RnoINT0091224 @ rn6
Intron Retention
Gene
ENSRNOG00000013933 | Med27
Description
mediator complex subunit 27 [Source:RGD Symbol;Acc:1564993]
Coordinates
chr3:8041821-8056798:+
Coord C1 exon
chr3:8041821-8041862
Coord A exon
chr3:8041863-8056720
Coord C2 exon
chr3:8056721-8056798
Length
14858 bp
Sequences
Splice sites
5' ss Seq
AAGGTGAGT
5' ss Score
10.47
3' ss Seq
GTGACTGTTCCTCATCCTAGGTG
3' ss Score
9.35
Exon sequences
Seq C1 exon
CTAGACATATGGTCCAAATCCAGCTATCAGGTATTCCAGAAG
Seq A exon
GTGAGTGTTCCTCTCTGTCTTATTCAGCTATCAAGTATTCCAGAAGGTAAGTGTTCCTCCCTGACTTATTCAGGAGACATGGGTAAACTACAGATGCCTTGGTTATAAACTTTCCCAACTCGGAGGCTTTTAAAAAGTGAAGGGGAAAATGAAGGGTTGGGGCTGTGACTCACTCAGTCAGGGTAGAGTGCTTGCCTCGAGTGTACAGTGCCCTGGGATCTATCCCAGCATCACATAAAGTGGACATGGTGGTGCACACCTACAAGAGTGGGGGAGGGTGACCTGACATACATTTATATGACATGGGGAAGCAAGTAGTTTGGGGATGTACCCGAATTGCCTGTGGGTGGAGCAGGGGAGTAGCCTCAAAGGGATACCAGAGGGTGTGTCAGTGATGGGCATACTTTGTTTCTGAGGTAATAACGGTGGTTAGAGTACTGGAGCCCAGAGGTTGTTTGCTCACAGGGAGGACTTACTGTGTCTAGGGTAGACTATATCACGGCAGAAACTTTCAGATGATTTCAAGCTTTCCCCAGTGTTGAAATGCAGTTTCTCAGACCCTGTGGTCACCCAAAGGCATGGAGATGGGCTGAGAGAAGCAGGCAGCCTGCAGCCCAGCCTACTCTACTTTGCCTCCTGCCCCCATGACTTCTTTGGCTCCTTCCTGGAAAAGATATAAAGAACTGTGAAGAAAACTGAGAAATGGGGCTGGAGAAGCTTCCCAGCTTCCATAGAAGGCTCACAGACTACCAGTGCCAGGATGATTGGGTGTGTTCTGGCCTCTGAGGGCAGAGGGCTCGGCACACACATGGTGCACAGACATAGATGCAAGCAAAACACCCGTACACATGAAGTTACATTTAAGTGGGGTTTATGTGAGCATTCAGTTCCTCAGCTCCAGCAGGGTGACACTCCTAACATAGCATGGCCCCACGGCGTGTGTGGGTTCACTGCACACCCCAGAGCACTTGGGCCAGCTTCCCCGCAGACAGCAGCCCTGTCCCCTGTGCTCTGGACTGGCCCGACAGTTGCCATCTCATCTGTCCCCTTGACAAGGACAGCAGTGGTTCTGTACAGCACCCTTTCCTGATGCCAGGCCCGGGGATACCAGGGAGATAGATGACACAGTAGAAAGGCTGCTGAGGCTGTGCCAGACGACCAGAGGAGGGACGGCCTTCAAACCCAGTGCTCGGGAGGATTCCATGGGGAATCTTAAAGAGCCCTGCTCTGGCAAGTGTCTCAGCCTGGGGACAGAATGTGGATACTGTTCTCTGGTAAGAAATACCTCAGGGACCACTCAGAGCTGGGACACTTGGCCCAAGTTCTTCCAAGTTGTGCCCAAGGTGTGCCAGGAGGCATAGGCTTTTTTTGTTCTCTTAATTAAAATGGAATTTGCATAATATAAACTGAACCATTTTAAAGTGAACAGTTCCTTGGAGTTGGGTAACGTCGCTTGTTTGCCTGCCTTCTGTCTAGATCACCAACATTTCACCTCTACAGGGGAAACCCCTTGCCCAGAATGCAGTCAGTAGAGGCCATGGTGGCTACCCTCTCAACACTGTGACCAGTTCCATTTGCATTCACACCCACAGCCTGAGGGAGTCTCATACACAGCAACATTCAGGAGTCATGACCTTGTCCACCTGAATAAAGTGTGCTGCTTTAAAACAAGGCTTCCCTACATCGGAAAAGCCAGCAGCAACTAAACCAGAGGCAGGCTGTTAACAGTAAGGATCCAGCAGGGAGACAGAGTTCAGAGCAGAGGGAAGGATGCTGGTACCCAGCTCTCTTCCTCCTTTTATCAGTATGAGACCCAACAGTTGGAATGGTACAACCTACAACTGGGAAGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAGAGAGAAAGTGTGTTTACATGGTGACTCTAAGCCTGGTTAAGTTGACAGGAATGAGCCGCCACAGGTATCAGGGCTTTGGAAGATGTCACCAGTGCTCTAAGAGAGCAGTTGGCATGTAAGGTGGAGTTAGGCTAGCTGACCAAGTGTGTACCTCAATAAGGTGACTTAAATAGGATCATCAATTAGTATGGTTTGAATCTAAATTGTGTTCCATAAAGGTATGTGTTTGAACTAGCTAGAGGCACTATTTCAAGAAATTGTAGGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCTTCAAGGTCCCGGGTTCGGTCCCCAGCTCCGGAAAAAAAAAAAAAAAGAAATTGTAAAACTTGGGGGGTCAGGCGTGCCTGGAGGAAGTGGGCTGCTGCAAGGCAGGCCTGAGGTTTGTGCTTCCATTGTGTTCTGGGGAGAAGTGAGGAGGTGTGGGGTCCCGGCTGTGCACTCTGCAGCTGAAGAGCCAGCTGCTGCCATGCCTTGCTCTCCGTGTGGAGCTGTGCCCTCAGACTGAGTCAGATGAGCCATCTCTCCACTTTGCTGGGTTTTGGTCACGGTGCTGAGGAAAGTAGTTATAGCGGGGTCTGTCTGGGCCACCTGTGCAGTTCTTGCATAAGGCTCAAAATATTTCAAAAGCAAGAACACATTTAACTGAAACTGCCGCTGACCTGGTCTGCCAGCATTCCATCACCCCACTGTCGCTCCGGCCCAGAGCTGAATGGAAGGAAATGTGAATCCATGCCCCGCCTTCAGGGCCCTGGACCTGTGCAGGCTCTGCATGCTTGCTAAGCTACCAAGCTGGAGATAATCACATGGTCGGCGTGGCTGGCACAAGTGCCACCTCAGCTATAAACATTAGCGTTTTCCATGTTGTTCTTGGCATGTGACCGCAAAGAAAAGAAAACCACTCATTTCCAGAAGAGCCAGCATCATTAAAACTAGTGTTTGTCTTCCCTTTAATCTGGTCCTTACCTCTGGGCCCTCTAGGGCATAGTACGAATTTCTTCCCCAGGCCCCACAGTGGCCCTCAGGACTTCTCAAGCCCACAGCCCAGCGCCTGCAGCCCAGAACCTGGCCTTTAATAGGGACCCTCCTGGGAGTGGGGCCTCCTCGCCATACTTTCTTAAAAACTGTTCTGTGCCATGGGATTCGGTTCTCTGAGGGACTCAGGCAGAGTGTGGAATGGGGATTTTCTAAAACACAAATTTAAACTGTGCTACCATGTTTTACCCACCCTCCCTGGGAACCACCTGCCACACAGTCTGAGTGCACAGACACAGGGCAGAGTCTGAAAGGGACAGTTGGAGAGATGCATGGGCACCCGCCAGTCTCCCGTGCACTTACATGGCCTGTGTGCAGTAGGGAGAATGGGCTGACCCACGTGGTGGTGCTTTACCCACCTAAGGCAGTGCCCGGACACTGGGCTCTTCCACCCTCTCCCTTGCCCTAATACATCTAAGCAGTTAACCGCTAGTGCTGACCTTCCCTGGGCTAAAGACTGCCACCGCACGGATGTCAGTGTTCTCTTTAGAGGGAAGGTAAGGTCTCTGTCTCCTCTCAGGGGCAAGTGAGTGCCTGTGGTGTCAGGTGGAGAGGTAGCTGAGAAGTAATGTACTACAGAATCCAGCCCAGTCCTCTCAGTACAGCTTCAGCTAATCACGTCCAGTGCCATGGGTGTGGTGTGATGTCACATCAGGGAGCCTGTGTTCCAAGCTTGCAGAAGGGGCTGGTGGTGAAAGAAGGTGCCTCTGGCATCCTGTCCCAAGGGCAGGGTGTGATATCCTGCTTCATTCCCTTCCCACAGTCGGCCCCACATAGATGGCAGAGCGGAGGACACTCTGTGCAAGGCTTGTCTGTCTTGCAAGCCTTCTAAGTGATGGTTAGGGTTGGGACTCAAAACCCCAGATAACAGGGCTGGTCGGCTTCTAAGCTTTGGCTTTTTGGGACCCACCCTTTCTCACCTCTGTTCTCCATAAATATGGTGTGTGCTTATTGCTGCTGGTTGTGGACACCGGCAGCGAGTGTGGAGAGGGCTCCTGCACCTGCCTGCCCAGTAGGCAGCCAGCATGGGCTAGCCCAGGGCAGTAAGTTCCCATGGAGCAGGTTGGCTCACTGTCCCCTGTATGAGGGGACTTCACTGGCAGAATCACCCACCTCCCGACGAGCTTGACCTCAGAGCAGATTGCATTAGTACTCCCAGTTCTGCGTTGAGACTCCCCGGCCACTGAAGGAGCTTGCACCCTACCCCTACCACCCATTGTCCTGAGGGAGGGCCCCTTAGGGACTGGACTGACTTCCTTTCCTCACACCATTGTATTGCTTCAGGTGCCCTTAGGAAGGCAGGAAGCCCCTGAGCTCTTTCCCTCTGGATAGGAGGGGACTGGTGCCTTGTAGAGCCAAAGCAAACTTACCCTTGTCTTTTTACTTGAGGAGCCAGGGCAGTGGAGGGCAGGCCACTGTTACATTGTCCAGAGGCTGGTGCTCAAGTTCCTCAGTCAGAGCCATAGTCCCTGTGGCTCTATAGCAAGCCAGTCGTGAGGAGGGAAATGCCTGCCTTTTGTCTGAGGACACTGACTGTCAGCAAGTCTTTTCCATCCTACTCATTAGACTCTGTACCCAAGTGCGAGGCAGAGGCTGCTTGGGGGACAGCTTGCTGTGAGGCTATGACTGCCAACAGGTGCCTGTCATTTACTGTACTACCCCAGAGGCGCCTTGCACTTCATCCTAGGGCGAAGTGGCTTTTTATAGCCAGTGAGTTTCCAGCAGTGTGGATTCAGAGAATGAAATACAGAAATAAGGGGACCCTCTGAAAGGCCAGAGACACAGAGCCAGCAAAAGCTTCAAGCAAGTTCACATTTTCCTGCCATTTAAACTCTGCTGGGGCACTCACTGTTTTGACCTTTAACCCCCTCATTTCAAAACAGTGTGCATTTTTTCCCAGCGTCTTGGGAGGAGTCTGCAGCCACTCGCTGCATGAAGTCCTTGCAGGGGCTAGAGAAAGGTGAGAGAGCACAGAGGCCCCAGGCAGGCAGGGTGGGGTGTAGGAAAAGATAGTCTCTGAGGAGCCAGTGTCCCCTCCTGGGGGTAGGAACAAAACATAGCCATTGGCCTCAGAAGTCCACTCTTGGCCATGGCCATTGTTCCACAGGCAGCAGAGCCCACCATGTCCTGCACCACAGTAGGCAGCTGAGGTGCCCGTGGGGTGCCCCTGCCCTCTTCACCTTTTCCTTCACTTGGCCATTCTTTGATGTGAAAGACAAGGCCTTTCCTGGTTTGGTCTCTACAGAGACGCCACTGAGTATCCCTCAGGCCCTTTACAGGAGGGAGGGCTGAGTCAGCCCAGGAGACTGTCATGACTCGGTGCCTTCCCACAGTGCCCACATATCCAGTCGTTGCTAGCTCCAAGTCCTCCAGAGGGAACCATCCCACACAGGGAACTTCCAGAGGACAGAGCCCTCCTCCCACAGTGAGGCTGACCTGAGCACTGGCCCCACTATGGCACCTCACTTCACCAGGAGGCTCACACACTCTGAGCCCCTGGTCTCTGAGTTCCCTGCCAACCCTTCTCTTCAGAAAAAATAATTCAACCGAGACCGCTGGTCAGGATGCCACATCTGAAAGCCTAGAGAGAGAAAGGTTGTGGTGAGAATCCCAGGCCACACTCTATCCAGCCCTTGTACCAGAGAGGTTTCAAACTTAAAGGGACCCTCACAAGTGTGTCCCAAATGGACAGAGCTGAGGGGAAAGCTTTCACAAGGACAGATGTTCCTGATGGTGGCACACAGGAGGAAGGTGTGTGTTTGTCTGCGAGTAGGCTGTTGAATTGGAGGAATGAGAGAGAGGCAGAGGATTCCTTGGTCATCGTAGAGGGTGCTGTGCCCTCAGCCACCAGCTAGTCTAGACTGATTGGGCTTGCTAAACTTCCACCCAGGCCTGGGAGCCAAGGGAAGGAGGAAGAGGTGTTTGGGCTGAACTGGCTGCCAAGAGCCCCAGCCACCACCTTCCCTGAGGGCTGGTTCACACCCACTCTTCCCAGAGCAGGTTTCCTCATTCGTTTGCCTCTTATGGGCCTGAGCCCCTTTCCTTCAGGCTCCCTGCTGGACACAGCTCAAGTACTCACATGCACCCAGCTATGTGTAGCAAACAGACCCAGGGAGGCCTAGCCAGCCCACTGGCCTCTCTGGTATGCTGAGTTACCCCATGCCATTAGAGGGGTCACAGGGCAACCATTCATCATCCCTTCTTTCTGGAGGGAAGGGACACAGGACAGGCCATCAGATCTGACAGCTGCTTCTGGGAAGACCGGCTCCTCCCGCTCCTGGACCCCTTGCCCCCATCCCACAGCTCAAGTTGCCAGCACTGCGGTCACACTCCCTGTGAGTGACTGCTCCAGCAAGAGCCATCTGCAGGTGGTCAGAGCCTGGCCATGCCTCCTCGGTGTGCTCATCTGTATTGGAGAGCATGCCATGAGGGGAACTGATACCATAGATGGGACATAGAAAGTAACCGTCGTGTAAATGTGATCCCTGCTGCTCTGCCTCCAAAGTGACCTCTCCTGAGGAAGGCCCCTCCATCTCCTCTGCTCCCTATTGGCCAGCTCCCTGCACAGGGCTCCCGGCTCCTCTCCACAGCGGACCGTGTGGTTCAGCGCATGGGCTGTGCCCTGTACTTGCTGTGCTCCGGCCAAGAGTTTGTCCTGTGTAGGTTCAGCTCCTTCCTCTGCACAAAGGTGAAACAGATCACACCTCCTTCATGAGGTGCGTGATGTGAAGATCATCTGTGGGGAGTTCTTGGCACTAAACTTTCCTGGCAAGGCTGTGGCATGTGCTACTGCTGCTGCCTCTGTAGCTCCCACAGGATGAGGACCACAGAACCTGGAACTACAGCTATCTATGTGCATGTCTCCCCCACTCCCTTTAAAAAAAAAAAAGAAGCATCGCTTTAAAAAAAAGATTTATTTATTTCACGTATGTGAATACACTGTTGCTCTCTTCAGACACACCAGAAGAGAGCACTGGATCCCACTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGAGCAGTCAGTGCTCTTAACCGCTGAGCCATCTCTGCAGCCCGAGTATGTCCCCATTTTAGGGAGGGAGGTTTGTAAACTAAACTCAAGCTCCATCTACCATGGCAAGCCCAGTCAGTCCCACCAAAGCCTCCTCCATCTTCTTTGCCCTGATATTGCTTTCCCTGGCCAAAGAGTGGGCAGCTTTTGTGTGAGATACAAGAATTAAAGCTGCCAGCTATACCCGCTGAGCAACTTGACAGGCCAGGACTTGGGACAGTACGTACTGTTCTGAGGGCACACCTCCCTCCGGTGGATATATATATATATATATATATATATATATATGGCCTGCAGTGGACACACTGTCCTGACTTCACAGTGGCCAGGGCCTTGTTGCTGCATGTCTGATGGAGAAGTGGATGACTATGTCAACTCCAGAAATAACGCAGCATCAAGGGAAGGTGTCCCCAGGATAGGACTTCGCAGCAGCCAGCCACAGTCTGCCATTTTGCCATCTGGAAAGTATTAAACTTTTTTCATCTAAAGAAGAGCCTTGGGCTGGAGAGATGGCTCAGTGGTTAAGAGCACCGACTGCTCTTCCCGAGGTCCTGAGTTCAAATCCCGGCAACCACATGGTGGCTCACAACCATCTGTAATGAGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTCATATATAATAAATAAATAAAATATTTTAAAAAAAAAAGAAAAGCCTTGATTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATCTTTTTTTCGGAGCTGGGGACCGAACCCAGGGCCTTGCGCTTCCTAGGCAAGCACTCTACCACTGAGCTAAATCCCCAACCCCGAGCCTTGATTTCTTAATCCTGAAAAAATATCAGGGACCCACCATGTGGCTCTCCTCAACCCTGCTGTGTGAACTAGCACAGTGGTCAGAACCTTGGAGAGTTCCCGGGCCCCATGAGGCCGGTAGCATCCCTGCCAGCTCAGGCTCCTGGGCTCTCTTCCCATCCCACACGCTGCCTCCCTCCCTTCCAACTGCCTGGGGCCTTCCCACTTAATCCCTTAGTCTGGATCCTACCTACTACTATGTTTGTGGTGACCAGTACAGAGACATACTGCTCCGTAATGTCCAAAGCTGGCCCAGGGACAAAAATGCAGCCCAGGTGGCCTCATTCCCAGAGTGCAGCCTGGAGATGGAGCATCAGGTCACAGGCCTGGACACAGTGCCTGACTCAGTTACCCAGAGGGCTATGAAAGTGCACACAAGGGAACTAGCCTAAGCACCAGGTAGCAGTCAGAACAGGGAGCCACCCCTAGACTGAGTGCCAATACTGGAAAGGGCTTAGTGAGAGAAGAGCATTCCAGACAGGGTCAGACAGCAGTGCTGGGTTAGGCAGGCTCACAGGTCACAGCATTGTCAGCCATGAGCTGAGAGGAGGCAAGGCAGCAGTCTATGCATGTTTAAGCATGCAGCCATCCGTGGAGGCCATCTAGTCTGCTTGGGTACCGGGAATTGAGAGCTTCTTCCAGACTTGGGTGGTGTCCTGTCTGAAACACTAAAGGGTTACGGTAGCCTGCCCCACCCAGATGCTCACTTTTGGAAGCCCCAGTTTGTGCCTGCCAGAAACTGTCTTAAGCAGATTGCATCCACAGGCTCATACTTCTCAAATGCAGGGCTTGATCTCAGAGGTGTGTAAGGGATTTGAAGACTGATGGAGCAGCTGGGTCTGTCTCCACCTCTCCTCTCTGACCTAGCTAGCCTGCTGATCTTGTCCCAGAAGTCCTAGACCAGCATGACCTGGCCCCAGTGACAACGATAAGCTCTTCAGAGCCCATGCAGATGGCGCGTTCATCACACAAAGCAGAATATCGATCTTGCCTGAGTAATCCCCAGTCCCTGTGGGCCTCCGGGCTTCCTCTTCGGGCCCCCAGGCCTGCTGAGCCTACGGCATTAGAGACTAGGGCTGCATAATAAGTGGTAAATCCCCTGCTTCCGCCCGCAGTGCCTTCATCCGTGTTTTAGAAGCTTCTGTCTGCAACACTCCCCTGGCCCCCAACACCACTTTCAGGAGCATTCCAATTTTGAGATAATGGTGACTCCTCTTTTCATAGAATGAAGACTTCTAAGGCCGCCTTCAGCATTCATCCTGAAACTGGCGCAGGGATGCTATCAGGGCTGCCGTCTCTTTAAGCCGTTAACACACCATGCTCCCATAGCTGGCTCCAGAGCCCACAAATCATTTACACCTGAGCATTATTTGGGGCTTACCCTGTTAAAATTGTTGGGGAGCCCCAGATGCCTGGGCTGGCCCCTCCACACTGTGAAAGCATCTTCACCCTCCTAATACTGCTTATACTTCTCGATGCTGGGGCAAGGCCCATGAGTGGCACATTCAGTTTGCTGCCAGCTCAGTGGTGCTTCCAGCCTTGGTGAAACCTAGAGCTAGGGAGAGGAGTTAGCAAAACCAGGGCCTTGTAAAGATGGCGTCATATCAAAGCATCAGGTGGACACCTAGAGCGAAGCAGAGACACAGCACCTCTCTTGCTCTGGCATCTGCCGCCTTTTTTTTAATTGGTGGTCACTGGCATAGTGATGCACACCGTTAGTCCCAGCACACAAGAAGCAGAAGGAGAGGGAGGAGGGTTCCTGTATGTTTGAGGCTAGCGGAGCATACATCATAAGGTCCAGGCCAACCAGGGCTACAGACAGAGTAAGAGACCCTCTCTTTTAAAAAAAAAAAAAAAAAAGGCTTTAAAGTCACCAGGGGAAGGGCCATCTGCCCTCATTCAGGCTCCCCATTCCCCCAATTCACATTCCTGTCTACCTTTGCAGAATGCATGTGGAGGCTGGCTCCGCCTTGAGGGAAGCCAGAGACCAATCACCACCACGGTCTCTTTTAAATAAGCCTGGCTGTAGTTTCTTGGGTACTTCCTTTTCCTTTTTTATGAACCTTACAGGGGAATGCTTTTAATAGCAGCCCTAGCTTGCCAGGGACAGCCTCGGGCACTTGGCTTTGTGGGTAAATGACACTGTCCAGTAACCCTTGCTTTAGAAAGCATGGGTTGGGGCTGGGGATTTAGCTCAGTGGTAGAGCACTTGCCGAGCGAGCACAAGGCCCTGGGTTCGGTCCCCAGCTCCGAAAAAAAAAAAAAAAAAAAAAAAGAAAGCATGGGAGAGAGGATTGTTGGAGGCTGAGGCCAGCTCACCAAGGGCTGCTGTCCTGCCCCCTGGTTGGCCGGGTCTCTTAGGCAGCACCCTTCCACAGCTTCTACACACTGGGCCTGGTTCCTGCAGGTAATGCCTCCCATTAAGAGGTTTCCTGAGCCCCTGAAGACATTCAGGGTTCTCTTGCTCTAGAAAAACAACCACCCCAAGTTAGAGCCGTGTGGAAATGAGGTAGGGGAGGAGGAACGCACACAGCCGAGTATCCCTGCTCCAGACCATGTGGTTGTTCCCACCCCTGACTGCTGACGACTGTCTTCATCTCTCACTTGCAGACCCTCCCTTTCAGGGGAGCTGGGCAGTGATAGTCTTAAGAGCATCCCCTCTCCTCTTTTCCAAACCTTTCCTAGGTCACCACTGTGGCCTTTGGTTTTCCCCTTGAGGGTAAGTCACTGTGGCACCTGAGCTGGAGGGAGGGGCGTGTCCCAGATTCGTCACTGGACAGTGGAACACTTGCACTACCACCAGGACCCCCAACCCTTATGCTTCGTACTTCCTCTGAGACACTTGTACTGCAGCCTTCGTCACCCCGCTGCTCCCATGTAACACAGGCAGGAGATGAATTCAGTTGTCCCTCTGATCAGTGCAGTGGGGAAGAAAAAGCTTGTGCTTAGCAGCTAATAGGCAGAGGCTCTAGCAAGGAAGGAAGGCACCATGTCCAAGGTTTGGTTGTCCCAGCCCCCCCCCCCCCCCGGGAGAGGAGAGAGCCCATGATTTGGCACCACTCACAACACTTGTCCACCCAAGAAGTCTTCCAGTGGAGCCTGCCAGGTCCCTCCCTCAGGTCAGGTTGGTTTGGCCTGGACGAGCCCTGCCCTGCTGCATGGTATCCACTTAACCTAAGTCCCTTGAGCACCCTGTCATCCCTGACTTGCAAATGGCACTTGGTCGTTGATGTGAGGTTGAGTGAGGTCAGATGCTCTCCCTCTCCTGACCCATGGAATCCATGCCCAAGATCATCCTACTCCTAGGAAGAGCAGTGAGCCTGTGGCCCAGAGGGCTGCCCGCTTGCGCTGCCCCTGCTGCAGCTTCACTTGCTTTCTTTGTGGCTAAAACAGCTCCAGCCTGAAGGGAGGCTCAGGGCACTCTGCACCTCAGTATGGCAGAGGAACTTGGGGAGACTGCTTTGACTGGCAGCCCTCTCCAGAGTGTTGACTGGCAGCTGCTCCAAGGTCTCCTGAAAGAGTCTTTCTGCCCCACCCACACCCCCACACCGCTCAGTTCTCCTCCATCTGGGTTCACAAAGACTTTCACAGCCTTGAGCTGAGGCAGAGGGAACTTCAGTCAACCCAGCCTGCTGTCTTGGCTCTCCAGATGGGGACCCACCAGGATCCAGGCTGGGCCTCTGGTTTCCCCCGCAGTGAGGGGAAGCAAGGCTTCTGGATCTCCAGCCTAGCACTCCCCACCCCCCAGTTCTCACTTTGCACCCATACTGCCCTGCCTAGTCCATATCTGTCTGTAGTGTTGCTTTGCGTCCTTCTCTCCCTCCTGCTCTCCCGAGGTTCCTGGCACTTTGATGTTTTCCAAGCTTTGTTTCAGCCCAGCACTCAACCTGCAGGCTGGGTGTCCTCCTTGGCCTTGGTCTCTCAGGAGCATTAGTGCTCTTCCCTCGCTCCCTCACTGCAGGCTGCTCTTATCTCCAGGGGAACGTCATTAGCTTACAACACAATGGGCCTAACCCTAGGGCCTCACAAAGTTAGTTAATAGCAGTCTTTTGTTACACTGGCATGTTTTTTCTATGTCTTCAATGCTGAACACAACACAACTTTGTGGTTGAAAGTGTAAAACTTTTATATATGCATTCACACACACACACACACACACACACACACACTCATTGAAAGTGGAATAATTTGAGGACTAGGGAGAATGCATGGGTAGAGCTTTGCTCAGTACTGGGGGTTCAGCCATGGAAATCAGAAAACTGGGAATGGAGCTGGGGAAGCCATTGGGGAGACTCAGAAGTCAACTGGTTTTGTTTCCTTCTATTAAAATGTTGCTGAGATTGGTGGTGGGAGATTGAGAGACTAAATGTCCAACCACATCAGTTACCAGAGCAAAACCTGCCACCGTTTGGCAGTTAAAGAGTGCTTTTAATGGGACTCTTTGAAAAGAAGGCTAGATTTAGCCAGATGGCAGGCCAGGAGTGGCCAGACTGATGAGGTGCCCTGCCTGTGATTCAGATGCCAAGTAGAGTGCCTGGCTCCCCGTATCTGCAGACAATCATTTCTCATTAACTCGGCCGGTCCTCTTGGCTAGCCTGCATACCTCAGCTGCACATACACGCCTCTCCTCCACCTCGCTTGCAAGACCAGCTTTCAGACTCTTACCTGGACCACAGTCTGTCGAGTGAGGAATCAGGAGCTCAAATAAAGCTCGAGAAGCCAGATCAACAGTGGGGATAAAGGGCCTAGGTTCAAGGCTTGGTGCATTTTCAGAGAGAGTCCTGTCAGATTTGGCTACAGGTCCCAAATTTCATAGGCCACATGGGCCAAGCAGGTAGTGCAAAACCATGGGGCATGGCAGGGGCATGCCCATTTAGAGACACCTTTCTCTGCTCCCAGTAACAGCAGCCACCAGACAGGGACTCACATGCTTGTGGAGATTAAGAGTGGGACACGGACCCTCTCACATGGTTACCTGGGAGGATGTCTTTGTAGCTTCTAAGGCTTTGAGAACTTCGTGCGGTGGCCTTTTGTATTAACTGAGAAGAAAGAAACACAAAAACTGCATCCAAGCACACAACGTGCCTTGGATGTCACCTCTGGGTCACTGGACTGAGGCAGGCCAACTCCAGCACTTGAACAGATGGCTCTGAGTCCTCCAGAGGGCCTCGTAGAGTCAGTGCTGTGGACAGCACCCACCACAGGAAAGTAGCCATGCCTGGAACCGGGGACAGCAGCACTTCAGTGGGCATTTTAAGTAAAAAGACAGCCTGTTTGTCTCCCCAGCAGTCAGCACAGCCATGTCACGGTTATTACTACTGCTTGGGAAGAAAAGCACTGCTCATTTTAGAAAGCTGTCTGTCAGGGTGCTTAAAATAAAAGCAGGCCTGGCACTGGGGGAAAGTCACCAGGGAAAGACATCTTCAGTCTTGTGCAGCACAGGCACCATGGATGTCACTGTGGTAGAACAGTGCTGTCCCCAGGAGTGTGCATTTCCACAGTCCTCTATACATTGGGTGTGCCTTGTGGTTCTAGGCCTGGGGACACATCATGAACCAAGAGGACATGGTGTAGAAAGGCTGTGGGGAGAGAACATGGTGAGCAGGAAAGTGGACAGGGCCGTGGGGAGGGGAGGAGGGCACTGAGCAGGAGAGTGGAGTGGGGCTCGCTGGGGAAGAAGAACTTGATCAGCCTGTCTTCCCTGCTGCCATGAAGCATGGAGCCACAACCTTCACTACCGGGTGAAAGTCTGTCAGGGCCAAACTCGCCTCTGGACGCGAGGGATCCTGGGCCAGCTTGCCTGGCTGCAGAGCTGTCCTCACGCTGTGGTACAACTCCCGGGTGACCCTCACTGGTCCCTGGCCTAGACTGGCCCTCCCAATTGCCCACAGAGTTTGCCTCGCTGCTGCTGTGGGCCTGCCGGCCACCAGTGTGTCACAGTGTCCCACTGAGGCCAGAGACCAGCAAGTCTGTGCGTGTTGGGCTTGTGTTGATTATTCTTCTCAGAGTTAATGATTTTCTCTGGCATGTTTTCTTTGGTTTTAACTATATTTGTGATGACAAGAATTTCCACTGCCTGTGAGATATCTCAGCAGGTGAAGGTGCCTGCTGCCAGGCCTGGCACCCTGAGTTTGATCTCCAGGACCCATGAGATGGGAGCACACACTCTTACACACACACAGACACACACACACACACACACACACACACACACACATCACCACCACCACCACCACCACCACCACCACCAAGTAAATAAGGAAATGTTTTTAAATTTTTTTCAGAGTCTCTAATGAGGACAATCAGATAAACCATTAATTTCAATATACCTCTCACTAGTCAACTCCTAATAATTTGGGGTATCCAGGCCTGCGGGGACTGGGGTGTCTATGACTAGCCCCTTTTTTTTTCAAAATGAGCTTTGAGGCCCAAGGAGAGTGATGGGACCAAGGACAGCAGTCCCGCCTGTGTCTCTGGAGCCTCCTGTGCACCTAAGGCTATGGGGCCCCTGGCCCACCTTTCTGAGAAGTCAGGAGACCTGACAGGTCCCCAGAAGAGCTGAGAAGGCCAGAGCAAGGGGCAGCCTGCAGGAGAGCCAGCAGGGCAGAGCCTGGGTGAGAAGCATGGAGACAGATGAAATCATCGCACCCTTGCCAAGTGTCACACGCTGTCCCTCTCCCATGCTTCCTCCTGTCCAGATGTTTGGTTGCCAGAATGTTCCACACTCTCCTCATCTCCAGGCCTGTACCCTCTTGCCTTCAATGACCCCTCCCTGTTACGACTCTGCTAATTTCCCTATTTGAGATTTTAATTTAGGTGTGGGGAGGAGGGGTGCAGGGGAATCCCAACAGGGCTGTCGTTTAGGAAGCTATCAGCTTCTGGCTAACGGTGACTGTTCCTCATCCTAG
Seq C2 exon
GTGACAGACCATGCCACCACTGCCCTGCTTCACTATCAGTTACCCCAGATGCCAGACGTTGTGGTCAGGTCCTTCATG
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000013933:ENSRNOT00000019157:6
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF115713=Med27=FE(14.9=100)
A:
NA
C2:
PF115713=Med27=FE(28.7=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]