTACTTGTGCAAAGTTGTAAACCATCCTAATCAGTTCAAGACACAGGCGCAGATAGTCTCTGACCAAGGTGCGGCATTTTCTGAGCGTGTCCCTCTCAGCTGTCGAGGTAGCTAGATTCATCAGAATGAAGGATGTTTGACTAGATGTAGATGTTCTGGAGATATTGAGACAACACCCCAGTAATTAGGATAATTTATTTGTAAATAGATTTGCTGTGGGCAAAGCCAAGAGGTAAGAGTATTGGGCAGAGGAAGCCCTTCAGAAAGTCATGAGGGACTGTCAGGCTGTGTCTTCCTGCTCCAGGGTGATTAAAGACCTCCCTGAGGCACAATAGGCAGAGATGTTTTATTTGTCTGAGGCCAGGGACACAGAGCCAGGGGAGAGGCTTCCACAAGAAGCAGCTGCCTGGGGTTCACTTCCTGGCTGCATTTCTCAGCGCTATTTTGGTCTCTTGGCTGTCCTTGCTCCCCACTGCAGTCTTCTCTCTGCTGTTTGTCAACACAGACTCTTCACTTTTGAGTGGCATCTGAAAGCCATCCTCTTGGCTTATTGAATTTTTGCAAAACTCCTCAGAGATAGGTCAGTCATTTCACAGAGAGGAGGTGAGCTGCTCAAGGGCACGTCGTGAGGCACAGGCTTTGCTTCGGAATGCCTCAGAAGTGCCTGCCACGTTCTTCCAGCTTCCGTGTGTCTTTCCTGAGCTCTGGTTTAGCCGTTCTCAACCTTCCTAATGCTTCGGACCTTTCAGTACGGTTCCTTGTGCTGTGGTGACCCTCCCCCAGCCATAAAATTATTTTGTTGCTACTTCATAACTTTAGCTTTGCTACTAATGATCACATCATAACAGTAATATCTGTATGATCATTTATGTACAATGTTATGATATGTCATATACATGTCATAACCGTAAATATCTGATATGTAGGATATCTGATGTGTGGGGCCAGGGGTCGCGACCCACAGGTTGCGAACACCTTTCTAGTTCTTTAGTGCATTGAATGTTTGGTCCCCAAGAAAGATGTATTGGAAGCCAGAGATGAATTCAGACGGTGGGACACGGCCATTATGGTTACCCTCTGCTTCATTAAAGCCCACAGCTTTTACATGTTAATCTTACGAGCGCCCTAGGTCTCTGTGTAGTGGCTGTGACTGCGACTAGACAATTGGAGAAGGCCACAGGACGTTAACGCTGGGTCTTGGGCTTTCATTCGCCCAGTACAGGTATAAAAACCAGTCACTGATTAAAGCCTTTCTATCAGTTACGATGGAACGCTGGGTCTGTTACTACAGTCTTGCCAGCTACTGCTGCTCTGGCTTCATGGCGCTGATAAACGGAGTGAGTTCTCCCTCATCTCTGTGTTTTCGTTCTTGTGTATGTAGCCCATGTTTGGTAAATGTCTAGGTGGTAGGGGTTAGGGGCGTTTGTATGTACCTAGGAAGTGTTCAGCAGAGTGTTTGGAAATTTGGGGTAGTCGGAGCAGGACGGTCACTGCTCTGGCGCAAATCAGGTGCTAATGTCTATGCCTCTTCATTGCGA
Seq C2 exon
AGTCCAACATCTGTACCACGAGAGCGGGTGACACTCCTGCCAGCCAGTGTCTGGCCGTAAGTCCCGTGTGTGCCTGGTGCTCAGATGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000048449:ENSRNOT00000073350:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.029 A=NA C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0036213=Integrin_beta=PU(3.8=53.3)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]